Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 9.5e-267 922.9 461 100.0
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.0e-264 915.2 462 99.4
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 2.3e-257 891.7 461 97.0
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 3.1e-249 864.8 461 94.8
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 1.4e-246 855.9 460 93.5
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 6.0e-237 823.9 463 87.5
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 1.8e-233 812.4 458 85.8
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 6.9e-233 810.4 465 86.2
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 7.6e-232 807.0 509 83.3
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 2.2e-231 805.4 458 85.4
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 1.1e-230 803.1 434 88.5
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 1.4e-230 802.7 465 84.9
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 1.9e-230 802.4 466 85.0
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 5.4e-230 800.8 453 86.3
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 7.1e-230 800.4 459 86.5
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 9.3e-230 800.0 452 85.2
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 4.6e-229 797.7 433 87.8
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 1.0e-228 796.6 460 84.8
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 1.0e-228 796.6 462 84.2
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 1.3e-228 796.2 461 84.8
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 1.7e-228 795.8 467 83.9
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 3.9e-228 794.7 432 88.0
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 8.7e-228 793.5 432 87.5
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 8.7e-228 793.5 464 84.3
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 1.1e-227 793.1 433 87.5
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 1.1e-227 793.1 455 84.8
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 1.9e-227 792.3 431 87.9
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 2.5e-227 792.0 431 86.8
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 5.6e-227 790.8 461 81.8
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 7.3e-227 790.4 465 83.2
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 1.3e-226 789.6 463 83.6
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 1.6e-226 789.3 462 84.2
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 8.1e-226 786.9 452 83.4
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 8.1e-226 786.9 431 87.2
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 1.1e-225 786.6 437 86.0
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 2.4e-225 785.4 462 84.4
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 1.5e-224 782.7 460 82.8
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 1.5e-224 782.7 464 81.9
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 2.0e-224 782.3 462 82.5
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 3.4e-224 781.6 462 81.8
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 7.6e-224 780.4 462 82.3
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 9.9e-224 780.0 465 81.5
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 1.3e-223 779.6 434 85.3
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 1.7e-223 779.2 456 82.7
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 1.7e-223 779.2 462 81.4
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 2.2e-223 778.9 425 87.5
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 3.8e-223 778.1 426 86.4
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 3.8e-223 778.1 432 86.1
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 6.4e-223 777.3 451 83.1
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 6.4e-223 777.3 432 84.5
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 8.4e-223 776.9 455 81.5
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 1.9e-222 775.8 424 87.7
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 2.4e-222 775.4 462 81.4
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 4.2e-222 774.6 462 81.2
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 7.1e-222 773.9 434 84.6
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 7.1e-222 773.9 465 80.6
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 1.2e-221 773.1 460 81.5
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 2.1e-221 772.3 456 81.6
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 2.7e-221 771.9 451 82.3
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 4.6e-221 771.2 437 82.6
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 4.6e-221 771.2 455 82.4
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 4.6e-221 771.2 451 82.0
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 4.6e-221 771.2 430 84.9
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 1.3e-220 769.6 432 85.9
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 1.8e-220 769.2 433 83.6
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 1.8e-220 769.2 431 83.8
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 6.7e-220 767.3 465 81.5
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 5.6e-219 764.2 415 86.7
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 2.1e-218 762.3 430 84.4
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 3.4e-216 755.0 433 85.2
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 4.9e-215 751.1 481 75.3
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 1.1e-214 750.0 416 84.4
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 9.3e-214 746.9 423 83.5
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 4.6e-213 744.6 478 78.9
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 7.9e-213 743.8 455 79.6
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 3.3e-211 738.4 422 81.3
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 2.1e-210 735.7 429 81.8
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 2.8e-210 735.3 401 88.3
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 1.4e-209 733.0 427 80.6
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 8.4e-207 723.8 432 79.2
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 1.6e-205 719.5 425 80.9
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 2.1e-205 719.2 494 74.1
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 1.1e-203 713.4 421 79.3
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 3.3e-203 711.8 401 84.3
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 3.3e-203 711.8 418 79.2
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 1.1e-201 706.8 418 79.2
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 2.2e-199 699.1 450 78.0
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 8.5e-199 697.2 382 88.5
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 2.5e-198 695.7 404 86.9
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 7.2e-198 694.1 435 77.5
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 6.7e-196 687.6 488 71.5
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 2.5e-190 669.1 523 67.7
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 9.4e-190 667.2 391 82.6
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 2.1e-189 666.0 461 71.8
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 8.2e-186 654.1 387 81.7
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 2.6e-184 649.0 421 71.5
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 1.2e-181 640.2 357 86.6
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 3.8e-175 618.6 434 71.4
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 7.5e-171 604.4 425 67.8
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 3.1e-169 599.0 421 67.0
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 1.7e-167 593.2 377 78.8
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 4.5e-160 568.5 496 62.1
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 2.8e-141 506.1 272 87.9
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 3.6e-141 505.8 271 88.9
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 4.1e-137 492.3 458 57.6
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 5.4e-137 491.9 276 85.9
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 2.7e-136 489.6 374 63.6
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 3.6e-117 426.0 260 83.1
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 7.7e-67 258.8 189 68.8
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 8.5e-66 255.4 147 83.0
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 2.0e-59 234.2 147 75.5
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 1.1e-41 175.3 97 81.4
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 6.0e-27 126.3 79 72.2
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 1.7e-26 124.8 70 85.7
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 1.3e-18 98.6 57 80.7
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 7.3e-17 92.8 49 89.8
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 1.0e-10 72.4 49 69.4
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 1.0e-10 72.4 42 78.6
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 6.6e-10 69.7 42 73.8
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 2.4e-07 61.2 40 75.0


User provided reference genes

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