Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G1111 Fragaria x ananassa HOM05D006474 ORTHO05D007994 3.5e-252 874.4 417 100.0
FAN12G2823 Fragaria x ananassa HOM05D006474 ORTHO05D007994 7.1e-245 850.1 417 96.9
FAN07G0584 Fragaria x ananassa HOM05D006474 ORTHO05D007994 1.3e-243 845.9 421 96.2
FvH4_4g06930 Fragaria vesca HOM05D006474 ORTHO05D007994 4.0e-240 834.3 419 95.2
RcHm_v2.0_Chr4g0398871 Rosa chinensis HOM05D006474 ORTHO05D007994 2.3e-227 792.0 413 90.1
MD13G1241100 Malus domestica HOM05D006474 ORTHO05D007994 7.4e-194 680.6 410 76.1
Prupe.1G072500 Prunus persica HOM05D006474 ORTHO05D007994 1.6e-180 636.3 418 72.7
GSVIVG01029282001 Vitis vinifera HOM05D006474 ORTHO05D007994 1.6e-175 619.8 385 74.3
Potri.006G072800 Populus trichocarpa HOM05D006474 ORTHO05D007994 5.5e-173 611.3 366 76.2
Sabra06G0054200 Salix brachista HOM05D006474 ORTHO05D007994 4.7e-172 608.2 425 68.0
PGR142G0270 Punica granatum HOM05D006474 ORTHO05D007994 1.4e-171 606.7 427 67.9
CiPaw.07G199100 Carya illinoinensis HOM05D006474 ORTHO05D007994 1.5e-170 603.2 367 73.3
QL02p064597 Quercus lobata HOM05D006474 ORTHO05D007994 4.4e-170 601.7 368 75.0
Manes.06G017600 Manihot esculenta HOM05D006474 ORTHO05D007994 1.3e-169 600.1 365 74.8
arahy.Tifrunner.gnm1.ann1.HVXZ0P Arachis hypogaea HOM05D006474 ORTHO05D007994 1.1e-168 597.0 415 66.5
Eucgr.C00087 Eucalyptus grandis HOM05D006474 ORTHO05D007994 2.4e-168 595.9 394 68.8
Cpa.g.sc115.63 Carica papaya HOM05D006474 ORTHO05D007994 7.0e-168 594.3 374 71.9
Cc01_g11810 Coffea canephora HOM05D006474 ORTHO05D007994 9.1e-168 594.0 382 71.5
Thecc.04G204000 Theobroma cacao HOM05D006474 ORTHO05D007994 1.6e-167 593.2 381 72.4
TAR383G1087 Trochodendron aralioides HOM05D006474 ORTHO05D007994 2.0e-167 592.8 424 66.3
Aqoxy7G02891 Aquilegia oxysepala HOM05D006474 ORTHO05D007994 4.5e-167 591.7 365 74.0
Nitab4.5_0004916g0010 Nicotiana tabacum HOM05D006474 ORTHO05D007994 7.7e-167 590.9 367 73.3
MELO3C009992.2 Cucumis melo HOM05D006474 ORTHO05D007994 2.2e-166 589.3 388 69.8
Lalb_Chr07g0180731 Lupinus albus HOM05D006474 ORTHO05D007994 5.0e-166 588.2 389 69.7
Actinidia38505 Actinidia chinensis HOM05D006474 ORTHO05D007994 6.5e-166 587.8 422 67.1
Ca_21263_v3 Cicer arietinum L. HOM05D006474 ORTHO05D007994 6.5e-166 587.8 411 66.9
HanXRQChr06g0181391 Helianthus annuus HOM05D006474 ORTHO05D007994 6.5e-166 587.8 420 64.0
Glyma.17G057700 Glycine max HOM05D006474 ORTHO05D007994 8.5e-166 587.4 367 72.2
PGSC0003DMG400019888 Solanum tuberosum HOM05D006474 ORTHO05D007994 8.5e-166 587.4 367 72.2
Sopen07g004200 Solanum pennellii HOM05D006474 ORTHO05D007994 7.2e-165 584.3 367 71.9
Sc14g0003050 Simmondsia chinensis HOM05D006474 ORTHO05D007994 9.5e-165 583.9 405 67.4
CsaV3_1G043980 Cucumis sativus L. HOM05D006474 ORTHO05D007994 1.2e-164 583.6 387 69.5
ClCG03G011950 Citrullus lanatus HOM05D006474 ORTHO05D007994 1.6e-164 583.2 388 68.3
Haze_22046 Corylus avellana HOM05D006474 ORTHO05D007994 1.6e-164 583.2 439 63.8
Nitab4.5_0000028g0400 Nicotiana tabacum HOM05D006474 ORTHO05D007994 4.7e-164 581.6 368 72.6
DCAR_020143 Daucus carota HOM05D006474 ORTHO05D007994 6.1e-164 581.3 392 66.3
Gohir.A05G408600 Gossypium hirsutum HOM05D006474 ORTHO05D007994 1.0e-163 580.5 367 71.9
Medtr4g127130 Medicago truncatula HOM05D006474 ORTHO05D007994 1.8e-163 579.7 394 68.5
Solyc07g008310.3 Solanum lycopersicum HOM05D006474 ORTHO05D007994 3.0e-163 578.9 367 71.1
Gorai.012G008200 Gossypium raimondii HOM05D006474 ORTHO05D007994 5.2e-163 578.2 372 71.2
Lj4g0020492 Lotus japonicus HOM05D006474 ORTHO05D007994 8.8e-163 577.4 364 71.2
Peaxi162Scf00046g00533 Petunia axillaris HOM05D006474 ORTHO05D007994 8.8e-163 577.4 363 71.9
COL.COLO4_37571 Corchorus olitorius HOM05D006474 ORTHO05D007994 2.6e-162 575.9 364 72.5
TPR.G5392 Trifolium pratense HOM05D006474 ORTHO05D007994 1.7e-161 573.2 393 67.9
EL10Ac8g19287 Beta vulgaris HOM05D006474 ORTHO05D007994 2.8e-161 572.4 361 70.1
TWI32G0724 Tripterygium wilfordii HOM05D006474 ORTHO05D007994 6.3e-161 571.2 370 69.7
Ciclev10008481m.g Citrus clementina HOM05D006474 ORTHO05D007994 2.4e-160 569.3 388 69.1
arahy.Tifrunner.gnm1.ann1.Z6GGIF Arachis hypogaea HOM05D006474 ORTHO05D007994 4.5e-159 565.1 420 64.3
Duzib170G0180 Durio zibethinus HOM05D006474 ORTHO05D007994 4.5e-159 565.1 394 67.5
ECA236G3875 Erigeron canadensis HOM05D006474 ORTHO05D007994 4.5e-159 565.1 366 68.0
Nn8g40661 Nelumbo nucifera HOM05D006474 ORTHO05D007994 4.5e-159 565.1 357 73.1
vmacro20800 Vaccinium macrocarpon HOM05D006474 ORTHO05D007994 7.7e-159 564.3 427 63.2
ATR0580G130 Amborella trichopoda HOM05D006474 ORTHO05D007994 1.7e-158 563.1 365 70.4
Zm00001eb273050 Zea mays HOM05D006474 ORTHO05D007994 2.3e-158 562.8 364 68.4
MBI14_g10727_MAGBIO Magnolia biondii HOM05D006474 ORTHO05D007994 3.8e-158 562.0 427 63.2
MSTRG.5932 Avicennia marina HOM05D006474 ORTHO05D007994 6.6e-158 561.2 419 61.3
PSO063G0500 Papaver somniferum HOM05D006474 ORTHO05D007994 1.1e-157 560.5 368 69.8
Aa31LG2G20660 Aethionema arabicum HOM05D006474 ORTHO05D007994 1.5e-157 560.1 389 68.4
AUR62027431 Chenopodium quinoa HOM05D006474 ORTHO05D007994 7.3e-157 557.8 361 67.0
HPP92_010297 Vanilla planifolia HOM05D006474 ORTHO05D007994 3.6e-156 555.4 366 68.3
Oeu035450.1 Olea europaea HOM05D006474 ORTHO05D007994 4.0e-155 552.0 367 68.1
CARHR237790 Cardamine hirsuta HOM05D006474 ORTHO05D007994 2.0e-154 549.7 367 69.8
Migut.J00779 Erythranthe guttata HOM05D006474 ORTHO05D007994 2.0e-154 549.7 366 66.7
Thhalv10025251m.g Eutrema salsugineum HOM05D006474 ORTHO05D007994 2.0e-154 549.7 368 69.8
Os06g0698785 Oryza sativa ssp. japonica HOM05D006474 ORTHO05D007994 4.4e-154 548.5 400 63.5
AT4G29890 Arabidopsis thaliana HOM05D006474 ORTHO05D007994 1.3e-153 547.0 367 68.7
A03p59310 Brassica napus HOM05D006474 ORTHO05D007994 3.7e-153 545.4 393 64.6
BraA03t14988Z Brassica rapa HOM05D006474 ORTHO05D007994 3.7e-153 545.4 393 64.6
Sp7g27700 Schrenkiella parvula HOM05D006474 ORTHO05D007994 1.1e-152 543.9 367 68.4
AL7G22360 Arabidopsis lyrata HOM05D006474 ORTHO05D007994 1.8e-152 543.1 366 68.3
CDE02G2399 Ceratophyllum demersum HOM05D006474 ORTHO05D007994 4.1e-152 542.0 385 64.7
Carub.0007s1076 Capsella rubella HOM05D006474 ORTHO05D007994 1.6e-151 540.0 389 65.0
Dinv41197 Davidia involucrata HOM05D006474 ORTHO05D007994 4.6e-151 538.5 422 61.8
Sopen07g004190 Solanum pennellii HOM05D006474 ORTHO05D007994 7.8e-151 537.7 362 67.7
SalBow1G1087 Salvia bowleyana HOM05D006474 ORTHO05D007994 2.3e-150 536.2 366 66.1
SGA_v2.0_scaffold112G31632 Striga asiatica HOM05D006474 ORTHO05D007994 3.0e-150 535.8 414 61.6
Sed0005056 Sechium edule HOM05D006474 ORTHO05D007994 8.6e-150 534.3 396 64.1
Solyc07g008300.3 Solanum lycopersicum HOM05D006474 ORTHO05D007994 8.6e-150 534.3 365 66.8
C07p57320 Brassica napus HOM05D006474 ORTHO05D007994 1.9e-149 533.1 371 67.4
Sed0007392 Sechium edule HOM05D006474 ORTHO05D007994 7.3e-149 531.2 367 63.5
BolC7t46201H Brassica oleracea HOM05D006474 ORTHO05D007994 9.5e-149 530.8 393 64.4
Rhsim01G0114400 Rhododendron simsii HOM05D006474 ORTHO05D007994 2.8e-148 529.3 324 75.0
HanXRQChr06g0181381 Helianthus annuus HOM05D006474 ORTHO05D007994 8.0e-148 527.7 388 63.1
Atru.BG.24.p Acer truncatum HOM05D006474 ORTHO05D007994 1.0e-147 527.3 347 71.8
BcaNung00499 Brassica carinata HOM05D006474 ORTHO05D007994 1.4e-147 526.9 374 67.1
Gohir.D04G006800 Gossypium hirsutum HOM05D006474 ORTHO05D007994 2.3e-147 526.2 368 67.1
CANSAT54G2413 Cannabis sativa HOM05D006474 ORTHO05D007994 7.8e-143 511.1 363 65.6
Psat4g014320 Pisum sativum HOM05D006474 ORTHO05D007994 3.0e-142 509.2 367 65.1
Lsat_1_v5_gn_8_68301 Lactuca sativa HOM05D006474 ORTHO05D007994 2.8e-140 502.7 424 59.4
Migut.J00780 Erythranthe guttata HOM05D006474 ORTHO05D007994 1.5e-138 496.9 365 60.5
Ah.14g085320 Amaranthus hybridus HOM05D006474 ORTHO05D007994 4.9e-137 491.9 321 69.2
AUR62031264 Chenopodium quinoa HOM05D006474 ORTHO05D007994 4.7e-132 475.3 302 68.5
AagrBONN_evm.TU.Sc2ySwM_117.1622 Anthoceros agrestis HOM05D006474 ORTHO05D007994 2.3e-131 473.0 368 59.2
Phvul.003G140100 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 8.9e-131 471.1 293 70.6
CAN.G403.4 Capsicum annuum HOM05D006474 ORTHO05D007994 4.4e-130 468.8 320 67.5
SMO196G0177 Selaginella moellendorffii HOM05D006474 ORTHO05D007994 1.7e-129 466.8 389 56.3
FAN22G2051 Fragaria x ananassa HOM05D006474 ORTHO05D007994 1.5e-125 453.8 378 66.1
AUR62032506 Chenopodium quinoa HOM05D006474 ORTHO05D007994 1.5e-122 443.7 406 50.2
Pp3c13_13580 Physcomitrium patens HOM05D006474 ORTHO05D007994 7.6e-122 441.4 358 55.9
AUR62043230 Chenopodium quinoa HOM05D006474 ORTHO05D007994 4.2e-120 435.6 404 49.0
Mapoly0089s0013 Marchantia polymorpha HOM05D006474 ORTHO05D007994 7.8e-119 431.4 377 53.6
PSO170G4238 Papaver somniferum HOM05D006474 ORTHO05D007994 2.6e-114 416.4 276 68.5
EL10Ac6g13937 Beta vulgaris HOM05D006474 ORTHO05D007994 3.0e-110 402.9 362 50.6
Cfa013469 Carpinus fangiana HOM05D006474 ORTHO05D007994 9.0e-107 391.3 277 68.2
Lju50A4G45 Lonicera japonica HOM05D006474 ORTHO05D007994 1.8e-102 377.1 260 68.1
CSS0012665 Camellia sinensis var. sinensis HOM05D006474 ORTHO05D007994 5.8e-98 362.1 225 72.9
MCO02G024 Micromonas commoda HOM05D006474 ORTHO05D007994 8.2e-92 341.7 365 47.1
Hund22985 Selenicereus undatus HOM05D006474 ORTHO05D007994 1.1e-80 304.7 401 45.1
Lsat_1_v5_gn_9_69680 Lactuca sativa HOM05D006474 ORTHO05D007994 2.3e-70 270.4 237 56.5
Phvul.010G082000 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 1.4e-62 244.6 186 61.3
PRCOL_00004194 Prasinoderma coloniale HOM05D006474 ORTHO05D007994 1.1e-56 224.9 483 31.1
Lsat_1_v5_gn_5_32380 Lactuca sativa HOM05D006474 ORTHO05D007994 2.2e-52 210.7 194 52.1
Ah.03g136670 Amaranthus hybridus HOM05D006474 ORTHO05D007994 1.1e-48 198.4 231 41.1
RcHm_v2.0_Chr4g0398881 Rosa chinensis HOM05D006474 ORTHO05D007994 2.4e-43 180.6 316 38.0
SEGI_01125 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 7.8e-42 175.6 129 60.5
Phvul.011G131100 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 1.4e-30 138.3 102 60.8
Actinidia29962 Actinidia chinensis HOM05D006474 ORTHO05D007994 2.6e-21 107.5 90 58.9
Gohir.A08G164600 Gossypium hirsutum HOM05D000075 ORTHO05D000264 1.6e-18 98.2 86 53.5
Thecc.09G192500 Theobroma cacao HOM05D006474 ORTHO05D007994 7.8e-18 95.9 61 72.1
Gohir.A01G088200 Gossypium hirsutum HOM05D006474 ORTHO05D007994 1.0e-17 95.5 60 71.7
SEGI_13868 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 1.9e-16 91.3 61 70.5
Lsat_1_v5_gn_3_77541 Lactuca sativa HOM05D006474 ORTHO05D007994 3.4e-13 80.5 51 68.6
Oeu005633.1 Olea europaea HOM05D006474 ORTHO05D007994 9.9e-13 79.0 62 56.5
Gohir.A05G306101 Gossypium hirsutum HOM05D005508 ORTHO05D007994 5.4e-11 73.2 43 72.1
SEGI_25707 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 1.1e-08 65.5 42 61.9
Gohir.A06G077600 Gossypium hirsutum HOM05D000075 ORTHO05D000264 9.6e-08 62.4 71 47.9


User provided reference genes

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