Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G0829 Fragaria x ananassa HOM05D001216 ORTHO05D011815 8.5e-93 343.6 164 100.0
FAN18G4148 Fragaria x ananassa HOM05D001216 ORTHO05D011815 5.3e-71 271.2 159 83.6
FAN05G0592 Fragaria x ananassa HOM05D001216 ORTHO05D011815 2.2e-61 239.2 154 77.9
FAN22G0603 Fragaria x ananassa HOM05D001216 ORTHO05D011815 6.5e-61 237.7 154 77.3
FAN21G0567 Fragaria x ananassa HOM05D001216 ORTHO05D011815 1.1e-60 236.9 154 77.3
FAN22G2164 Fragaria x ananassa HOM05D001216 ORTHO05D011815 1.1e-60 236.9 154 77.3
FAN04G1577 Fragaria x ananassa HOM05D001216 ORTHO05D011815 2.5e-60 235.7 154 76.6
FAN26G0893 Fragaria x ananassa HOM05D001216 ORTHO05D011815 2.5e-60 235.7 154 76.6
FAN17G2871 Fragaria x ananassa HOM05D007529 ORTHO05D011815 2.6e-57 225.7 150 76.7
FAN21G1093 Fragaria x ananassa HOM05D001216 ORTHO05D011815 3.4e-57 225.3 169 69.2
FAN10G1306 Fragaria x ananassa HOM05D001216 ORTHO05D011815 5.7e-57 224.6 154 74.7
FAN04G0702 Fragaria x ananassa HOM05D001216 ORTHO05D011815 1.4e-55 219.9 168 68.5
FAN05G0311 Fragaria x ananassa HOM05D001216 ORTHO05D011815 4.1e-55 218.4 180 66.1
FAN27G2928 Fragaria x ananassa HOM05D001216 ORTHO05D011815 5.4e-55 218.0 154 74.0
FvH4_3g31250 Fragaria vesca HOM05D001216 ORTHO05D011815 4.5e-54 214.9 151 72.8
FAN10G2709 Fragaria x ananassa HOM05D001216 ORTHO05D011815 5.0e-53 211.5 154 72.7
FAN17G1526 Fragaria x ananassa HOM05D001216 ORTHO05D011815 9.8e-49 197.2 154 65.6
FAN01G1976 Fragaria x ananassa HOM05D001216 ORTHO05D011815 3.1e-47 192.2 136 72.8
FAN03G2628 Fragaria x ananassa HOM05D001216 ORTHO05D011815 6.6e-45 184.5 155 65.8
FAN21G3946 Fragaria x ananassa HOM05D001216 ORTHO05D011815 6.1e-43 177.9 140 69.3
FAN15G3600 Fragaria x ananassa HOM05D001216 ORTHO05D011815 9.5e-36 154.1 112 67.9
FAN26G0156 Fragaria x ananassa HOM05D001216 ORTHO05D011815 2.1e-35 152.9 110 69.1
FAN01G2876 Fragaria x ananassa HOM05D000985 ORTHO05D011815 8.0e-35 151.0 112 67.0
FAN03G1594 Fragaria x ananassa HOM05D000985 ORTHO05D011815 1.2e-17 94.0 96 54.2
FAN15G2671 Fragaria x ananassa HOM05D000985 ORTHO05D011815 2.0e-17 93.2 45 100.0
FAN26G2243 Fragaria x ananassa HOM05D000985 ORTHO05D000866 2.0e-17 93.2 45 100.0
FAN27G1041 Fragaria x ananassa HOM05D001216 ORTHO05D005688 5.8e-17 91.7 138 42.8
RcHm_v2.0_Chr6g0294391 Rosa chinensis HOM05D001216 ORTHO05D005688 7.6e-17 91.3 138 42.8
MD11G1306700 Malus domestica HOM05D001216 ORTHO05D005688 9.9e-17 90.9 44 97.7
Prupe.8G264600 Prunus persica HOM05D001216 ORTHO05D005688 9.9e-17 90.9 44 97.7
FvH4_2g26030 Fragaria vesca HOM05D001216 ORTHO05D005688 1.3e-16 90.5 138 42.0
FAN15G2312 Fragaria x ananassa HOM05D001216 ORTHO05D005688 1.3e-16 90.5 138 42.0
FAN24G0487 Fragaria x ananassa HOM05D001216 ORTHO05D005688 1.3e-16 90.5 138 42.0
Cc01_g21070 Coffea canephora HOM05D001216 ORTHO05D005688 1.7e-16 90.1 128 43.8
Ca_09190_v3 Cicer arietinum L. HOM05D001216 ORTHO05D005688 2.2e-16 89.7 44 95.5
Glyma.03G216400 Glycine max HOM05D001216 ORTHO05D005688 2.2e-16 89.7 44 95.5
Glyma.19G212900 Glycine max HOM05D001216 ORTHO05D005688 2.2e-16 89.7 44 95.5
Lalb_Chr15g0078431 Lupinus albus HOM05D001216 ORTHO05D005688 2.2e-16 89.7 44 95.5
Lalb_Chr18g0046881 Lupinus albus HOM05D001216 ORTHO05D005688 2.2e-16 89.7 44 95.5
Nn4g25744 Nelumbo nucifera HOM05D001216 ORTHO05D005688 2.2e-16 89.7 44 95.5
Phvul.001G209900 Phaseolus vulgaris HOM05D001216 ORTHO05D005688 2.2e-16 89.7 44 95.5
VMungo1383G0601 Vigna mungo HOM05D001216 ORTHO05D005688 2.2e-16 89.7 44 95.5
Cpa.g.sc151.24 Carica papaya HOM05D001216 ORTHO05D005688 4.9e-16 88.6 44 93.2
Hma1.2p1_0494F.1_g165430 Hydrangea macrophylla HOM05D001216 ORTHO05D005688 6.4e-16 88.2 44 93.2
MD03G1291500 Malus domestica HOM05D001216 ORTHO05D005688 6.4e-16 88.2 44 95.5
Nn3g21560 Nelumbo nucifera HOM05D001216 ORTHO05D005688 6.4e-16 88.2 44 93.2
Solyc09g098580.3 Solanum lycopersicum HOM05D001216 ORTHO05D005688 6.4e-16 88.2 150 39.3
CSS0031124 Camellia sinensis var. sinensis HOM05D001216 ORTHO05D005688 8.4e-16 87.8 128 43.0
Dinv19670 Davidia involucrata HOM05D001216 ORTHO05D005688 8.4e-16 87.8 44 93.2
Manes.01G222100 Manihot esculenta HOM05D001216 ORTHO05D005688 8.4e-16 87.8 44 93.2
Medtr7g108940 Medicago truncatula HOM05D001216 ORTHO05D005688 8.4e-16 87.8 44 93.2
TPR.G9647 Trifolium pratense HOM05D001216 ORTHO05D005688 8.4e-16 87.8 44 93.2
Solyc09g075390.4 Solanum lycopersicum HOM05D001216 ORTHO05D005688 1.4e-15 87.0 150 39.3
Sopen09g030160 Solanum pennellii HOM05D001216 ORTHO05D005688 1.4e-15 87.0 150 39.3
Sopen09g036490 Solanum pennellii HOM05D001216 ORTHO05D005688 1.4e-15 87.0 150 38.7
CiPaw.07G111800 Carya illinoinensis HOM05D001216 ORTHO05D005688 1.9e-15 86.7 44 93.2
Ciclev10018801m.g Citrus clementina HOM05D001216 ORTHO05D005688 1.9e-15 86.7 44 93.2
ECA248G1090 Erigeron canadensis HOM05D001216 ORTHO05D005688 1.9e-15 86.7 44 90.9
HanXRQChr01g0000981 Helianthus annuus HOM05D001216 ORTHO05D005688 1.9e-15 86.7 44 90.9
MBI19_g30015_MAGBIO Magnolia biondii HOM05D001216 ORTHO05D005688 2.4e-15 86.3 44 90.9
ATR0693G436 Amborella trichopoda HOM05D001216 ORTHO05D005688 3.2e-15 85.9 44 90.9
Cfa005876 Carpinus fangiana HOM05D001216 ORTHO05D005688 3.2e-15 85.9 44 90.9
Haze_04975 Corylus avellana HOM05D001216 ORTHO05D005688 3.2e-15 85.9 44 90.9
Dinv33073 Davidia involucrata HOM05D001216 ORTHO05D005688 3.2e-15 85.9 44 90.9
TWI14G0472 Tripterygium wilfordii HOM05D001216 ORTHO05D005688 3.2e-15 85.9 44 90.9
Atru.chr5.1093 Acer truncatum HOM05D001216 ORTHO05D005688 4.2e-15 85.5 44 90.9
Eucgr.H01087 Eucalyptus grandis HOM05D001216 ORTHO05D005688 4.2e-15 85.5 44 90.9
Potri.014G126700 Populus trichocarpa HOM05D001216 ORTHO05D005688 4.2e-15 85.5 44 90.9
QL12p027872 Quercus lobata HOM05D001216 ORTHO05D005688 4.2e-15 85.5 44 93.2
arahy.Tifrunner.gnm1.ann1.2L0PS7 Arachis hypogaea HOM05D001216 ORTHO05D005688 5.4e-15 85.1 44 88.6
MSTRG.17397 Avicennia marina HOM05D001216 ORTHO05D005688 5.4e-15 85.1 44 88.6
DCAR_018318 Daucus carota HOM05D001216 ORTHO05D005688 5.4e-15 85.1 44 88.6
Lj1g0005208 Lotus japonicus HOM05D001216 ORTHO05D005688 5.4e-15 85.1 44 88.6
MBI01_g10023_MAGBIO Magnolia biondii HOM05D000758 ORTHO05D014849 5.4e-15 85.1 47 85.1
Aa31LG5G1920 Aethionema arabicum HOM05D001216 ORTHO05D005688 7.1e-15 84.7 44 86.4
AL6G50870 Arabidopsis lyrata HOM05D001216 ORTHO05D005688 7.1e-15 84.7 44 86.4
AT4G02260 Arabidopsis thaliana HOM05D001216 ORTHO05D005688 7.1e-15 84.7 44 86.4
BcaB05g23611 Brassica carinata HOM05D001216 ORTHO05D005688 7.1e-15 84.7 44 86.4
Carub.0006s3491 Capsella rubella HOM05D001216 ORTHO05D005688 7.1e-15 84.7 44 86.4
Duzib211G0167 Durio zibethinus HOM05D001216 ORTHO05D005688 7.1e-15 84.7 44 90.9
Thhalv10028413m.g Eutrema salsugineum HOM05D001216 ORTHO05D005688 7.1e-15 84.7 44 86.4
Gohir.A12G128700 Gossypium hirsutum HOM05D001216 ORTHO05D005688 7.1e-15 84.7 44 90.9
Oeu011466.1 Olea europaea HOM05D001216 ORTHO05D005688 7.1e-15 84.7 44 86.4
Psat3g020360 Pisum sativum HOM05D001216 ORTHO05D005688 7.1e-15 84.7 44 90.9
PGR119G1482 Punica granatum HOM05D001216 ORTHO05D005688 7.1e-15 84.7 44 88.6
Sp6g02150 Schrenkiella parvula HOM05D001216 ORTHO05D005688 7.1e-15 84.7 44 86.4
Thecc.01G304700 Theobroma cacao HOM05D001216 ORTHO05D005688 7.1e-15 84.7 44 90.9
COL.COLO4_23312 Corchorus olitorius HOM05D001216 ORTHO05D005688 9.2e-15 84.3 44 90.9
Sed0014889 Sechium edule HOM05D001216 ORTHO05D005688 9.2e-15 84.3 44 86.4
Peaxi162Scf00001g03514 Petunia axillaris HOM05D001216 ORTHO05D005688 1.2e-14 84.0 44 90.9
Sabra14G0094400 Salix brachista HOM05D001216 ORTHO05D005688 1.2e-14 84.0 44 88.6
SalBow2G0728 Salvia bowleyana HOM05D001216 ORTHO05D005688 1.2e-14 84.0 128 42.2
SalBow7G2795 Salvia bowleyana HOM05D001216 ORTHO05D005688 1.2e-14 84.0 128 42.2
Ah.15g092990 Amaranthus hybridus HOM05D001216 ORTHO05D005688 1.6e-14 83.6 44 86.4
BcaC03g16112 Brassica carinata HOM05D001216 ORTHO05D005688 1.6e-14 83.6 44 84.1
A02p24590 Brassica napus HOM05D001216 ORTHO05D005688 1.6e-14 83.6 44 84.1
C02p38830 Brassica napus HOM05D001216 ORTHO05D005688 1.6e-14 83.6 44 84.1
CAN.G862.66 Capsicum annuum HOM05D001216 ORTHO05D005688 1.6e-14 83.6 44 90.9
AUR62008703 Chenopodium quinoa HOM05D001216 ORTHO05D005688 1.6e-14 83.6 44 84.1
AUR62025529 Chenopodium quinoa HOM05D001216 ORTHO05D005688 1.6e-14 83.6 44 84.1
ClCG10G011110 Citrullus lanatus HOM05D001216 ORTHO05D005688 1.6e-14 83.6 44 86.4
MELO3C017941.2 Cucumis melo HOM05D001216 ORTHO05D005688 1.6e-14 83.6 44 86.4
CsaV3_4G000980 Cucumis sativus L. HOM05D001216 ORTHO05D005688 1.6e-14 83.6 44 86.4
Lsat_1_v5_gn_9_5980 Lactuca sativa HOM05D001216 ORTHO05D005688 1.6e-14 83.6 128 41.4
PSO832G4554 Papaver somniferum HOM05D001216 ORTHO05D005688 1.6e-14 83.6 44 88.6
Sc05g0003610 Simmondsia chinensis HOM05D001216 ORTHO05D005688 1.6e-14 83.6 44 86.4
PGSC0003DMG400031817 Solanum tuberosum HOM05D001216 ORTHO05D005688 1.6e-14 83.6 44 90.9
GSVIVG01028045001 Vitis vinifera HOM05D001216 ORTHO05D005688 1.6e-14 83.6 44 86.4
CDE09G0061 Ceratophyllum demersum HOM05D001216 ORTHO05D005688 2.1e-14 83.2 44 86.4
Gohir.D08G051800 Gossypium hirsutum HOM05D001216 ORTHO05D005688 2.1e-14 83.2 44 86.4
Gorai.004G051900 Gossypium raimondii HOM05D001216 ORTHO05D005688 2.1e-14 83.2 44 86.4
Nitab4.5_0000116g0350 Nicotiana tabacum HOM05D001216 ORTHO05D005688 2.1e-14 83.2 44 88.6
Actinidia25817 Actinidia chinensis HOM05D001216 ORTHO05D005688 2.7e-14 82.8 44 86.4
BcaC04g24051 Brassica carinata HOM05D001216 ORTHO05D005688 2.7e-14 82.8 44 86.4
C09p01790 Brassica napus HOM05D001216 ORTHO05D005688 2.7e-14 82.8 44 86.4
BolC9t53114H Brassica oleracea HOM05D001216 ORTHO05D005688 2.7e-14 82.8 44 86.4
ECA247G3137 Erigeron canadensis HOM05D001216 ORTHO05D005688 2.7e-14 82.8 44 84.1
TAR362G1019 Trochodendron aralioides HOM05D001216 ORTHO05D005688 2.7e-14 82.8 44 88.6
Zm00001eb016330 Zea mays HOM05D001216 ORTHO05D005688 2.7e-14 82.8 44 88.6
BcaB01g02061 Brassica carinata HOM05D001216 ORTHO05D005688 3.5e-14 82.4 44 84.1
A09p01720 Brassica napus HOM05D001216 ORTHO05D005688 3.5e-14 82.4 44 84.1
BraA09t35827Z Brassica rapa HOM05D001216 ORTHO05D005688 3.5e-14 82.4 44 84.1
Lj1C22T13 Lonicera japonica HOM05D001216 ORTHO05D005688 3.5e-14 82.4 44 86.4
PSO210G0295 Papaver somniferum HOM05D001216 ORTHO05D005688 3.5e-14 82.4 44 88.6
Aqoxy5G00793 Aquilegia oxysepala HOM05D001216 ORTHO05D005688 6.0e-14 81.6 44 86.4
THA.LOC104801287 Tarenaya hassleriana HOM05D001216 ORTHO05D005688 6.0e-14 81.6 44 88.6
EL10Ac7g17565 Beta vulgaris HOM05D001216 ORTHO05D005688 1.0e-13 80.9 44 81.8
Gohir.A08G041800 Gossypium hirsutum HOM05D001216 ORTHO05D005688 1.0e-13 80.9 44 84.1
Migut.D00133 Erythranthe guttata HOM05D001216 ORTHO05D005688 1.3e-13 80.5 44 88.6
BraA02t07450Z Brassica rapa HOM05D001216 ORTHO05D005688 1.7e-13 80.1 44 81.8
HanXRQChr15g0465121 Helianthus annuus HOM05D001216 ORTHO05D005688 1.7e-13 80.1 44 84.1
Os03g0340900 Oryza sativa ssp. japonica HOM05D001216 ORTHO05D005688 1.7e-13 80.1 44 84.1
Actinidia21029 Actinidia chinensis HOM05D001216 ORTHO05D005688 2.3e-13 79.7 44 84.1
HPP92_001318 Vanilla planifolia HOM05D001216 ORTHO05D005688 2.3e-13 79.7 44 86.4
Rhsim01G0287300 Rhododendron simsii HOM05D001216 ORTHO05D005688 3.9e-13 79.0 131 41.2
Gohir.D12G132300 Gossypium hirsutum HOM05D001216 ORTHO05D005688 5.1e-13 78.6 44 88.6
Gorai.008G143400 Gossypium raimondii HOM05D001216 ORTHO05D005688 5.1e-13 78.6 44 88.6
Duzib138G0177 Durio zibethinus HOM05D001216 ORTHO05D005688 6.6e-13 78.2 44 81.8
CSS0041875 Camellia sinensis var. sinensis HOM05D001216 ORTHO05D005688 2.5e-12 76.3 44 84.1
SMO119G0141 Selaginella moellendorffii HOM05D001216 ORTHO05D005688 7.3e-12 74.7 44 75.0
vmacro15139 Vaccinium macrocarpon HOM05D001216 ORTHO05D005688 7.3e-12 74.7 44 84.1
Mapoly0053s0023 Marchantia polymorpha HOM05D001216 ORTHO05D005688 1.2e-11 73.9 44 77.3
Nitab4.5_0005673g0020 Nicotiana tabacum HOM05D001216 ORTHO05D005688 1.2e-11 73.9 50 74.0
Pp3c16_7020 Physcomitrium patens HOM05D001216 ORTHO05D005688 3.6e-11 72.4 45 71.1
Pp3c6_15190 Physcomitrium patens HOM05D001216 ORTHO05D005688 3.6e-11 72.4 44 75.0
AagrBONN_evm.TU.Sc2ySwM_117.2305 Anthoceros agrestis HOM05D001216 ORTHO05D005688 1.8e-10 70.1 44 70.5
AagrBONN_evm.TU.Sc2ySwM_117.2331 Anthoceros agrestis HOM05D001216 ORTHO05D005688 1.8e-10 70.1 44 70.5
FAN13G1906 Fragaria x ananassa HOM05D001129 ORTHO05D003814 5.2e-10 68.6 36 80.6
MCO04G258 Micromonas commoda HOM05D001216 ORTHO05D005688 1.3e-08 63.9 45 66.7
CBR_g12157 Chara braunii HOM05D001216 ORTHO05D011815 1.7e-08 63.5 43 67.4
PRCOL_00006040 Prasinoderma coloniale HOM05D001216 ORTHO05D005688 1.4e-07 60.5 43 65.1


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