Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G1869 Fragaria x ananassa HOM05D006285 ORTHO05D007249 9.1e-93 343.6 176 100.0
FAN07G2449 Fragaria x ananassa HOM05D006285 ORTHO05D007249 2.8e-86 322.0 176 94.9
FAN12G2625 Fragaria x ananassa HOM05D006285 ORTHO05D007249 3.2e-82 308.5 178 91.0
FvH4_4g23000 Fragaria vesca HOM05D006285 ORTHO05D007249 4.2e-82 308.1 177 91.0
RcHm_v2.0_Chr4g0429271 Rosa chinensis HOM05D006285 ORTHO05D007249 2.6e-63 245.7 178 75.3
Cfa009427 Carpinus fangiana HOM05D006285 ORTHO05D007249 5.1e-19 98.6 199 39.2
CiPaw.05G103600 Carya illinoinensis HOM05D006285 ORTHO05D007249 6.6e-19 98.2 199 41.2
Haze_12478 Corylus avellana HOM05D006285 ORTHO05D007249 1.9e-18 96.7 199 39.2
PGR057G0008 Punica granatum HOM05D006285 ORTHO05D007249 3.3e-18 95.9 200 38.0
PGR119G0305 Punica granatum HOM05D006285 ORTHO05D007249 3.3e-18 95.9 200 38.0
Aa31LG3G14440 Aethionema arabicum HOM05D006285 ORTHO05D007249 5.6e-18 95.1 201 37.3
CiPaw.06G107800 Carya illinoinensis HOM05D006285 ORTHO05D007249 7.3e-18 94.7 197 39.6
MD13G1127100 Malus domestica HOM05D006285 ORTHO05D007249 9.6e-18 94.4 217 40.1
ClCG06G001800 Citrullus lanatus HOM05D006285 ORTHO05D007249 1.3e-17 94.0 194 39.7
GSVIVG01000967001 Vitis vinifera HOM05D006285 ORTHO05D007249 2.1e-17 93.2 202 35.1
Gohir.D01G019500 Gossypium hirsutum HOM05D006285 ORTHO05D007249 3.6e-17 92.4 207 36.2
Gorai.002G021800 Gossypium raimondii HOM05D006285 ORTHO05D007249 3.6e-17 92.4 207 36.2
QL03p050117 Quercus lobata HOM05D006285 ORTHO05D007249 6.2e-17 91.7 202 38.6
CANSAT01G0254 Cannabis sativa HOM05D006285 ORTHO05D007249 1.1e-16 90.9 210 36.7
MD16G1127400 Malus domestica HOM05D006285 ORTHO05D007249 1.1e-16 90.9 216 38.4
Thecc.02G195800 Theobroma cacao HOM05D006285 ORTHO05D007249 1.1e-16 90.9 209 35.4
Duzib052G0121 Durio zibethinus HOM05D006285 ORTHO05D007249 3.1e-16 89.4 208 34.6
Ciclev10032858m.g Citrus clementina HOM05D006285 ORTHO05D007249 4.0e-16 89.0 194 38.1
A10p24990 Brassica napus HOM05D006285 ORTHO05D007249 5.3e-16 88.6 205 35.6
BraA10t44561Z Brassica rapa HOM05D006285 ORTHO05D007249 5.3e-16 88.6 205 35.6
Prupe.1G218500 Prunus persica HOM05D006285 ORTHO05D007249 6.9e-16 88.2 230 37.8
BcaC04g19135 Brassica carinata HOM05D006285 ORTHO05D007249 1.2e-15 87.4 205 35.6
COL.COLO4_20246 Corchorus olitorius HOM05D006285 ORTHO05D007249 1.5e-15 87.0 209 34.4
MELO3C022348.2 Cucumis melo HOM05D006285 ORTHO05D007249 1.5e-15 87.0 197 37.6
Sp6g30770 Schrenkiella parvula HOM05D006285 ORTHO05D007249 2.0e-15 86.7 196 36.2
THA.LOC104803190 Tarenaya hassleriana HOM05D006285 ORTHO05D007249 3.4e-15 85.9 212 35.8
AL6G23830 Arabidopsis lyrata HOM05D006285 ORTHO05D007249 4.5e-15 85.5 207 33.8
Atru.chr11.2411 Acer truncatum HOM05D006285 ORTHO05D007249 5.8e-15 85.1 169 39.1
THA.LOC104825472 Tarenaya hassleriana HOM05D006285 ORTHO05D007249 5.8e-15 85.1 211 34.6
Gorai.005G196200 Gossypium raimondii HOM05D006285 ORTHO05D007249 7.6e-15 84.7 214 35.5
AT5G13220 Arabidopsis thaliana HOM05D006285 ORTHO05D007249 9.9e-15 84.3 211 35.5
BcaNung01167 Brassica carinata HOM05D006285 ORTHO05D007249 9.9e-15 84.3 203 34.5
CsaV3_6G007840 Cucumis sativus L. HOM05D006285 ORTHO05D007249 1.3e-14 84.0 195 35.4
Thhalv10014724m.g Eutrema salsugineum HOM05D006285 ORTHO05D007249 1.7e-14 83.6 206 35.0
BolC9t59226H Brassica oleracea HOM05D006285 ORTHO05D007249 2.2e-14 83.2 205 34.1
Duzib248G1203 Durio zibethinus HOM05D006285 ORTHO05D007249 2.2e-14 83.2 211 32.7
TWI18G1468 Tripterygium wilfordii HOM05D006285 ORTHO05D007249 2.2e-14 83.2 207 32.4
Aqoxy5G03206 Aquilegia oxysepala HOM05D006285 ORTHO05D007249 2.9e-14 82.8 133 41.4
C09p63860 Brassica napus HOM05D006285 ORTHO05D007249 2.9e-14 82.8 205 34.1
Gohir.D02G174500 Gossypium hirsutum HOM05D006285 ORTHO05D007249 2.9e-14 82.8 214 35.0
Gohir.A03G151500 Gossypium hirsutum HOM05D006285 ORTHO05D007249 3.8e-14 82.4 214 35.0
A02p01780 Brassica napus HOM05D006285 ORTHO05D007249 6.4e-14 81.6 204 33.3
A03p05870 Brassica napus HOM05D006285 ORTHO05D007249 8.4e-14 81.3 198 35.9
BolC2t06542H Brassica oleracea HOM05D006285 ORTHO05D007249 8.4e-14 81.3 203 33.5
BraA03t09926Z Brassica rapa HOM05D006285 ORTHO05D007249 8.4e-14 81.3 198 35.9
Sabra01G0044900 Salix brachista HOM05D006285 ORTHO05D007249 8.4e-14 81.3 211 37.4
MSTRG.467 Avicennia marina HOM05D006285 ORTHO05D007249 1.1e-13 80.9 204 35.8
C02p05990 Brassica napus HOM05D006285 ORTHO05D007249 1.1e-13 80.9 203 33.5
BraA02t05154Z Brassica rapa HOM05D006285 ORTHO05D007249 1.1e-13 80.9 204 33.3
Potri.003G165000 Populus trichocarpa HOM05D006285 ORTHO05D007249 1.4e-13 80.5 208 35.6
BcaNung01870 Brassica carinata HOM05D006285 ORTHO05D007249 1.9e-13 80.1 204 33.8
BcaNung01871 Brassica carinata HOM05D006285 ORTHO05D007249 1.9e-13 80.1 204 33.8
Potri.001G062500 Populus trichocarpa HOM05D006285 ORTHO05D007249 2.4e-13 79.7 211 36.0
C03p06880 Brassica napus HOM05D006285 ORTHO05D007249 3.2e-13 79.3 198 35.4
BolC3t13190H Brassica oleracea HOM05D006285 ORTHO05D007249 3.2e-13 79.3 198 35.4
Dinv19860 Davidia involucrata HOM05D006285 ORTHO05D007249 4.2e-13 79.0 215 33.5
Manes.09G186200 Manihot esculenta HOM05D006285 ORTHO05D007249 4.2e-13 79.0 207 34.8
PGR102G0288 Punica granatum HOM05D006285 ORTHO05D007249 4.2e-13 79.0 203 35.5
Carub.0006s1139 Capsella rubella HOM05D006285 ORTHO05D007249 7.1e-13 78.2 213 32.9
Oeu044502.1 Olea europaea HOM05D006285 ORTHO05D007249 2.1e-12 76.6 82 52.4
EL10Ac6g13588 Beta vulgaris HOM05D006285 ORTHO05D007249 1.0e-11 74.3 205 33.2
Sed0027998 Sechium edule HOM05D006285 ORTHO05D007249 1.0e-11 74.3 184 35.3
Sabra03G0120200 Salix brachista HOM05D006285 ORTHO05D007249 6.7e-11 71.6 230 33.0
Actinidia30601 Actinidia chinensis HOM05D006285 ORTHO05D007249 1.5e-10 70.5 162 34.0
Peaxi162Scf00128g00175 Petunia axillaris HOM05D006285 ORTHO05D007249 1.5e-10 70.5 202 33.7
PGSC0003DMG400006480 Solanum tuberosum HOM05D006285 ORTHO05D007249 1.5e-10 70.5 153 34.6
CSS0034430 Camellia sinensis var. sinensis HOM05D006285 ORTHO05D007249 3.3e-10 69.3 95 42.1
TAR622G0521 Trochodendron aralioides HOM05D006285 ORTHO05D007249 4.3e-10 68.9 185 34.6
Actinidia34008 Actinidia chinensis HOM05D006285 ORTHO05D007249 2.1e-09 66.6 94 42.6
MSTRG.8043 Avicennia marina HOM05D006285 ORTHO05D007249 2.1e-09 66.6 170 32.9
FAN02G1879 Fragaria x ananassa HOM05D001047 ORTHO05D000768 2.1e-09 66.6 125 37.6
CDE06G1494 Ceratophyllum demersum HOM05D006285 ORTHO05D007249 2.8e-09 66.2 152 34.2
Eucgr.B03545 Eucalyptus grandis HOM05D006285 ORTHO05D007249 4.8e-09 65.5 192 33.3
Rhsim12G0098900 Rhododendron simsii HOM05D006285 ORTHO05D007249 6.2e-09 65.1 210 31.9
Sc04g0010480 Simmondsia chinensis HOM05D006285 ORTHO05D007249 8.1e-09 64.7 162 34.6
CARHR200230 Cardamine hirsuta HOM05D006285 ORTHO05D007249 1.1e-08 64.3 146 34.9
Eucgr.G01954 Eucalyptus grandis HOM05D006285 ORTHO05D007249 1.1e-08 64.3 93 41.9
PSO017G1512 Papaver somniferum HOM05D006285 ORTHO05D007249 1.1e-08 64.3 226 30.5
Actinidia22128 Actinidia chinensis HOM05D006285 ORTHO05D007249 1.4e-08 63.9 193 30.6
ECA233G3183 Erigeron canadensis HOM05D006285 ORTHO05D007249 1.4e-08 63.9 143 32.2
FvH4_6g35140 Fragaria vesca HOM05D001047 ORTHO05D000768 1.4e-08 63.9 97 41.2
PSO478G0022 Papaver somniferum HOM05D006285 ORTHO05D007249 1.4e-08 63.9 223 28.3
BcaB01g05368 Brassica carinata HOM05D006285 ORTHO05D007249 2.4e-08 63.2 85 44.7
HanXRQChr08g0210081 Helianthus annuus HOM05D006285 ORTHO05D007249 2.4e-08 63.2 137 35.0
SEGI_20867 Sequoiadendron giganteum HOM05D006285 ORTHO05D007249 2.4e-08 63.2 174 31.6
Migut.K01038 Erythranthe guttata HOM05D006285 ORTHO05D007249 3.1e-08 62.8 157 33.8
MBI07_g36277_MAGBIO Magnolia biondii HOM05D006285 ORTHO05D007249 3.1e-08 62.8 172 34.3
PSO675G2785 Papaver somniferum HOM05D006285 ORTHO05D007249 9.0e-08 61.2 197 30.5
CAN.G1179.3 Capsicum annuum HOM05D006285 ORTHO05D000105 1.5e-07 60.5 81 45.7
Actinidia09609 Actinidia chinensis HOM05D006285 ORTHO05D007249 2.0e-07 60.1 186 29.6
ATR0582G164 Amborella trichopoda HOM05D006285 ORTHO05D007249 2.6e-07 59.7 205 29.8
Zm00001eb084980 Zea mays HOM05D006285 ORTHO05D007249 2.6e-07 59.7 98 38.8
ClCG07G011740 Citrullus lanatus HOM05D006285 ORTHO05D007249 3.4e-07 59.3 88 44.3
CsaV3_4G002460 Cucumis sativus L. HOM05D006285 ORTHO05D007249 3.4e-07 59.3 86 41.9
FAN09G2579 Fragaria x ananassa HOM05D001047 ORTHO05D000768 4.5e-07 58.9 125 35.2
TAR374G0139 Trochodendron aralioides HOM05D006285 ORTHO05D007249 5.8e-07 58.5 119 34.5
MELO3C017797.2 Cucumis melo HOM05D006285 ORTHO05D007249 9.9e-07 57.8 86 41.9
Lsat_1_v5_gn_3_31461 Lactuca sativa HOM05D006285 ORTHO05D007249 9.9e-07 57.8 132 33.3
ECA236G0223 Erigeron canadensis HOM05D001047 ORTHO05D000768 1.7e-06 57.0 138 35.5
FAN14G3719 Fragaria x ananassa HOM05D001047 ORTHO05D000768 1.7e-06 57.0 92 38.0
PSO732G0051 Papaver somniferum HOM05D006285 ORTHO05D007249 2.2e-06 56.6 188 29.8
Rhsim12G0019500 Rhododendron simsii HOM05D006285 ORTHO05D007249 2.2e-06 56.6 81 42.0
TWI36G1029 Tripterygium wilfordii HOM05D006285 ORTHO05D007249 2.9e-06 56.2 168 29.8
Gohir.A01G021000 Gossypium hirsutum HOM05D006285 ORTHO05D007249 3.8e-06 55.8 158 30.4
Cpa.g.sc207.10 Carica papaya HOM05D006285 ORTHO05D007249 4.9e-06 55.5 190 29.5
Aqoxy3G01789 Aquilegia oxysepala HOM05D006285 ORTHO05D007249 6.4e-06 55.1 108 34.3
HanXRQChr06g0175041 Helianthus annuus HOM05D006285 ORTHO05D007249 6.4e-06 55.1 78 41.0
SalBow6G5825 Salvia bowleyana HOM05D001047 ORTHO05D000768 6.4e-06 55.1 136 32.4
HanXRQChr17g0540471 Helianthus annuus HOM05D006285 ORTHO05D007249 8.4e-06 54.7 80 40.0


User provided reference genes

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