Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN18G0149 Fragaria x ananassa HOM05D004532 ORTHO05D000028 2.5e-86 322.0 156 100.0
FvH4_5g38110 Fragaria vesca HOM05D004532 ORTHO05D000028 3.7e-82 308.1 153 97.4
FAN26G0189 Fragaria x ananassa HOM05D004532 ORTHO05D000028 3.7e-82 308.1 154 98.1
FAN27G1735 Fragaria x ananassa HOM05D004532 ORTHO05D000028 3.7e-82 308.1 154 98.1
FAN19G0322 Fragaria x ananassa HOM05D004532 ORTHO05D000028 6.4e-82 307.4 153 97.4
FAN18G3338 Fragaria x ananassa HOM05D004532 ORTHO05D000028 1.4e-81 306.2 154 97.4
RcHm_v2.0_Chr7g0240061 Rosa chinensis HOM05D004532 ORTHO05D000028 1.4e-81 306.2 153 96.1
FAN09G2363 Fragaria x ananassa HOM05D004532 ORTHO05D000028 3.2e-81 305.1 154 96.8
FAN04G1122 Fragaria x ananassa HOM05D004532 ORTHO05D000028 4.1e-81 304.7 154 96.8
FAN13G0077 Fragaria x ananassa HOM05D004532 ORTHO05D000028 4.1e-81 304.7 154 96.8
FAN28G0341 Fragaria x ananassa HOM05D004532 ORTHO05D000028 7.1e-81 303.9 154 96.8
FAN08G2891 Fragaria x ananassa HOM05D004532 ORTHO05D000028 9.2e-81 303.5 154 96.1
FAN05G4307 Fragaria x ananassa HOM05D004532 ORTHO05D000028 1.6e-80 302.8 153 96.7
FAN19G2565 Fragaria x ananassa HOM05D004532 ORTHO05D000028 2.7e-80 302.0 153 96.7
FAN24G1193 Fragaria x ananassa HOM05D004532 ORTHO05D000028 1.0e-79 300.1 165 91.5
FAN18G3329 Fragaria x ananassa HOM05D004532 ORTHO05D000028 1.3e-79 299.7 154 95.5
FAN19G2172 Fragaria x ananassa HOM05D004532 ORTHO05D000028 1.3e-79 299.7 154 96.1
FAN24G0851 Fragaria x ananassa HOM05D004532 ORTHO05D000028 8.6e-79 297.0 153 96.1
Prupe.1G511300 Prunus persica HOM05D004532 ORTHO05D000028 4.8e-61 238.0 154 81.2
FAN14G3786 Fragaria x ananassa HOM05D004532 ORTHO05D000028 3.2e-57 225.3 116 97.4
MD15G1362500 Malus domestica HOM05D004532 ORTHO05D000028 6.0e-56 221.1 155 73.5
MD08G1177100 Malus domestica HOM05D004532 ORTHO05D000028 1.1e-41 173.7 155 64.5
Ciclev10003964m.g Citrus clementina HOM05D004532 ORTHO05D000028 2.7e-32 142.5 156 51.3
Manes.02G156400 Manihot esculenta HOM05D004532 ORTHO05D000028 9.7e-30 134.0 155 52.9
Haze_00565 Corylus avellana HOM05D004532 ORTHO05D000028 1.3e-26 123.6 148 50.0
Phvul.008G170400 Phaseolus vulgaris HOM05D004532 ORTHO05D000028 1.0e-23 114.0 144 47.9
Atru.chr13.1272 Acer truncatum HOM05D004532 ORTHO05D000028 2.3e-23 112.8 138 50.7
CiPaw.06G022500 Carya illinoinensis HOM05D004532 ORTHO05D000028 7.4e-22 107.8 142 45.8
Glyma.13G086400 Glycine max HOM05D004532 ORTHO05D000028 7.4e-22 107.8 155 47.7
Sabra02G0072700 Salix brachista HOM05D004532 ORTHO05D000028 7.4e-22 107.8 160 45.0
Glyma.14G168700 Glycine max HOM05D004532 ORTHO05D000028 9.7e-22 107.5 144 46.5
Potri.002G092300 Populus trichocarpa HOM05D004532 ORTHO05D000028 2.8e-21 105.9 156 44.9
Nn1g08850 Nelumbo nucifera HOM05D004532 ORTHO05D000028 5.3e-20 101.7 154 42.9
Psat2g075120 Pisum sativum HOM05D004532 ORTHO05D000028 1.5e-19 100.1 159 40.3
TWI36G0956 Tripterygium wilfordii HOM05D004532 ORTHO05D000028 2.0e-19 99.8 159 46.5
Lj1g0009703 Lotus japonicus HOM05D004532 ORTHO05D000028 3.5e-19 99.0 138 44.2
Ca_05235_v3 Cicer arietinum L. HOM05D004532 ORTHO05D000028 2.9e-18 95.9 152 39.5
Gohir.A02G075600 Gossypium hirsutum HOM05D004532 ORTHO05D000028 3.8e-18 95.5 159 42.1
Gohir.D02G082700 Gossypium hirsutum HOM05D004532 ORTHO05D000028 3.8e-18 95.5 158 43.7
Medtr5g061740 Medicago truncatula HOM05D004532 ORTHO05D000028 3.8e-18 95.5 145 40.7
QL12p035808 Quercus lobata HOM05D004532 ORTHO05D000028 6.5e-18 94.7 119 46.2
Medtr4g084740 Medicago truncatula HOM05D004532 ORTHO05D000028 1.1e-17 94.0 156 40.4
Lalb_Chr10g0102161 Lupinus albus HOM05D004532 ORTHO05D000028 1.4e-17 93.6 154 42.9
Gorai.005G093000 Gossypium raimondii HOM05D004532 ORTHO05D000028 4.2e-17 92.0 158 42.4
Eucgr.H00917 Eucalyptus grandis HOM05D004532 ORTHO05D000028 5.5e-17 91.7 156 43.6
Thecc.08G112900 Theobroma cacao HOM05D004532 ORTHO05D000028 7.2e-17 91.3 155 40.6
arahy.Tifrunner.gnm1.ann1.GBX0EQ Arachis hypogaea HOM05D004532 ORTHO05D000028 9.4e-17 90.9 138 42.0
TAR376G0693 Trochodendron aralioides HOM05D004532 ORTHO05D000028 9.4e-17 90.9 140 42.1
GSVIVG01022182001 Vitis vinifera HOM05D004532 ORTHO05D000028 1.6e-16 90.1 155 40.0
arahy.Tifrunner.gnm1.ann1.XXIH72 Arachis hypogaea HOM05D004532 ORTHO05D000028 1.8e-15 86.7 138 41.3
Lalb_Chr23g0270701 Lupinus albus HOM05D004532 ORTHO05D000028 2.3e-15 86.3 155 40.0
TAR629G1408 Trochodendron aralioides HOM05D000042 ORTHO05D000028 3.9e-15 85.5 107 46.7
Carub.0001s2168 Capsella rubella HOM05D004532 ORTHO05D000028 8.8e-15 84.3 154 39.6
Dinv13046 Davidia involucrata HOM05D004532 ORTHO05D000028 2.6e-14 82.8 120 42.5
AL1G35570 Arabidopsis lyrata HOM05D004532 ORTHO05D000028 3.7e-13 79.0 154 37.0
THA.LOC104800165 Tarenaya hassleriana HOM05D004532 ORTHO05D000028 8.2e-13 77.8 155 34.8
AT1G22130 Arabidopsis thaliana HOM05D004532 ORTHO05D000028 1.4e-12 77.0 149 37.6
BcaB03g14232 Brassica carinata HOM05D004532 ORTHO05D000028 1.8e-12 76.6 154 37.0
CARHR022480 Cardamine hirsuta HOM05D004532 ORTHO05D000028 7.0e-12 74.7 154 36.4
BcaC06g34931 Brassica carinata HOM05D004532 ORTHO05D000028 9.1e-12 74.3 155 37.4
A07p14740 Brassica napus HOM05D004532 ORTHO05D000028 9.1e-12 74.3 155 36.8
C07p21680 Brassica napus HOM05D004532 ORTHO05D000028 9.1e-12 74.3 155 37.4
BraA07t29219Z Brassica rapa HOM05D004532 ORTHO05D000028 9.1e-12 74.3 155 36.8
BolC8t49778H Brassica oleracea HOM05D004532 ORTHO05D000028 1.6e-11 73.6 156 35.3
BraA08t34789Z Brassica rapa HOM05D004532 ORTHO05D000028 1.6e-11 73.6 154 34.4
Thhalv10008637m.g Eutrema salsugineum HOM05D004532 ORTHO05D000028 1.6e-11 73.6 154 34.4
BolC7t42699H Brassica oleracea HOM05D004532 ORTHO05D000028 2.0e-11 73.2 155 36.8
A08p28590 Brassica napus HOM05D003920 ORTHO05D004877 2.6e-11 72.8 154 33.8
BcaC07g39146 Brassica carinata HOM05D004532 ORTHO05D000028 3.5e-11 72.4 154 33.8
C08p21390 Brassica napus HOM05D004532 ORTHO05D000028 3.5e-11 72.4 154 33.8
PSO210G0302 Papaver somniferum HOM05D004532 ORTHO05D000028 1.0e-10 70.9 137 38.7
PSO447G0055 Papaver somniferum HOM05D004532 ORTHO05D000028 1.0e-10 70.9 148 37.2
COL.COLO4_16480 Corchorus olitorius HOM05D004532 ORTHO05D000028 3.8e-10 68.9 156 35.9
Thecc.01G107200 Theobroma cacao HOM05D004532 ORTHO05D000028 3.8e-10 68.9 148 36.5
Cpa.g.sc66.98 Carica papaya HOM05D004532 ORTHO05D000028 1.6e-08 63.5 113 35.4
QL06p050456 Quercus lobata HOM05D004532 ORTHO05D000028 2.1e-08 63.2 141 32.6
Sp1g19630 Schrenkiella parvula HOM05D004532 ORTHO05D000028 2.1e-08 63.2 87 42.5
COL.COLO4_03634 Corchorus olitorius HOM05D004532 ORTHO05D000028 4.7e-08 62.0 155 31.0
Sp5g33120 Schrenkiella parvula HOM05D004532 ORTHO05D000028 1.8e-07 60.1 154 33.8
ClCG07G009420 Citrullus lanatus HOM05D004532 ORTHO05D000028 2.3e-07 59.7 155 32.3
AT1G77980 Arabidopsis thaliana HOM05D004532 ORTHO05D000028 8.8e-07 57.8 158 30.4
Carub.0002s2487 Capsella rubella HOM05D004532 ORTHO05D000028 1.2e-06 57.4 161 32.3


User provided reference genes

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