Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G2264 Fragaria x ananassa HOM05D005575 ORTHO05D007355 2.5e-270 934.9 487 100.0
FvH4_4g01960 Fragaria vesca HOM05D005575 ORTHO05D007355 5.5e-249 864.0 487 93.0
FAN22G1081 Fragaria x ananassa HOM05D005575 ORTHO05D007355 6.8e-247 857.1 487 93.2
RcHm_v2.0_Chr4g0388931 Rosa chinensis HOM05D005575 ORTHO05D007355 1.4e-231 806.2 489 86.7
Prupe.1G025500 Prunus persica HOM05D005575 ORTHO05D007355 1.8e-199 699.5 494 76.3
FAN12G1274 Fragaria x ananassa HOM05D005575 ORTHO05D007355 5.2e-199 698.0 402 91.8
Cfa008407 Carpinus fangiana HOM05D005575 ORTHO05D007355 1.7e-194 682.9 489 72.6
Haze_11258 Corylus avellana HOM05D005575 ORTHO05D007355 1.5e-193 679.9 489 73.2
GSVIVG01018083001 Vitis vinifera HOM05D005575 ORTHO05D007355 1.7e-189 666.4 487 72.7
CANSAT78G2185 Cannabis sativa HOM05D005575 ORTHO05D007355 3.8e-189 665.2 487 70.4
QL06p000355 Quercus lobata HOM05D005575 ORTHO05D007355 1.4e-188 663.3 490 72.9
MD16G1218200 Malus domestica HOM05D005575 ORTHO05D007355 1.9e-188 662.9 447 75.6
MD13G1203000 Malus domestica HOM05D005575 ORTHO05D007355 4.2e-188 661.8 447 75.4
Potri.008G159900 Populus trichocarpa HOM05D005575 ORTHO05D007355 1.3e-186 656.8 487 71.3
Manes.03G170700 Manihot esculenta HOM05D005575 ORTHO05D007355 5.1e-186 654.8 489 69.5
TWI53G0136 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 6.6e-186 654.4 489 69.9
MELO3C006485.2 Cucumis melo HOM05D005575 ORTHO05D007355 1.1e-185 653.7 488 70.1
Eucgr.H03187 Eucalyptus grandis HOM05D005575 ORTHO05D007355 4.3e-185 651.7 489 69.5
CsaV3_3G012740 Cucumis sativus L. HOM05D005575 ORTHO05D007355 1.3e-184 650.2 488 70.1
Thecc.04G242000 Theobroma cacao HOM05D005575 ORTHO05D007355 1.3e-184 650.2 489 68.5
CiPaw.01G193100 Carya illinoinensis HOM05D005575 ORTHO05D007355 2.8e-184 649.0 489 69.9
Ca_01767_v3 Cicer arietinum L. HOM05D005575 ORTHO05D007355 2.8e-184 649.0 489 70.3
Dinv44604 Davidia involucrata HOM05D005575 ORTHO05D007355 2.8e-184 649.0 489 71.4
ClCG05G004730 Citrullus lanatus HOM05D005575 ORTHO05D007355 1.1e-183 647.1 488 71.9
Manes.15G034800 Manihot esculenta HOM05D005575 ORTHO05D007355 1.8e-183 646.4 489 68.1
Cc03_g04530 Coffea canephora HOM05D005575 ORTHO05D007355 4.0e-183 645.2 487 69.0
COL.COLO4_13167 Corchorus olitorius HOM05D005575 ORTHO05D007355 4.0e-183 645.2 489 67.3
Nn3g19479 Nelumbo nucifera HOM05D005575 ORTHO05D007355 1.2e-182 643.7 488 71.1
Phvul.007G279400 Phaseolus vulgaris HOM05D005575 ORTHO05D007355 1.2e-182 643.7 489 70.3
Sabra08G0121800 Salix brachista HOM05D005575 ORTHO05D007355 1.5e-182 643.3 514 66.9
VMungo0720G2094 Vigna mungo HOM05D005575 ORTHO05D007355 2.9e-181 639.0 489 70.6
Ciclev10004932m.g Citrus clementina HOM05D005575 ORTHO05D007355 3.8e-181 638.6 439 73.6
COL.COLO4_26929 Corchorus olitorius HOM05D005575 ORTHO05D007355 6.4e-181 637.9 489 66.7
Glyma.02G001600 Glycine max HOM05D005575 ORTHO05D007355 6.4e-181 637.9 489 69.3
Atru.chr4.2312 Acer truncatum HOM05D005575 ORTHO05D007355 2.4e-180 636.0 441 73.0
Medtr1g041115 Medicago truncatula HOM05D005575 ORTHO05D007355 3.2e-180 635.6 489 69.3
Dinv14070 Davidia involucrata HOM05D005575 ORTHO05D007355 7.1e-180 634.4 489 67.3
Lalb_Chr01g0020841 Lupinus albus HOM05D005575 ORTHO05D007355 9.3e-180 634.0 490 69.4
Nitab4.5_0012347g0010 Nicotiana tabacum HOM05D005575 ORTHO05D007355 4.6e-179 631.7 489 68.5
Sed0020385 Sechium edule HOM05D005575 ORTHO05D007355 4.6e-179 631.7 487 67.8
Actinidia08453 Actinidia chinensis HOM05D005575 ORTHO05D007355 6.0e-179 631.3 489 66.9
Psat6g136600 Pisum sativum HOM05D005575 ORTHO05D007355 6.0e-179 631.3 489 69.1
Lj6g0016373 Lotus japonicus HOM05D005575 ORTHO05D007355 7.9e-179 630.9 490 69.4
Gohir.D10G150300 Gossypium hirsutum HOM05D005575 ORTHO05D007355 3.0e-178 629.0 488 66.4
Nitab4.5_0000941g0050 Nicotiana tabacum HOM05D005575 ORTHO05D007355 3.0e-178 629.0 489 69.5
Aa31LG8G9490 Aethionema arabicum HOM05D005575 ORTHO05D007355 3.9e-178 628.6 487 68.0
Glyma.10G001900 Glycine max HOM05D005575 ORTHO05D007355 3.9e-178 628.6 489 69.1
BcaC05g27989 Brassica carinata HOM05D005575 ORTHO05D007355 5.1e-178 628.2 487 68.4
C05p40000 Brassica napus HOM05D005575 ORTHO05D007355 5.1e-178 628.2 487 68.4
BolC5t32746H Brassica oleracea HOM05D005575 ORTHO05D007355 5.1e-178 628.2 487 68.4
Gorai.011G167300 Gossypium raimondii HOM05D005575 ORTHO05D007355 5.1e-178 628.2 488 66.6
TWI09G0420 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 5.1e-178 628.2 487 67.6
BraA05t21452Z Brassica rapa HOM05D005575 ORTHO05D007355 6.7e-178 627.9 487 68.4
Duzib052G1036 Durio zibethinus HOM05D005575 ORTHO05D007355 6.7e-178 627.9 489 66.7
Gohir.A10G117000 Gossypium hirsutum HOM05D005575 ORTHO05D007355 8.7e-178 627.5 488 66.4
HanXRQChr13g0423561 Helianthus annuus HOM05D005575 ORTHO05D007355 8.7e-178 627.5 488 66.6
A05p25710 Brassica napus HOM05D005575 ORTHO05D007355 1.5e-177 626.7 487 68.2
CARHR098930 Cardamine hirsuta HOM05D005575 ORTHO05D007355 1.5e-177 626.7 487 67.4
ECA240G2677 Erigeron canadensis HOM05D005575 ORTHO05D007355 1.9e-177 626.3 488 66.8
Cpa.g.sc58.3 Carica papaya HOM05D005575 ORTHO05D007355 7.4e-177 624.4 487 68.8
Rhsim04G0195700 Rhododendron simsii HOM05D005575 ORTHO05D007355 9.6e-177 624.0 495 67.9
BcaB06g26421 Brassica carinata HOM05D005575 ORTHO05D007355 1.3e-176 623.6 487 68.0
Thhalv10020692m.g Eutrema salsugineum HOM05D005575 ORTHO05D007355 1.4e-175 620.2 487 67.8
arahy.Tifrunner.gnm1.ann1.0U5UXQ Arachis hypogaea HOM05D005575 ORTHO05D007355 1.8e-175 619.8 489 69.1
SalBow3G3314 Salvia bowleyana HOM05D005575 ORTHO05D007355 2.4e-175 619.4 491 67.2
Sp3g20680 Schrenkiella parvula HOM05D005575 ORTHO05D007355 3.1e-175 619.0 487 67.6
PGR004G2878 Punica granatum HOM05D005575 ORTHO05D007355 4.0e-175 618.6 491 67.0
TPR.G32768 Trifolium pratense HOM05D005575 ORTHO05D007355 1.2e-174 617.1 469 69.9
Duzib151G0571 Durio zibethinus HOM05D005575 ORTHO05D007355 2.0e-174 616.3 487 65.5
Carub.0003s2315 Capsella rubella HOM05D005575 ORTHO05D007355 2.6e-174 615.9 487 67.4
AT3G22990 Arabidopsis thaliana HOM05D005575 ORTHO05D007355 3.4e-174 615.5 487 66.7
Peaxi162Scf00788g00114 Petunia axillaris HOM05D005575 ORTHO05D007355 3.4e-174 615.5 489 67.7
AL3G37400 Arabidopsis lyrata HOM05D005575 ORTHO05D007355 4.5e-174 615.1 487 67.1
PSO210G5698 Papaver somniferum HOM05D005575 ORTHO05D007355 1.3e-173 613.6 487 65.7
arahy.Tifrunner.gnm1.ann1.XPT1GW Arachis hypogaea HOM05D005575 ORTHO05D007355 3.8e-173 612.1 489 68.5
EL10Ac8g19543 Beta vulgaris HOM05D005575 ORTHO05D007355 4.9e-173 611.7 516 64.7
SGA_v2.0_scaffold79G25614 Striga asiatica HOM05D005575 ORTHO05D007355 6.5e-173 611.3 492 66.3
PSO461G0077 Papaver somniferum HOM05D005575 ORTHO05D007355 1.4e-172 610.1 487 65.3
Lsat_1_v5_gn_3_124080 Lactuca sativa HOM05D005575 ORTHO05D007355 1.9e-172 609.8 482 66.6
Oeu064221.1 Olea europaea HOM05D005575 ORTHO05D007355 2.5e-172 609.4 504 63.1
PGSC0003DMG401006082 Solanum tuberosum HOM05D005575 ORTHO05D007355 5.5e-172 608.2 487 66.9
CSS0022244 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 2.1e-171 606.3 491 65.8
CSS0045755 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 6.0e-171 604.7 491 65.6
CSS0047423 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 6.0e-171 604.7 492 67.1
Solyc09g083000.3 Solanum lycopersicum HOM05D005575 ORTHO05D007355 7.9e-171 604.4 487 66.9
Sopen09g031870 Solanum pennellii HOM05D005575 ORTHO05D007355 1.3e-170 603.6 488 67.6
Hund21566 Selenicereus undatus HOM05D005575 ORTHO05D007355 1.5e-169 600.1 488 65.6
MSTRG.24710 Avicennia marina HOM05D005575 ORTHO05D007355 5.7e-169 598.2 490 65.5
Sopen03g001350 Solanum pennellii HOM05D005575 ORTHO05D007355 7.4e-169 597.8 492 67.5
Peaxi162Scf00467g00914 Petunia axillaris HOM05D005575 ORTHO05D007355 9.6e-169 597.4 490 65.1
Sc25g0004210 Simmondsia chinensis HOM05D005575 ORTHO05D007355 1.3e-168 597.0 489 66.1
Solyc03g005310.4 Solanum lycopersicum HOM05D005575 ORTHO05D007355 2.1e-168 596.3 492 67.5
Rhsim02G0032000 Rhododendron simsii HOM05D005575 ORTHO05D007355 1.8e-167 593.2 489 65.0
PGSC0003DMG400013391 Solanum tuberosum HOM05D005575 ORTHO05D007355 6.9e-167 591.3 492 67.1
Nitab4.5_0003815g0070 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.6e-166 589.3 488 67.6
Nitab4.5_0000977g0090 Nicotiana tabacum HOM05D005575 ORTHO05D007355 5.9e-166 588.2 489 67.1
DCAR_030703 Daucus carota HOM05D005575 ORTHO05D007355 1.9e-164 583.2 407 69.8
Migut.N00227 Erythranthe guttata HOM05D005575 ORTHO05D007355 2.1e-163 579.7 491 63.5
ATR0665G105 Amborella trichopoda HOM05D005575 ORTHO05D007355 1.3e-162 577.0 474 62.9
CAN.G749.16 Capsicum annuum HOM05D005575 ORTHO05D007355 3.9e-162 575.5 440 66.8
vmacro08393 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 5.1e-162 575.1 402 70.6
AUR62034661 Chenopodium quinoa HOM05D005575 ORTHO05D007355 1.3e-160 570.5 440 66.8
Migut.G00397 Erythranthe guttata HOM05D005575 ORTHO05D007355 2.8e-160 569.3 488 62.1
HPP92_006286 Vanilla planifolia HOM05D005575 ORTHO05D007355 5.1e-154 548.5 489 62.0
Os07g0609766 Oryza sativa ssp. japonica HOM05D005575 ORTHO05D007355 1.5e-153 547.0 478 61.5
SGA_v2.0_scaffold101G29757 Striga asiatica HOM05D005575 ORTHO05D007355 7.4e-153 544.7 490 62.2
Zm00001eb183490 Zea mays HOM05D005575 ORTHO05D007355 1.4e-151 540.4 483 59.8
SEGI_28733 Sequoiadendron giganteum HOM05D005575 ORTHO05D007355 3.1e-151 539.3 441 60.8
vmacro15397 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 5.3e-151 538.5 416 67.3
unitig_62.g23259 Utricularia gibba HOM05D005575 ORTHO05D007355 1.4e-148 530.4 479 60.1
AUR62008592 Chenopodium quinoa HOM05D005575 ORTHO05D007355 9.4e-148 527.7 398 69.1
Mapoly0008s0256 Marchantia polymorpha HOM05D005575 ORTHO05D007355 2.2e-136 490.0 409 60.1
Lj3A720G71 Lonicera japonica HOM05D005575 ORTHO05D007355 7.5e-129 464.9 320 72.8
AagrBONN_evm.TU.Sc2ySwM_117.635 Anthoceros agrestis HOM05D005575 ORTHO05D007355 3.1e-127 459.5 398 57.0
SMO230G0018 Selaginella moellendorffii HOM05D005575 ORTHO05D007355 3.1e-127 459.5 396 58.1
Pp3c9_410 Physcomitrium patens HOM05D005575 ORTHO05D007355 2.0e-105 387.1 483 46.8
SHI00566 Sapria himalayana HOM05D005575 ORTHO05D007355 2.1e-99 367.1 287 63.1
Pp3c15_1060 Physcomitrium patens HOM05D005575 ORTHO05D007355 4.0e-90 336.3 436 46.3
CBR_g10806 Chara braunii HOM05D005575 ORTHO05D007355 1.4e-87 327.8 558 35.1
Nn1g02522 Nelumbo nucifera HOM05D005575 ORTHO05D007355 1.5e-84 317.8 286 65.0
BcaC05g25996 Brassica carinata HOM05D005575 ORTHO05D007355 1.0e-69 268.5 295 56.3
Actinidia05473 Actinidia chinensis HOM05D005575 ORTHO05D007355 1.9e-68 264.2 188 68.1
BolC5t30651H Brassica oleracea HOM05D005575 ORTHO05D007355 1.4e-58 231.5 281 53.4
C05p19490 Brassica napus HOM05D005575 ORTHO05D007355 3.1e-58 230.3 281 53.0
TAR365G1190 Trochodendron aralioides HOM05D005575 ORTHO05D007355 4.1e-50 203.4 207 55.1
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 1.8e-42 177.9 145 60.7
C08p25570 Brassica napus HOM05D005575 ORTHO05D027690 2.1e-38 164.5 148 56.1
SHI00565 Sapria himalayana HOM05D005575 ORTHO05D007355 5.1e-37 159.8 196 53.1
AagrBONN_evm.TU.Sc2ySwM_344.3391 Anthoceros agrestis HOM05D005575 ORTHO05D007355 1.2e-33 148.7 372 30.1
BolC8t50179H Brassica oleracea HOM05D005575 ORTHO05D027690 4.5e-33 146.7 125 59.2
TAR365G1076 Trochodendron aralioides HOM05D005575 ORTHO05D007355 4.4e-28 130.2 147 55.8
BcaC07g39513 Brassica carinata HOM05D005575 ORTHO05D027690 1.4e-21 108.6 60 81.7
Psat7g122560 Pisum sativum HOM05D005575 ORTHO05D007355 2.0e-17 94.7 59 71.2
Sabra10G0062800 Salix brachista HOM05D005575 ORTHO05D027690 7.2e-15 86.3 69 65.2
SalBow3G4542 Salvia bowleyana HOM05D005575 ORTHO05D007355 1.5e-12 78.6 71 63.4
Cc06_g23150 Coffea canephora HOM05D005575 ORTHO05D007355 4.2e-07 60.5 65 55.4


User provided reference genes

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