Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G0546 Fragaria x ananassa HOM05D000086 ORTHO05D008850 1.7e-71 272.7 151 100.0
FAN15G0266 Fragaria x ananassa HOM05D000086 ORTHO05D008850 2.4e-70 268.9 149 99.3
FAN26G1015 Fragaria x ananassa HOM05D000086 ORTHO05D008850 9.3e-70 266.9 149 98.7
FvH4_2g07470 Fragaria vesca HOM05D000086 ORTHO05D008850 2.5e-67 258.8 149 94.6
FAN20G3002 Fragaria x ananassa HOM05D000086 ORTHO05D008850 3.6e-66 255.0 153 94.1
FAN24G2519 Fragaria x ananassa HOM05D000086 ORTHO05D008850 3.1e-65 251.9 149 93.3
FAN15G3295 Fragaria x ananassa HOM05D000086 ORTHO05D008850 1.5e-64 249.6 149 88.6
FAN27G2679 Fragaria x ananassa HOM05D000086 ORTHO05D008850 8.4e-63 243.8 150 87.3
MD10G1085100 Malus domestica HOM05D000086 ORTHO05D008850 4.0e-49 198.4 148 73.6
Prupe.8G108300 Prunus persica HOM05D000086 ORTHO05D008850 1.3e-47 193.4 138 79.0
Haze_02439 Corylus avellana HOM05D000086 ORTHO05D008850 1.1e-43 180.3 134 71.6
Cfa004962 Carpinus fangiana HOM05D000086 ORTHO05D008850 1.3e-42 176.8 133 70.7
CANSAT21G1787 Cannabis sativa HOM05D000086 ORTHO05D008850 2.1e-42 176.0 139 69.1
CiPaw.06G138700 Carya illinoinensis HOM05D000086 ORTHO05D008850 6.5e-39 164.5 133 64.7
QL11p039592 Quercus lobata HOM05D000086 ORTHO05D008850 6.5e-39 164.5 140 65.0
Actinidia00484 Actinidia chinensis HOM05D000086 ORTHO05D008850 1.0e-36 157.1 128 67.2
CsaV3_2G014360 Cucumis sativus L. HOM05D000086 ORTHO05D008850 1.0e-36 157.1 135 66.7
Nitab4.5_0003816g0030 Nicotiana tabacum HOM05D000086 ORTHO05D008850 1.3e-36 156.8 134 63.4
PGSC0003DMG400025175 Solanum tuberosum HOM05D000086 ORTHO05D008850 5.1e-36 154.8 125 65.6
Sopen01g051390 Solanum pennellii HOM05D000086 ORTHO05D008850 1.5e-35 153.3 134 61.9
Glyma.11G122400 Glycine max HOM05D000086 ORTHO05D008850 2.5e-35 152.5 136 65.4
MELO3C021942.2 Cucumis melo HOM05D000086 ORTHO05D008850 4.3e-35 151.8 135 64.4
ClCG09G017770 Citrullus lanatus HOM05D000086 ORTHO05D008850 5.7e-35 151.4 133 65.4
Nitab4.5_0003281g0010 Nicotiana tabacum HOM05D000086 ORTHO05D008850 5.7e-35 151.4 134 61.9
Dinv23571 Davidia involucrata HOM05D000086 ORTHO05D008850 4.8e-34 148.3 125 64.0
Oeu010564.1 Olea europaea HOM05D000086 ORTHO05D008850 8.2e-34 147.5 123 66.7
Glyma.12G047300 Glycine max HOM05D000086 ORTHO05D008850 3.1e-33 145.6 155 57.4
Lalb_Chr01g0002901 Lupinus albus HOM05D000086 ORTHO05D008850 4.1e-33 145.2 132 59.1
Manes.15G146300 Manihot esculenta HOM05D000086 ORTHO05D008850 1.5e-32 143.3 139 61.2
PSO700G0134 Papaver somniferum HOM05D000086 ORTHO05D008850 1.5e-32 143.3 133 59.4
CSS0026802 Camellia sinensis var. sinensis HOM05D000086 ORTHO05D008850 2.0e-32 142.9 141 58.2
TAR628G1553 Trochodendron aralioides HOM05D000086 ORTHO05D008850 5.9e-32 141.4 136 58.8
Phvul.011G049300 Phaseolus vulgaris HOM05D000086 ORTHO05D008850 7.7e-32 141.0 122 65.6
VMungo1127G1469 Vigna mungo HOM05D000086 ORTHO05D008850 7.7e-32 141.0 129 62.8
Sed0000443 Sechium edule HOM05D000086 ORTHO05D008850 1.0e-31 140.6 129 63.6
Hma1.2p1_0584F.1_g183330 Hydrangea macrophylla HOM05D000086 ORTHO05D008850 1.7e-31 139.8 130 60.0
CSS0017550 Camellia sinensis var. sinensis HOM05D000086 ORTHO05D008850 2.2e-31 139.4 131 59.5
Dinv42102 Davidia involucrata HOM05D000086 ORTHO05D008850 2.9e-31 139.0 155 54.2
PSO170G0004 Papaver somniferum HOM05D000086 ORTHO05D008850 2.9e-31 139.0 139 57.6
Migut.B00283 Erythranthe guttata HOM05D000086 ORTHO05D008850 4.2e-30 135.2 116 63.8
SGA_v2.0_scaffold58G20587 Striga asiatica HOM05D000086 ORTHO05D008850 4.2e-30 135.2 123 62.6
AUR62016674 Chenopodium quinoa HOM05D000086 ORTHO05D008850 7.2e-30 134.4 125 61.6
Sabra04G0099100 Salix brachista HOM05D000086 ORTHO05D008850 9.4e-30 134.0 128 61.7
Duzib052G1244 Durio zibethinus HOM05D000086 ORTHO05D008850 1.2e-29 133.7 120 63.3
Potri.009G110000 Populus trichocarpa HOM05D000086 ORTHO05D008850 1.6e-29 133.3 127 61.4
Sc18g0004740 Simmondsia chinensis HOM05D000086 ORTHO05D008850 2.1e-29 132.9 120 65.0
arahy.Tifrunner.gnm1.ann1.CN40UY Arachis hypogaea HOM05D000086 ORTHO05D008850 2.7e-29 132.5 131 60.3
Rhsim11G0171800 Rhododendron simsii HOM05D000086 ORTHO05D008850 3.6e-29 132.1 117 64.1
arahy.Tifrunner.gnm1.ann1.IR3FU7 Arachis hypogaea HOM05D000086 ORTHO05D008850 1.4e-28 130.2 169 53.3
EL10Ac9g21779 Beta vulgaris HOM05D000086 ORTHO05D008850 1.8e-28 129.8 127 56.7
Cc02_g18090 Coffea canephora HOM05D000086 ORTHO05D008850 1.8e-28 129.8 119 58.8
MSTRG.20116 Avicennia marina HOM05D000086 ORTHO05D008850 3.0e-28 129.0 117 61.5
unitig_21.g20768 Utricularia gibba HOM05D000086 ORTHO05D008850 3.9e-28 128.6 133 53.4
Ah.01g019760 Amaranthus hybridus HOM05D000086 ORTHO05D008850 5.1e-28 128.3 125 58.4
TWI79G0178 Tripterygium wilfordii HOM05D000086 ORTHO05D008850 5.7e-27 124.8 122 59.8
Solyc01g109200.4 Solanum lycopersicum HOM05D000086 ORTHO05D008850 2.2e-26 122.9 106 63.2
Aqoxy5G01742 Aquilegia oxysepala HOM05D000086 ORTHO05D008850 3.7e-26 122.1 131 55.7
Ca_16713_v3 Cicer arietinum L. HOM05D000086 ORTHO05D008850 3.7e-26 122.1 121 57.9
Psat5g076520 Pisum sativum HOM05D000086 ORTHO05D008850 3.7e-26 122.1 132 56.8
Ciclev10029919m.g Citrus clementina HOM05D000086 ORTHO05D008850 6.3e-26 121.3 113 61.1
Lsat_1_v5_gn_7_88601 Lactuca sativa HOM05D000086 ORTHO05D008850 4.1e-25 118.6 140 51.4
Medtr3g091620 Medicago truncatula HOM05D000086 ORTHO05D008850 1.5e-24 116.7 119 57.1
PGR042G3812 Punica granatum HOM05D000086 ORTHO05D008850 1.5e-24 116.7 128 57.0
BcaB04g19012 Brassica carinata HOM05D000086 ORTHO05D008850 5.9e-24 114.8 130 51.5
BcaC01g03667 Brassica carinata HOM05D000086 ORTHO05D008850 1.0e-23 114.0 118 56.8
BolC3t17284H Brassica oleracea HOM05D000086 ORTHO05D008850 1.0e-23 114.0 118 56.8
Lj3g0019268 Lotus japonicus HOM05D000086 ORTHO05D008850 1.7e-23 113.2 97 61.9
C03p49900 Brassica napus HOM05D000086 ORTHO05D008850 2.2e-23 112.8 118 55.9
HanXRQChr16g0504901 Helianthus annuus HOM05D000086 ORTHO05D008850 2.5e-22 109.4 131 49.6
ECA236G2444 Erigeron canadensis HOM05D000086 ORTHO05D008850 2.1e-21 106.3 135 48.1
AUR62011386 Chenopodium quinoa HOM05D000086 ORTHO05D008850 4.7e-21 105.1 109 56.0
DCAR_029004 Daucus carota HOM05D000086 ORTHO05D008850 3.9e-20 102.1 106 53.8
Aa31LG8G5770 Aethionema arabicum HOM05D000086 ORTHO05D008850 1.1e-19 100.5 142 48.6
THA.LOC104808448 Tarenaya hassleriana HOM05D000086 ORTHO05D008850 1.5e-19 100.1 145 45.5
CDE07G1224 Ceratophyllum demersum HOM05D000086 ORTHO05D008850 3.3e-19 99.0 127 47.2
BcaB06g25944 Brassica carinata HOM05D000086 ORTHO05D008850 5.7e-19 98.2 167 42.5
C05p46530 Brassica napus HOM05D000086 ORTHO05D008850 5.7e-19 98.2 138 46.4
BolC5t33382H Brassica oleracea HOM05D000086 ORTHO05D008850 5.7e-19 98.2 167 42.5
A05p30650 Brassica napus HOM05D000086 ORTHO05D008850 6.3e-18 94.7 166 42.8
BraA05t21907Z Brassica rapa HOM05D000086 ORTHO05D008850 6.3e-18 94.7 166 42.8
FAN05G0118 Fragaria x ananassa HOM05D000514 ORTHO05D000222 6.3e-18 94.7 62 100.0
Carub.0003s1875 Capsella rubella HOM05D000086 ORTHO05D008850 5.3e-17 91.7 140 45.7
AL3G32320 Arabidopsis lyrata HOM05D000086 ORTHO05D008850 7.0e-17 91.3 140 44.3
AT3G18930 Arabidopsis thaliana HOM05D000086 ORTHO05D008850 7.0e-17 91.3 140 43.6
CARHR094350 Cardamine hirsuta HOM05D000086 ORTHO05D008850 7.0e-17 91.3 142 45.1
BcaB06g25945 Brassica carinata HOM05D000086 ORTHO05D008850 4.5e-16 88.6 142 43.0
Sp3g17020 Schrenkiella parvula HOM05D000086 ORTHO05D008850 5.9e-16 88.2 172 40.1
Thhalv10020783m.g Eutrema salsugineum HOM05D000086 ORTHO05D008850 1.0e-15 87.4 138 42.8
TAR628G0842 Trochodendron aralioides HOM05D000086 ORTHO05D008850 6.5e-15 84.7 106 49.1
TPR.G19369 Trifolium pratense HOM05D000086 ORTHO05D008850 2.5e-14 82.8 97 50.5
Atru.chr5.2907 Acer truncatum HOM05D000086 ORTHO05D008850 2.1e-13 79.7 83 55.4
Gorai.002G214100 Gossypium raimondii HOM05D000086 ORTHO05D008850 6.1e-13 78.2 150 46.0
Gohir.A01G181400 Gossypium hirsutum HOM05D000086 ORTHO05D008850 3.0e-12 75.9 121 44.6
ATR0733G189 Amborella trichopoda HOM05D000086 ORTHO05D008850 5.2e-12 75.1 130 42.3
HPP92_022018 Vanilla planifolia HOM05D000157 ORTHO05D008850 1.2e-11 73.9 129 37.2
HPP92_022023 Vanilla planifolia HOM05D000157 ORTHO05D008850 1.2e-11 73.9 129 37.2
MBI16_g13168_MAGBIO Magnolia biondii HOM05D000086 ORTHO05D008850 3.3e-11 72.4 135 38.5
Thecc.02G029800 Theobroma cacao HOM05D000086 ORTHO05D008850 1.7e-10 70.1 65 60.0
Duzib132G0561 Durio zibethinus HOM05D000086 ORTHO05D008850 2.8e-10 69.3 65 60.0
SGA_v2.0_scaffold327G48779 Striga asiatica HOM05D000086 ORTHO05D008850 6.3e-10 68.2 60 56.7
Zm00001eb030780 Zea mays HOM05D000086 ORTHO05D008850 5.3e-09 65.1 114 39.5
Duzib248G0960 Durio zibethinus HOM05D000086 ORTHO05D008850 1.6e-08 63.5 116 40.5
Sabra09G0084100 Salix brachista HOM05D007602 ORTHO05D009086 1.6e-08 63.5 81 48.1
CSS0012086 Camellia sinensis var. sinensis HOM05D000086 ORTHO05D000431 1.5e-06 57.0 124 33.1
CSS0027352 Camellia sinensis var. sinensis HOM05D000086 ORTHO05D000431 1.5e-06 57.0 112 35.7
MD00G1071800 Malus domestica HOM05D000086 ORTHO05D000431 2.5e-06 56.2 124 36.3
Nitab4.5_0000256g0140 Nicotiana tabacum HOM05D000086 ORTHO05D000431 3.2e-06 55.8 125 33.6
SEGI_28500 Sequoiadendron giganteum HOM05D000086 ORTHO05D000431 4.2e-06 55.5 129 33.3
Sopen06g021450 Solanum pennellii HOM05D000086 ORTHO05D000431 5.5e-06 55.1 113 31.9
Sopen06g021460 Solanum pennellii HOM05D000086 ORTHO05D000431 5.5e-06 55.1 113 31.9
Sopen06g021470 Solanum pennellii HOM05D000086 ORTHO05D000431 5.5e-06 55.1 113 31.9


User provided reference genes

Program Settings