Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G2261 Fragaria x ananassa HOM05D003836 ORTHO05D004556 0.0e+00 1142.9 594 100.0
FvH4_4g33240 Fragaria vesca HOM05D003836 ORTHO05D004556 0.0e+00 1123.2 600 98.2
FAN12G1258 Fragaria x ananassa HOM05D003836 ORTHO05D004556 0.0e+00 1117.4 594 98.3
FAN22G0514 Fragaria x ananassa HOM05D003836 ORTHO05D004556 0.0e+00 1076.6 594 95.1
FAN07G2679 Fragaria x ananassa HOM05D003836 ORTHO05D004556 6.0e-306 1053.5 596 93.6
RcHm_v2.0_Chr4g0442391 Rosa chinensis HOM05D003836 ORTHO05D004556 2.7e-282 974.9 600 87.8
MD16G1015700 Malus domestica HOM05D003836 ORTHO05D004556 9.1e-246 853.6 617 76.0
Prupe.1G335900 Prunus persica HOM05D003836 ORTHO05D004556 2.0e-232 809.3 616 72.1
GSVIVG01011621001 Vitis vinifera HOM05D003836 ORTHO05D004556 9.8e-216 753.8 638 65.8
Lalb_Chr11g0070001 Lupinus albus HOM05D003836 ORTHO05D004556 2.3e-212 742.7 639 63.4
CANSAT78G2203 Cannabis sativa HOM05D003836 ORTHO05D004556 6.6e-212 741.1 649 64.4
TPR.G35600 Trifolium pratense HOM05D003836 ORTHO05D004556 6.6e-212 741.1 649 62.7
Cfa015051 Carpinus fangiana HOM05D003836 ORTHO05D004556 5.6e-211 738.0 652 64.1
Glyma.04G189300 Glycine max HOM05D003836 ORTHO05D004556 5.6e-211 738.0 627 65.7
Medtr3g076570 Medicago truncatula HOM05D003836 ORTHO05D004556 7.3e-211 737.6 626 64.4
Manes.15G136900 Manihot esculenta HOM05D003836 ORTHO05D004556 2.1e-210 736.1 620 64.7
Manes.17G086000 Manihot esculenta HOM05D003836 ORTHO05D004556 4.0e-209 731.9 622 66.2
Ciclev10014689m.g Citrus clementina HOM05D003836 ORTHO05D004556 2.6e-208 729.2 604 65.9
Ca_16122_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 5.8e-208 728.0 642 61.8
Lj1g0024673 Lotus japonicus HOM05D003836 ORTHO05D004556 7.5e-208 727.6 617 65.2
VMungo1309G0617 Vigna mungo HOM05D003836 ORTHO05D004556 7.5e-208 727.6 494 74.5
TAR374G0617 Trochodendron aralioides HOM05D003836 ORTHO05D004556 1.3e-207 726.9 640 61.7
QL03p038287 Quercus lobata HOM05D003836 ORTHO05D004556 4.9e-207 724.9 683 60.3
Glyma.06G176300 Glycine max HOM05D003836 ORTHO05D004556 5.4e-206 721.5 624 63.0
Phvul.009G172600 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 2.1e-205 719.5 605 64.0
Gorai.008G170400 Gossypium raimondii HOM05D003836 ORTHO05D004556 5.1e-204 714.9 624 62.7
CiPaw.05G187900 Carya illinoinensis HOM05D003836 ORTHO05D004556 8.6e-204 714.1 509 72.3
Gorai.013G030000 Gossypium raimondii HOM05D003836 ORTHO05D004556 1.1e-203 713.8 620 63.9
Atru.chr7.2694 Acer truncatum HOM05D003836 ORTHO05D004556 9.5e-203 710.7 612 61.9
CsaV3_7G022080 Cucumis sativus L. HOM05D003836 ORTHO05D004556 1.2e-202 710.3 657 62.7
ClCG11G007570 Citrullus lanatus HOM05D003836 ORTHO05D004556 2.3e-201 706.1 651 60.5
arahy.Tifrunner.gnm1.ann1.THT645 Arachis hypogaea HOM05D003836 ORTHO05D004556 1.2e-200 703.7 525 69.9
TWI74G0623 Tripterygium wilfordii HOM05D003836 ORTHO05D004556 1.2e-200 703.7 627 62.7
Haze_10840 Corylus avellana HOM05D003836 ORTHO05D004556 1.5e-200 703.4 646 61.1
PGR142G3191 Punica granatum HOM05D003836 ORTHO05D004556 3.4e-200 702.2 616 64.0
arahy.Tifrunner.gnm1.ann1.FHB42U Arachis hypogaea HOM05D003836 ORTHO05D004556 2.2e-199 699.5 645 60.9
Potri.010G103400 Populus trichocarpa HOM05D003836 ORTHO05D004556 4.9e-199 698.4 611 64.2
Gohir.A13G027900 Gossypium hirsutum HOM05D003836 ORTHO05D004556 1.9e-198 696.4 549 67.2
Psat5g116920 Pisum sativum HOM05D003836 ORTHO05D004556 3.5e-197 692.2 595 62.5
TAR622G1236 Trochodendron aralioides HOM05D003836 ORTHO05D004556 3.5e-197 692.2 644 59.0
Dinv02294 Davidia involucrata HOM05D003836 ORTHO05D004556 6.6e-196 688.0 437 79.4
Migut.E00502 Erythranthe guttata HOM05D003836 ORTHO05D004556 6.6e-196 688.0 623 60.5
arahy.Tifrunner.gnm1.ann1.HCE13Z Arachis hypogaea HOM05D003836 ORTHO05D004556 1.5e-195 686.8 619 62.0
Sed0017171 Sechium edule HOM05D003836 ORTHO05D004556 8.1e-194 681.0 653 60.2
Nn4g24475 Nelumbo nucifera HOM05D003836 ORTHO05D004556 1.8e-193 679.9 644 60.1
MELO3C013236.2 Cucumis melo HOM05D003836 ORTHO05D004556 2.6e-192 676.0 629 62.3
Thecc.02G307000 Theobroma cacao HOM05D003836 ORTHO05D004556 2.6e-192 676.0 624 61.9
Nn3g18432 Nelumbo nucifera HOM05D003836 ORTHO05D004556 1.9e-190 669.8 641 59.1
Sabra10G0076000 Salix brachista HOM05D003836 ORTHO05D004556 9.3e-190 667.5 622 61.9
Gohir.D13G026700 Gossypium hirsutum HOM05D003836 ORTHO05D004556 2.1e-189 666.4 548 65.1
PSO063G7099 Papaver somniferum HOM05D003836 ORTHO05D004556 2.1e-189 666.4 610 60.8
Aqoxy6G01037 Aquilegia oxysepala HOM05D003836 ORTHO05D004556 1.7e-188 663.3 494 68.8
PSO782G5172 Papaver somniferum HOM05D003836 ORTHO05D004556 3.9e-188 662.1 610 60.5
Duzib251G0897 Durio zibethinus HOM05D003836 ORTHO05D004556 9.6e-187 657.5 618 61.8
COL.COLO4_27608 Corchorus olitorius HOM05D003836 ORTHO05D004556 1.6e-186 656.8 538 68.0
Dinv32673 Davidia involucrata HOM05D003836 ORTHO05D004556 2.8e-186 656.0 636 59.7
Eucgr.G02079 Eucalyptus grandis HOM05D003836 ORTHO05D004556 9.9e-184 647.5 643 58.5
Hma1.2p1_2859F.1_g329510 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 3.8e-183 645.6 403 77.7
Atru.chr11.806 Acer truncatum HOM05D003836 ORTHO05D004556 5.6e-179 631.7 397 78.3
Lsat_1_v5_gn_3_104360 Lactuca sativa HOM05D003836 ORTHO05D004556 1.6e-178 630.2 618 57.9
Duzib268G0198 Durio zibethinus HOM05D003836 ORTHO05D004556 2.1e-178 629.8 625 57.8
CARHR060610 Cardamine hirsuta HOM05D003836 ORTHO05D004556 2.8e-178 629.4 628 56.5
Cc11_g06410 Coffea canephora HOM05D003836 ORTHO05D004556 2.8e-178 629.4 509 65.2
AT1G67960 Arabidopsis thaliana HOM05D003836 ORTHO05D004556 9.0e-177 624.4 636 54.9
AL2G26960 Arabidopsis lyrata HOM05D003836 ORTHO05D004556 1.2e-176 624.0 624 56.4
Sp5g22940 Schrenkiella parvula HOM05D003836 ORTHO05D004556 2.6e-176 622.9 637 54.6
Carub.0002s1445 Capsella rubella HOM05D003836 ORTHO05D004556 8.4e-175 617.8 625 56.2
Gohir.A12G154400 Gossypium hirsutum HOM05D003836 ORTHO05D004556 7.1e-174 614.8 559 61.0
DCAR_023556 Daucus carota HOM05D003836 ORTHO05D004556 1.0e-172 610.9 605 54.7
Thhalv10018303m.g Eutrema salsugineum HOM05D003836 ORTHO05D004556 3.0e-172 609.4 619 54.8
Gohir.D12G157600 Gossypium hirsutum HOM05D003836 ORTHO05D004556 3.0e-172 609.4 560 60.9
Cpa.g.sc2.157 Carica papaya HOM05D003836 ORTHO05D004556 3.9e-172 609.0 571 60.6
ECA246G1487 Erigeron canadensis HOM05D003836 ORTHO05D004556 2.8e-170 602.8 510 63.3
Ah.02g131240 Amaranthus hybridus HOM05D003836 ORTHO05D004556 3.1e-169 599.4 415 73.0
SalBow2G2298 Salvia bowleyana HOM05D003836 ORTHO05D004556 5.3e-169 598.6 634 53.0
Aa31sc536G20 Aethionema arabicum HOM05D003836 ORTHO05D004556 2.2e-167 593.2 660 51.2
Glyma.07G191900 Glycine max HOM05D003836 ORTHO05D004556 4.9e-167 592.0 491 65.2
ATR0021G013 Amborella trichopoda HOM05D003836 ORTHO05D004556 8.4e-167 591.3 644 52.3
EL10Ac8g19453 Beta vulgaris HOM05D003836 ORTHO05D004556 1.1e-166 590.9 657 53.0
A07p34480 Brassica napus HOM05D003836 ORTHO05D004556 5.5e-166 588.6 595 56.3
Glyma.13G184600 Glycine max HOM05D003836 ORTHO05D004556 4.5e-160 568.9 485 63.7
BcaB03g15387 Brassica carinata HOM05D003836 ORTHO05D004556 7.6e-160 568.2 615 53.3
Zm00001eb216180 Zea mays HOM05D003836 ORTHO05D004556 3.8e-159 565.8 607 51.7
arahy.Tifrunner.gnm1.ann1.36Q8NS Arachis hypogaea HOM05D003836 ORTHO05D004556 1.4e-158 563.9 619 54.0
TPR.G32436 Trifolium pratense HOM05D003836 ORTHO05D004556 2.3e-156 556.6 475 61.7
SGA_v2.0_scaffold23G10153 Striga asiatica HOM05D003836 ORTHO05D004556 3.2e-150 536.2 599 55.3
VMungo0251G2034 Vigna mungo HOM05D003836 ORTHO05D004556 5.7e-147 525.4 513 58.5
BcaC08g46221 Brassica carinata HOM05D003836 ORTHO05D004556 2.2e-143 513.5 614 50.7
Psat7g111040 Pisum sativum HOM05D003836 ORTHO05D004556 6.5e-143 511.9 365 70.4
unitig_8.g4015 Utricularia gibba HOM05D003836 ORTHO05D004556 1.1e-142 511.1 608 51.0
BolC6t39223H Brassica oleracea HOM05D003836 ORTHO05D004556 6.1e-141 505.4 568 52.3
Lj6A734G74 Lonicera japonica HOM05D003836 ORTHO05D004556 2.3e-140 503.4 602 50.8
Medtr4g090465 Medicago truncatula HOM05D003836 ORTHO05D004556 3.1e-137 493.0 375 67.7
arahy.Tifrunner.gnm1.ann1.6NWB5V Arachis hypogaea HOM05D003836 ORTHO05D004556 5.0e-135 485.7 494 57.3
MD13G1017500 Malus domestica HOM05D003836 ORTHO05D004556 1.1e-134 484.6 420 65.5
Phvul.002G223900 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 3.0e-132 476.5 503 54.3
Os03g0715400 Oryza sativa ssp. japonica HOM05D003836 ORTHO05D004556 1.2e-131 474.6 398 63.3
Lalb_Chr23g0273371 Lupinus albus HOM05D003836 ORTHO05D004556 1.8e-129 467.2 459 58.6
Pp3c12_1050 Physcomitrium patens HOM05D003836 ORTHO05D004556 1.2e-128 464.5 465 51.8
Mapoly0019s0007 Marchantia polymorpha HOM05D003836 ORTHO05D004556 2.0e-120 437.2 496 47.6
BcaB03g15147 Brassica carinata HOM05D003836 ORTHO05D004556 9.5e-118 428.3 567 46.2
Nitab4.5_0001516g0010 Nicotiana tabacum HOM05D003836 ORTHO05D004556 6.1e-117 425.6 745 40.9
Solyc06g051440.4 Solanum lycopersicum HOM05D003836 ORTHO05D004556 1.0e-116 424.9 285 73.3
SHI04351 Sapria himalayana HOM05D003836 ORTHO05D004556 1.3e-114 417.9 349 61.9
C06p42030 Brassica napus HOM05D003836 ORTHO05D004556 1.1e-113 414.8 574 45.5
AUR62033051 Chenopodium quinoa HOM05D003836 ORTHO05D004556 3.6e-109 399.8 536 50.9
Oeu036124.4 Olea europaea HOM05D003836 ORTHO05D004556 1.7e-106 391.0 270 73.3
arahy.Tifrunner.gnm1.ann1.0AB4R7 Arachis hypogaea HOM05D003836 ORTHO05D004556 9.2e-105 385.2 541 48.2
AagrBONN_evm.TU.Sc2ySwM_228.1822 Anthoceros agrestis HOM05D003836 ORTHO05D004556 4.9e-90 336.3 339 51.3
MBI11_g36366_MAGBIO Magnolia biondii HOM05D003836 ORTHO05D004556 9.2e-89 332.0 401 51.4
Sc10g0004880 Simmondsia chinensis HOM05D003836 ORTHO05D004556 4.3e-86 323.2 191 81.2
SMO358G0292 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 1.6e-85 321.2 462 40.5
Peaxi162Scf00825g00424 Petunia axillaris HOM05D003836 ORTHO05D004556 3.6e-85 320.1 394 52.0
HanXRQChr15g0473551 Helianthus annuus HOM05D003836 ORTHO05D004556 3.4e-83 313.5 258 63.6
Sc10g0004870 Simmondsia chinensis HOM05D003836 ORTHO05D004556 7.1e-81 305.8 393 50.6
Sopen06g017410 Solanum pennellii HOM05D003836 ORTHO05D004556 7.1e-81 305.8 409 48.4
Nitab4.5_0001227g0030 Nicotiana tabacum HOM05D003836 ORTHO05D004556 1.4e-76 291.6 616 37.0
Lalb_Chr23g0273381 Lupinus albus HOM05D003836 ORTHO05D004556 2.4e-76 290.8 171 80.7
CSS0006660 Camellia sinensis var. sinensis HOM05D003836 ORTHO05D004556 1.7e-71 274.6 161 79.5
AUR62042201 Chenopodium quinoa HOM05D003836 ORTHO05D004556 2.5e-70 270.8 553 39.1
DCAR_030293 Daucus carota HOM05D003836 ORTHO05D004556 2.1e-69 267.7 340 45.0
Hma1.2p1_1450F.1_g284160 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 5.8e-67 259.6 323 51.7
HanXRQChr15g0473541 Helianthus annuus HOM05D003836 ORTHO05D004556 1.1e-65 255.4 161 73.3
BcaC08g46015 Brassica carinata HOM05D003836 ORTHO05D004556 3.2e-65 253.8 188 69.1
Peaxi162Scf00825g00423 Petunia axillaris HOM05D003836 ORTHO05D004556 2.1e-64 251.1 160 74.4
MD13G1017700 Malus domestica HOM05D003836 ORTHO05D004556 1.3e-61 241.9 124 95.2
C01p04020 Brassica napus HOM05D003836 ORTHO05D004556 1.2e-56 225.3 181 61.9
Gorai.013G150200 Gossypium raimondii HOM05D003836 ORTHO05D004556 9.0e-52 209.1 127 81.1
Hma1.2p1_0658F.1_g197210 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 4.9e-50 203.4 297 47.1
arahy.Tifrunner.gnm1.ann1.I9RBIQ Arachis hypogaea HOM05D003836 ORTHO05D004556 1.9e-46 191.4 183 59.6
Nn8g39028 Nelumbo nucifera HOM05D003836 ORTHO05D004556 1.0e-42 179.1 140 66.4
Gohir.D13G133800 Gossypium hirsutum HOM05D003836 ORTHO05D004556 1.1e-41 175.6 127 70.9
Ca_18504_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 7.2e-41 172.9 161 61.5
Nn6g35150 Nelumbo nucifera HOM05D003836 ORTHO05D004556 4.6e-40 170.2 113 75.2
PRCOL_00001721 Prasinoderma coloniale HOM05D003836 ORTHO05D004556 1.0e-39 169.1 428 29.0
MCO03G489 Micromonas commoda HOM05D003836 ORTHO05D004556 3.0e-39 167.5 382 31.2
Nn6g35439 Nelumbo nucifera HOM05D003836 ORTHO05D004556 5.7e-38 163.3 127 66.1
CAN.G2032.2 Capsicum annuum HOM05D003836 ORTHO05D004556 7.7e-35 152.9 149 57.0
C06p38100 Brassica napus HOM05D003836 ORTHO05D004556 2.9e-34 151.0 239 39.3
BolC6t38907H Brassica oleracea HOM05D003836 ORTHO05D004556 2.9e-34 151.0 239 39.3
HPP92_020596 Vanilla planifolia HOM05D003836 ORTHO05D004556 1.1e-33 149.1 284 37.3
arahy.Tifrunner.gnm1.ann1.MA62LX Arachis hypogaea HOM05D003836 ORTHO05D004556 3.9e-31 140.6 88 80.7
Cre02.g091000 Chlamydomonas reinhardtii HOM05D003836 ORTHO05D004556 1.1e-28 132.5 497 23.7
Hund15725 Selenicereus undatus HOM05D003836 ORTHO05D004556 1.0e-26 125.9 130 54.6
Cpa.g.sc2.159 Carica papaya HOM05D003836 ORTHO05D004556 3.2e-25 120.9 69 78.3
RcHm_v2.0_Chr2g0114371 Rosa chinensis HOM05D003836 ORTHO05D004556 3.2e-25 120.9 70 91.4
arahy.Tifrunner.gnm1.ann1.ANFG2H Arachis hypogaea HOM05D003836 ORTHO05D004556 3.6e-24 117.5 92 65.2
arahy.Tifrunner.gnm1.ann1.2AK3X2 Arachis hypogaea HOM05D003836 ORTHO05D004556 2.3e-23 114.8 86 66.3
arahy.Tifrunner.gnm1.ann1.62N7D7 Arachis hypogaea HOM05D003836 ORTHO05D004556 2.3e-23 114.8 86 66.3
arahy.Tifrunner.gnm1.ann1.6IM5NS Arachis hypogaea HOM05D003836 ORTHO05D004556 2.3e-23 114.8 86 66.3
arahy.Tifrunner.gnm1.ann1.QY8RSF Arachis hypogaea HOM05D003836 ORTHO05D004556 2.3e-23 114.8 86 66.3
arahy.Tifrunner.gnm1.ann1.1LH17Q Arachis hypogaea HOM05D003836 ORTHO05D004556 8.8e-23 112.8 78 71.8
arahy.Tifrunner.gnm1.ann1.XXVP91 Arachis hypogaea HOM05D003836 ORTHO05D004556 9.7e-22 109.4 78 69.2
TPR.G24606 Trifolium pratense HOM05D003836 ORTHO05D004556 1.3e-21 109.0 69 71.0
Cfa025144 Carpinus fangiana HOM05D003836 ORTHO05D004556 4.1e-20 104.0 298 31.9
Gohir.D06G130832 Gossypium hirsutum HOM05D005098 ORTHO05D004556 2.6e-19 101.3 83 69.9
Gorai.010G152700 Gossypium raimondii HOM05D003836 ORTHO05D004556 4.2e-17 94.0 54 81.5
Oeu043972.2 Olea europaea HOM05D003836 ORTHO05D004556 9.4e-17 92.8 160 40.6
SEGI_35804 Sequoiadendron giganteum HOM05D003836 ORTHO05D004556 6.1e-16 90.1 123 43.1
arahy.Tifrunner.gnm1.ann1.X5KGN6 Arachis hypogaea HOM05D003836 ORTHO05D004556 5.2e-15 87.0 122 46.7
SHI04354 Sapria himalayana HOM05D003836 ORTHO05D004556 5.7e-14 83.6 56 69.6
Ca_18505_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 3.7e-13 80.9 70 58.6
SMO278G0031 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 7.0e-12 76.6 94 47.9
Nn6g35438 Nelumbo nucifera HOM05D003836 ORTHO05D004556 1.2e-11 75.9 48 79.2
arahy.Tifrunner.gnm1.ann1.UYUS3H Arachis hypogaea HOM05D003836 ORTHO05D019773 2.7e-11 74.7 48 79.2
RcHm_v2.0_Chr4g0390701 Rosa chinensis HOM05D003836 ORTHO05D004556 1.0e-10 72.8 39 87.2
arahy.Tifrunner.gnm1.ann1.45U5GW Arachis hypogaea HOM05D003836 ORTHO05D011406 5.0e-10 70.5 47 74.5
RcHm_v2.0_Chr6g0287871 Rosa chinensis HOM05D003836 ORTHO05D004556 5.0e-10 70.5 40 85.0
Zm00001eb237940 Zea mays HOM05D003836 ORTHO05D004556 6.5e-10 70.1 46 63.0
Zm00001eb410650 Zea mays HOM05D003836 ORTHO05D004556 6.5e-10 70.1 46 63.0
SMO200G0209 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 1.5e-09 68.9 82 46.3
Zm00001eb175210 Zea mays HOM05D003836 ORTHO05D004556 1.9e-09 68.6 46 60.9
arahy.Tifrunner.gnm1.ann1.70DEUR Arachis hypogaea HOM05D000602 ORTHO05D004556 2.1e-08 65.1 36 75.0
arahy.Tifrunner.gnm1.ann1.JZ224H Arachis hypogaea HOM05D022818 ORTHO05D000304 3.0e-07 61.2 51 66.7
RcHm_v2.0_Chr5g0078431 Rosa chinensis HOM05D003836 ORTHO05D004556 9.8e-06 56.2 27 92.6


User provided reference genes

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