Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN17G0511 Fragaria x ananassa HOM05D000862 ORTHO05D000943 8.2e-185 650.2 318 100.0
FAN22G1735 Fragaria x ananassa HOM05D000862 ORTHO05D000943 4.2e-40 169.5 148 63.5
RcHm_v2.0_Chr4g0416301 Rosa chinensis HOM05D000862 ORTHO05D000943 9.4e-40 168.3 320 39.1
FAN06G4041 Fragaria x ananassa HOM05D004048 ORTHO05D004859 5.4e-35 152.5 286 38.8
FAN06G3691 Fragaria x ananassa HOM05D000862 ORTHO05D000943 5.0e-33 146.0 284 37.3
FvH4_7g15371 Fragaria vesca HOM05D004048 ORTHO05D004859 2.6e-29 133.7 268 37.3
FAN09G0568 Fragaria x ananassa HOM05D019967 ORTHO05D202034 5.8e-21 105.9 58 87.9
FAN21G0061 Fragaria x ananassa HOM05D000862 ORTHO05D000943 1.6e-18 97.8 277 29.2
FAN25G3304 Fragaria x ananassa HOM05D000862 ORTHO05D000943 2.7e-18 97.1 277 29.2
FvH4_3g32560 Fragaria vesca HOM05D000862 ORTHO05D000943 3.5e-18 96.7 276 28.6
FvH4_4g19540 Fragaria vesca HOM05D000862 ORTHO05D000943 8.6e-17 92.0 179 35.2
FAN19G1366 Fragaria x ananassa HOM05D000862 ORTHO05D000943 1.1e-16 91.7 271 29.9
FAN06G0440 Fragaria x ananassa HOM05D003900 ORTHO05D005009 1.2e-15 88.2 135 41.5
FAN07G2189 Fragaria x ananassa HOM05D000862 ORTHO05D000943 3.4e-13 80.1 226 31.9
FAN11G0546 Fragaria x ananassa HOM05D000092 ORTHO05D000042 3.4e-13 80.1 222 31.5
RcHm_v2.0_Chr2g0172631 Rosa chinensis HOM05D000862 ORTHO05D000943 7.5e-13 79.0 315 27.9
FAN27G0829 Fragaria x ananassa HOM05D000005 ORTHO05D000294 6.4e-12 75.9 175 33.7
FAN16G0860 Fragaria x ananassa HOM05D000005 ORTHO05D000943 2.1e-10 70.9 179 30.7
Aa31LG7G4300 Aethionema arabicum HOM05D000862 ORTHO05D000943 2.7e-10 70.5 224 27.7
RcHm_v2.0_Chr6g0301821 Rosa chinensis HOM05D000862 ORTHO05D000943 3.5e-10 70.1 178 33.1
MD15G1021200 Malus domestica HOM05D000862 ORTHO05D000943 7.8e-10 68.9 187 32.6
FAN21G0458 Fragaria x ananassa HOM05D000005 ORTHO05D000294 1.3e-09 68.2 187 34.2
FAN11G0430 Fragaria x ananassa HOM05D000862 ORTHO05D000943 1.7e-09 67.8 173 29.5
FvH4_2g39220 Fragaria vesca HOM05D000862 ORTHO05D000943 2.3e-09 67.4 180 31.1
TWI56G0138 Tripterygium wilfordii HOM05D000862 ORTHO05D000943 3.0e-09 67.0 181 30.9
Potri.005G232400 Populus trichocarpa HOM05D000862 ORTHO05D000943 3.9e-09 66.6 210 27.6
Aqoxy5G01522 Aquilegia oxysepala HOM05D000862 ORTHO05D000943 6.6e-09 65.9 180 32.2
Dinv03894 Davidia involucrata HOM05D000862 ORTHO05D000943 8.6e-09 65.5 202 24.8
Ciclev10003362m.g Citrus clementina HOM05D000862 ORTHO05D000943 1.1e-08 65.1 199 30.2
Sed0026682 Sechium edule HOM05D000862 ORTHO05D000943 1.1e-08 65.1 194 29.9
AL1G32440 Arabidopsis lyrata HOM05D000862 ORTHO05D000943 1.5e-08 64.7 216 27.3
CsaV3_2G029090 Cucumis sativus L. HOM05D000862 ORTHO05D000943 1.5e-08 64.7 199 30.7
FvH4_3g35880 Fragaria vesca HOM05D000862 ORTHO05D000943 1.5e-08 64.7 162 32.1
Haze_22550 Corylus avellana HOM05D000862 ORTHO05D000943 1.9e-08 64.3 205 28.8
MELO3C010973.2 Cucumis melo HOM05D000862 ORTHO05D000943 1.9e-08 64.3 199 30.7
Rhsim06G0028200 Rhododendron simsii HOM05D000862 ORTHO05D000943 1.9e-08 64.3 178 32.6
TWI12G0321 Tripterygium wilfordii HOM05D000862 ORTHO05D000943 1.9e-08 64.3 180 32.2
FAN15G3373 Fragaria x ananassa HOM05D000862 ORTHO05D000943 3.3e-08 63.5 180 30.6
PGR083G2017 Punica granatum HOM05D000862 ORTHO05D000943 3.3e-08 63.5 197 28.9
Sp1g17550 Schrenkiella parvula HOM05D000862 ORTHO05D000943 3.3e-08 63.5 216 27.3
Sed0007237 Sechium edule HOM05D000862 ORTHO05D000003 3.3e-08 63.5 194 29.4
Hund26884 Selenicereus undatus HOM05D000862 ORTHO05D000943 3.3e-08 63.5 198 28.8
EL10Ac1g00598 Beta vulgaris HOM05D000862 ORTHO05D000943 4.3e-08 63.2 209 28.7
MD08G1023700 Malus domestica HOM05D000862 ORTHO05D000943 4.3e-08 63.2 187 28.9
Nn5g29733 Nelumbo nucifera HOM05D000862 ORTHO05D000943 4.3e-08 63.2 184 27.2
AT1G19715 Arabidopsis thaliana HOM05D000862 ORTHO05D000943 7.3e-08 62.4 216 27.3
FAN16G0956 Fragaria x ananassa HOM05D000092 ORTHO05D000042 7.3e-08 62.4 190 31.1
vmacro21687 Vaccinium macrocarpon HOM05D000862 ORTHO05D000943 9.5e-08 62.0 180 30.0
vmacro23427 Vaccinium macrocarpon HOM05D000862 ORTHO05D000943 9.5e-08 62.0 180 30.0
Atru.chr13.392 Acer truncatum HOM05D000862 ORTHO05D000943 1.2e-07 61.6 200 28.5
CSS0029292 Camellia sinensis var. sinensis HOM05D000862 ORTHO05D000943 1.2e-07 61.6 182 30.2
Actinidia22511 Actinidia chinensis HOM05D000862 ORTHO05D000943 1.6e-07 61.2 187 30.5
FAN21G2025 Fragaria x ananassa HOM05D000862 ORTHO05D000943 1.6e-07 61.2 203 28.1
QL02p010229 Quercus lobata HOM05D000862 ORTHO05D000943 1.6e-07 61.2 209 24.9
arahy.Tifrunner.gnm1.ann1.R4H24K Arachis hypogaea HOM05D000862 ORTHO05D000003 2.1e-07 60.8 208 28.4
A08p29700 Brassica napus HOM05D000862 ORTHO05D000943 2.1e-07 60.8 216 26.9
C08p19700 Brassica napus HOM05D000862 ORTHO05D000943 2.1e-07 60.8 216 26.9
BolC8t49606H Brassica oleracea HOM05D000862 ORTHO05D000943 2.1e-07 60.8 216 26.9
Ciclev10000604m.g Citrus clementina HOM05D000862 ORTHO05D000943 2.1e-07 60.8 198 29.8
Hma1.2p1_1254F.1_g270590 Hydrangea macrophylla HOM05D000862 ORTHO05D000943 2.1e-07 60.8 178 30.3
arahy.Tifrunner.gnm1.ann1.0CQZ6Z Arachis hypogaea HOM05D000862 ORTHO05D000003 2.8e-07 60.5 208 28.4
EL10Ac1g00597 Beta vulgaris HOM05D000862 ORTHO05D000943 2.8e-07 60.5 185 30.8
GSVIVG01009788001 Vitis vinifera HOM05D000862 ORTHO05D000943 2.8e-07 60.5 178 30.3
Carub.0001s1926 Capsella rubella HOM05D000862 ORTHO05D000943 3.6e-07 60.1 199 28.1
Potri.005G232500 Populus trichocarpa HOM05D000862 ORTHO05D000943 3.6e-07 60.1 176 33.0
FvH4_3g35700 Fragaria vesca HOM05D000005 ORTHO05D000294 4.7e-07 59.7 79 39.2
BraA08t34905Z Brassica rapa HOM05D000862 ORTHO05D000943 6.2e-07 59.3 216 26.4
Manes.18G021800 Manihot esculenta HOM05D000862 ORTHO05D000943 6.2e-07 59.3 185 29.7
Ah.12g065430 Amaranthus hybridus HOM05D000862 ORTHO05D000943 8.1e-07 58.9 197 30.5
Hma1.2p1_2581F.1_g324740 Hydrangea macrophylla HOM05D000862 ORTHO05D000943 8.1e-07 58.9 172 30.2
Lj3A201T34 Lonicera japonica HOM05D000041 ORTHO05D000452 8.1e-07 58.9 181 29.8
Thhalv10007145m.g Eutrema salsugineum HOM05D000862 ORTHO05D000943 1.1e-06 58.5 216 27.3
BcaB07g31985 Brassica carinata HOM05D000862 ORTHO05D000943 1.4e-06 58.2 282 25.5
Dinv00891 Davidia involucrata HOM05D000862 ORTHO05D000943 1.4e-06 58.2 196 24.5
Hma1.2p1_2241F.1_g317825 Hydrangea macrophylla HOM05D000862 ORTHO05D000943 1.4e-06 58.2 178 29.8
Hma1.2p1_2241F.1_g317830 Hydrangea macrophylla HOM05D000862 ORTHO05D000943 1.4e-06 58.2 178 29.8
Nitab4.5_0006269g0010 Nicotiana tabacum HOM05D000862 ORTHO05D000943 1.4e-06 58.2 220 24.5
TAR633G0214 Trochodendron aralioides HOM05D000862 ORTHO05D000943 1.4e-06 58.2 190 31.1
arahy.Tifrunner.gnm1.ann1.8VYI8C Arachis hypogaea HOM05D000862 ORTHO05D000943 1.8e-06 57.8 184 30.4
arahy.Tifrunner.gnm1.ann1.VI7NX3 Arachis hypogaea HOM05D000862 ORTHO05D000943 1.8e-06 57.8 184 30.4
CiPaw.07G156100 Carya illinoinensis HOM05D000862 ORTHO05D000943 2.3e-06 57.4 169 33.7
THA.LOC104809315 Tarenaya hassleriana HOM05D000862 ORTHO05D000943 2.3e-06 57.4 213 26.3
Nitab4.5_0000029g0100 Nicotiana tabacum HOM05D000862 ORTHO05D000943 3.1e-06 57.0 227 25.6
Sabra02G0024100 Salix brachista HOM05D000862 ORTHO05D000943 3.1e-06 57.0 187 31.0
MELO3C003820.2 Cucumis melo HOM05D000862 ORTHO05D000943 4.0e-06 56.6 194 29.4
FAN12G0175 Fragaria x ananassa HOM05D000862 ORTHO05D000943 4.0e-06 56.6 330 23.0
Lj3A199G60 Lonicera japonica HOM05D000041 ORTHO05D000943 4.0e-06 56.6 183 31.1
CAN.G960.44 Capsicum annuum HOM05D000862 ORTHO05D000943 5.2e-06 56.2 204 27.0
DCAR_009958 Daucus carota HOM05D000862 ORTHO05D000943 6.8e-06 55.8 203 24.6
Medtr3g464370 Medicago truncatula HOM05D000862 ORTHO05D000943 6.8e-06 55.8 181 28.7
C05p18160 Brassica napus HOM05D000862 ORTHO05D000003 8.9e-06 55.5 280 25.7
BolC5t30523H Brassica oleracea HOM05D000862 ORTHO05D000003 8.9e-06 55.5 280 25.7
FAN16G2975 Fragaria x ananassa HOM05D000005 ORTHO05D000943 8.9e-06 55.5 56 48.2
LjContig00155g0010021 Lotus japonicus HOM05D000862 ORTHO05D000943 8.9e-06 55.5 228 27.6


User provided reference genes

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