Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 6.1e-177 624.0 307 100.0
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 6.7e-176 620.5 307 99.3
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 1.5e-175 619.4 307 99.0
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 5.7e-175 617.5 307 98.7
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 5.7e-175 617.5 307 98.7
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 1.9e-170 602.4 307 96.1
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 1.3e-155 553.1 298 88.9
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 1.8e-152 542.7 307 84.7
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 2.3e-152 542.3 307 85.0
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 1.3e-150 536.6 307 84.0
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 1.7e-150 536.2 306 84.3
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 1.4e-149 533.1 301 85.0
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 1.2e-148 530.0 306 84.3
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 1.2e-148 530.0 301 84.7
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 1.2e-148 530.0 306 84.0
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 1.2e-148 530.0 307 82.7
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 3.5e-148 528.5 307 82.7
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 1.7e-147 526.2 301 84.1
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 6.5e-147 524.2 303 81.8
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 8.5e-147 523.9 306 83.3
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 1.5e-146 523.1 298 83.9
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 3.2e-146 521.9 307 82.4
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 5.5e-146 521.2 307 80.5
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 1.2e-145 520.0 303 82.2
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 1.2e-145 520.0 293 83.3
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 4.7e-145 518.1 306 81.0
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 4.7e-145 518.1 300 82.7
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 8.0e-145 517.3 306 82.0
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 1.0e-144 516.9 303 80.5
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 1.8e-144 516.2 300 80.7
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 2.3e-144 515.8 306 81.0
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 4.0e-144 515.0 306 80.7
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 1.2e-143 513.5 300 80.0
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 1.5e-143 513.1 306 80.1
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 2.0e-143 512.7 306 80.4
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 5.7e-143 511.1 302 80.1
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 5.7e-143 511.1 306 80.4
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 7.5e-143 510.8 317 77.0
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 1.3e-142 510.0 315 77.5
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 1.7e-142 509.6 298 79.9
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 2.2e-142 509.2 303 77.6
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 4.9e-142 508.1 291 82.8
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 8.3e-142 507.3 306 79.7
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 1.4e-141 506.5 302 79.5
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 1.4e-141 506.5 303 79.2
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 2.4e-141 505.8 324 76.5
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 4.1e-141 505.0 289 82.7
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 5.4e-141 504.6 306 79.4
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 1.2e-140 503.4 278 87.1
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 3.5e-140 501.9 301 79.7
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 3.5e-140 501.9 306 79.7
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 2.3e-139 499.2 324 75.6
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 8.6e-139 497.3 303 78.9
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 2.5e-138 495.7 307 78.8
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 2.8e-137 492.3 303 76.6
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 2.8e-137 492.3 298 76.5
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 4.0e-136 488.4 302 75.8
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 4.0e-136 488.4 260 89.2
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 6.8e-136 487.6 302 76.2
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 6.8e-136 487.6 292 76.4
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 1.5e-135 486.5 354 67.5
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 3.4e-135 485.3 303 77.2
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 3.4e-135 485.3 299 75.6
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 7.5e-135 484.2 292 76.4
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 2.2e-134 482.6 292 76.0
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 2.9e-134 482.3 302 75.2
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 4.9e-134 481.5 299 75.6
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 4.9e-134 481.5 337 70.6
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 6.4e-134 481.1 298 75.5
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 8.3e-134 480.7 301 77.4
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 1.1e-133 480.3 299 75.6
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 2.4e-133 479.2 296 76.7
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 5.4e-133 478.0 307 72.0
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 5.4e-133 478.0 300 75.0
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 7.0e-133 477.6 296 76.4
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 9.2e-133 477.2 296 76.4
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 2.0e-132 476.1 296 76.0
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 2.0e-132 476.1 296 76.0
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 2.0e-132 476.1 295 78.0
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 7.8e-132 474.2 299 75.6
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 1.0e-131 473.8 307 71.3
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 3.0e-131 472.2 299 74.9
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 1.5e-130 469.9 292 74.3
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 4.7e-129 464.9 301 72.8
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 3.1e-128 462.2 321 70.1
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 1.3e-126 456.8 296 70.9
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 3.7e-126 455.3 299 71.6
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 1.2e-124 450.3 303 74.9
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 1.2e-124 450.3 300 69.7
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 3.9e-123 445.3 300 71.3
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 3.6e-121 438.7 290 70.3
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 1.4e-120 436.8 268 74.3
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 1.7e-115 419.9 297 68.0
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 6.8e-104 381.3 224 78.6
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 3.8e-102 375.6 302 59.6
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 2.7e-100 369.4 294 58.8
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 6.2e-97 358.2 202 84.7
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 6.9e-96 354.8 300 59.0
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 1.9e-93 346.7 287 59.9
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 1.6e-92 343.6 204 76.5
Phvul.003G283200 Phaseolus vulgaris HOM05D006814 ORTHO05D008613 2.6e-87 326.2 198 75.3
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 4.5e-79 298.9 187 75.4
Nitab4.5_0025014g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 1.8e-72 276.9 170 79.4
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 6.5e-70 268.5 259 51.0
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 1.7e-62 243.8 145 77.9
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 9.4e-61 238.0 151 72.2
DCAR_021700 Daucus carota HOM05D006814 ORTHO05D013862 2.6e-55 219.9 152 71.7
Hma1.2p1_0572F.1_g181150 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 1.6e-52 210.7 142 75.4
CAN.G298.53 Capsicum annuum HOM05D006814 ORTHO05D008613 3.1e-40 169.9 109 74.3
CAN.G298.50 Capsicum annuum HOM05D006814 ORTHO05D008613 5.0e-38 162.5 100 76.0
Actinidia25984 Actinidia chinensis HOM05D006814 ORTHO05D008613 2.2e-30 137.1 79 84.8
CAN.G2435.1 Capsicum annuum HOM05D006814 ORTHO05D008613 2.9e-30 136.7 83 78.3
Hma1.2p1_0586F.1_g183890 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 1.8e-27 127.5 121 59.5
Glyma.10G145666 Glycine max HOM05D006814 ORTHO05D008613 2.8e-25 120.2 73 74.0
Actinidia25985 Actinidia chinensis HOM05D006814 ORTHO05D008613 4.9e-25 119.4 75 80.0
Cre03.g162250 Chlamydomonas reinhardtii HOM05D006814 ORTHO05D008613 7.0e-24 115.5 332 25.9
PRCOL_00006064 Prasinoderma coloniale HOM05D006814 ORTHO05D008613 1.7e-22 110.9 326 26.4
MCO03G144 Micromonas commoda HOM05D006814 ORTHO05D008613 2.1e-20 104.0 296 24.0
EL10As1g23070 Beta vulgaris HOM05D006814 ORTHO05D088401 1.2e-10 71.6 41 78.0


User provided reference genes

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