Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G2383 Fragaria x ananassa HOM05D005486 ORTHO05D007411 8.2e-243 843.6 516 100.0
FAN22G2135 Fragaria x ananassa HOM05D005486 ORTHO05D007411 2.3e-221 772.3 508 94.9
FAN07G1378 Fragaria x ananassa HOM05D005486 ORTHO05D007411 1.7e-216 756.1 506 92.3
FvH4_4g28440 Fragaria vesca HOM05D005486 ORTHO05D007411 3.8e-208 728.4 509 92.1
FAN12G0975 Fragaria x ananassa HOM05D005486 ORTHO05D007411 3.3e-207 725.3 509 92.1
Prupe.1G301600 Prunus persica HOM05D005486 ORTHO05D007411 7.2e-98 362.1 510 55.5
MD16G1051000 Malus domestica HOM05D005486 ORTHO05D007411 4.4e-87 326.2 513 51.9
MD13G1050300 Malus domestica HOM05D005486 ORTHO05D007411 1.8e-80 304.3 529 53.7
RcHm_v2.0_Chr4g0436391 Rosa chinensis HOM05D005486 ORTHO05D007411 1.7e-78 297.7 201 81.1
QL03p044642 Quercus lobata HOM05D005486 ORTHO05D007411 1.9e-53 214.5 505 44.6
Haze_11801 Corylus avellana HOM05D005486 ORTHO05D007411 3.5e-52 210.3 510 40.6
CANSAT64G2054 Cannabis sativa HOM05D005486 ORTHO05D007411 4.9e-38 163.3 513 32.0
Cfa008789 Carpinus fangiana HOM05D005486 ORTHO05D007411 1.9e-34 151.4 487 37.2
Potri.008G111100 Populus trichocarpa HOM05D005486 ORTHO05D007411 4.3e-34 150.2 365 37.0
Potri.010G132600 Populus trichocarpa HOM05D005486 ORTHO05D007411 5.8e-31 139.8 372 36.3
CiPaw.05G117000 Carya illinoinensis HOM05D005486 ORTHO05D007411 3.9e-27 127.1 518 33.8
Atru.chr11.1428 Acer truncatum HOM05D005486 ORTHO05D007411 1.9e-26 124.8 521 30.3
CSS0021505 Camellia sinensis var. sinensis HOM05D005486 ORTHO05D007411 3.7e-25 120.6 374 32.9
Ciclev10030527m.g Citrus clementina HOM05D005486 ORTHO05D007411 3.1e-24 117.5 327 35.2
GSVIVG01012004001 Vitis vinifera HOM05D005486 ORTHO05D007411 1.5e-23 115.2 368 33.7
PGR119G1261 Punica granatum HOM05D005486 ORTHO05D007411 2.6e-23 114.4 370 34.1
Manes.06G075700 Manihot esculenta HOM05D005486 ORTHO05D007411 5.8e-23 113.2 409 29.8
Sabra10G0101300 Salix brachista HOM05D005486 ORTHO05D007411 1.1e-21 109.0 377 32.9
TAR629G0806 Trochodendron aralioides HOM05D005486 ORTHO05D007411 1.4e-21 108.6 365 32.6
TAR622G0197 Trochodendron aralioides HOM05D005486 ORTHO05D007411 5.5e-21 106.7 369 32.5
Eucgr.G02380 Eucalyptus grandis HOM05D005486 ORTHO05D007411 1.6e-20 105.1 350 29.7
Thecc.02G364500 Theobroma cacao HOM05D005486 ORTHO05D007411 1.3e-19 102.1 282 35.5
Sed0017603 Sechium edule HOM05D005486 ORTHO05D007411 4.8e-17 93.6 331 31.4
ClCG00G003720 Citrullus lanatus HOM05D005486 ORTHO05D007411 1.1e-16 92.4 352 30.1
ClCG05G023220 Citrullus lanatus HOM05D005486 ORTHO05D007411 1.1e-16 92.4 352 30.1
RcHm_v2.0_Chr4g0436401 Rosa chinensis HOM05D005486 ORTHO05D007411 5.3e-16 90.1 54 81.5
Rhsim09G0115000 Rhododendron simsii HOM05D005486 ORTHO05D007411 9.0e-16 89.4 516 26.9
Glyma.01G092400 Glycine max HOM05D005486 ORTHO05D007411 1.0e-14 85.9 398 28.6
Glyma.02G129800 Glycine max HOM05D005486 ORTHO05D007411 1.0e-14 85.9 249 31.7
TWI31G0478 Tripterygium wilfordii HOM05D005486 ORTHO05D007411 1.0e-14 85.9 350 29.1
FvH4_2g19062 Fragaria vesca HOM05D000514 ORTHO05D000222 1.7e-14 85.1 51 88.2
arahy.Tifrunner.gnm1.ann1.S5RRBC Arachis hypogaea HOM05D005486 ORTHO05D007411 2.2e-14 84.7 251 31.9
Nn3g17656 Nelumbo nucifera HOM05D005486 ORTHO05D007411 3.8e-14 84.0 409 28.9
Nitab4.5_0010558g0010 Nicotiana tabacum HOM05D005486 ORTHO05D007411 3.8e-14 84.0 291 29.2
arahy.Tifrunner.gnm1.ann1.HYI70A Arachis hypogaea HOM05D005486 ORTHO05D007411 5.0e-14 83.6 294 30.3
Gohir.D12G176000 Gossypium hirsutum HOM05D005486 ORTHO05D007411 1.1e-13 82.4 232 34.1
Gorai.008G188400 Gossypium raimondii HOM05D005486 ORTHO05D007411 1.9e-13 81.6 232 34.1
TPR.G24201 Trifolium pratense HOM05D005486 ORTHO05D007411 3.2e-13 80.9 301 31.2
CsaV3_5G033800 Cucumis sativus L. HOM05D005486 ORTHO05D007411 4.2e-13 80.5 337 29.4
Nitab4.5_0003073g0050 Nicotiana tabacum HOM05D005486 ORTHO05D007411 5.5e-13 80.1 262 29.4
Sabra08G0084000 Salix brachista HOM05D005486 ORTHO05D007411 9.4e-13 79.3 191 36.1
PGSC0003DMG400025103 Solanum tuberosum HOM05D005486 ORTHO05D007411 9.4e-13 79.3 313 27.8
Actinidia16599 Actinidia chinensis HOM05D005486 ORTHO05D007411 2.1e-12 78.2 334 30.2
Lj2g0014013 Lotus japonicus HOM05D005486 ORTHO05D007411 2.1e-12 78.2 398 28.4
Sopen05g005890 Solanum pennellii HOM05D005486 ORTHO05D007411 3.6e-12 77.4 312 26.0
TWI79G0683 Tripterygium wilfordii HOM05D005486 ORTHO05D007411 6.1e-12 76.6 343 28.3
MELO3C012197.2 Cucumis melo HOM05D005486 ORTHO05D007411 1.0e-11 75.9 337 28.8
Lalb_Chr17g0341801 Lupinus albus HOM05D005486 ORTHO05D007411 1.4e-11 75.5 295 28.1
Peaxi162Scf00198g00414 Petunia axillaris HOM05D005486 ORTHO05D007411 3.0e-11 74.3 316 28.5
Gohir.A12G173400 Gossypium hirsutum HOM05D005486 ORTHO05D007411 3.9e-11 73.9 352 28.4
vmacro10503 Vaccinium macrocarpon HOM05D005486 ORTHO05D007411 6.7e-11 73.2 385 27.8
Oeu041861.2 Olea europaea HOM05D005486 ORTHO05D007411 1.5e-10 72.0 227 30.0
VMungo1215G0217 Vigna mungo HOM05D005486 ORTHO05D007411 1.5e-10 72.0 405 25.7
MSTRG.13492 Avicennia marina HOM05D005486 ORTHO05D007411 2.0e-10 71.6 324 25.6
Dinv16542 Davidia involucrata HOM05D005486 ORTHO05D007411 3.3e-10 70.9 116 35.3
Psat2g089040 Pisum sativum HOM05D005486 ORTHO05D007411 9.7e-10 69.3 291 29.2
Medtr4g012000 Medicago truncatula HOM05D005486 ORTHO05D007411 1.3e-09 68.9 271 31.7
Duzib251G0619 Durio zibethinus HOM05D005486 ORTHO05D007411 2.2e-09 68.2 550 24.0
Dinv16543 Davidia involucrata HOM05D005486 ORTHO05D007411 3.7e-09 67.4 195 34.4
Actinidia32431 Actinidia chinensis HOM05D005486 ORTHO05D007411 1.1e-08 65.9 283 27.2
THA.LOC104808436 Tarenaya hassleriana HOM05D005486 ORTHO05D007411 1.1e-08 65.9 339 29.8
Ca_07880_v3 Cicer arietinum L. HOM05D005486 ORTHO05D007411 2.4e-08 64.7 289 27.0
CAN.G184.62 Capsicum annuum HOM05D005486 ORTHO05D007411 5.3e-08 63.5 314 25.5
Lalb_Chr10g0099591 Lupinus albus HOM05D005486 ORTHO05D007411 5.3e-08 63.5 261 28.0
DCAR_009846 Daucus carota HOM05D005486 ORTHO05D007411 2.0e-07 61.6 243 28.4
Cpa.g.sc1.245 Carica papaya HOM05D005486 ORTHO05D007411 3.4e-07 60.8 182 30.2
EL10Ac6g14546 Beta vulgaris HOM05D005486 ORTHO05D007411 5.9e-07 60.1 322 27.6
ECA234G1298 Erigeron canadensis HOM05D005486 ORTHO05D007411 2.9e-06 57.8 278 25.2
Hma1.2p1_1391F.1_g280150 Hydrangea macrophylla HOM05D005486 ORTHO05D007411 3.8e-06 57.4 178 36.0


User provided reference genes

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