Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G3446 Fragaria x ananassa HOM05D000122 ORTHO05D017937 1.2e-138 496.5 242 100.0
FvH4_3g12110 Fragaria vesca HOM05D000122 ORTHO05D000139 1.2e-47 194.1 257 45.9
FAN21G0843 Fragaria x ananassa HOM05D000122 ORTHO05D025490 6.7e-46 188.3 293 41.3
FAN16G0266 Fragaria x ananassa HOM05D000122 ORTHO05D025490 1.4e-40 170.6 93 90.3
RcHm_v2.0_Chr5g0019791 Rosa chinensis HOM05D000122 ORTHO05D016976 3.5e-26 122.9 108 61.1
RcHm_v2.0_Chr2g0156591 Rosa chinensis HOM05D000122 ORTHO05D017937 1.2e-23 114.4 268 31.7
FAN02G3552 Fragaria x ananassa HOM05D000122 ORTHO05D016976 1.2e-21 107.8 293 31.1
FAN05G2731 Fragaria x ananassa HOM05D000122 ORTHO05D016976 1.1e-19 101.3 278 30.6
FAN02G3055 Fragaria x ananassa HOM05D000122 ORTHO05D017937 5.4e-19 99.0 269 30.1
FAN14G5011 Fragaria x ananassa HOM05D000122 ORTHO05D017937 6.8e-14 82.0 78 52.6
FAN09G3049 Fragaria x ananassa HOM05D000122 ORTHO05D017937 8.8e-14 81.6 288 27.1
FAN14G4976 Fragaria x ananassa HOM05D000122 ORTHO05D045793 4.4e-13 79.3 95 48.4
RcHm_v2.0_Chr1g0381211 Rosa chinensis HOM05D000122 ORTHO05D014632 1.8e-11 73.9 192 32.3
Prupe.4G109500 Prunus persica HOM05D000122 ORTHO05D025490 4.1e-11 72.8 269 26.8
FvH4_3g12120 Fragaria vesca HOM05D000122 ORTHO05D045733 5.4e-11 72.4 116 37.1
FAN25G1972 Fragaria x ananassa HOM05D000122 ORTHO05D045733 5.4e-11 72.4 116 37.1
FAN10G2623 Fragaria x ananassa HOM05D003847 ORTHO05D004976 1.6e-10 70.9 107 38.3
FAN01G2116 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.0e-10 70.5 107 38.3
FvH4_7g15084 Fragaria vesca HOM05D003847 ORTHO05D004976 5.9e-10 68.9 107 37.4
FAN06G4494 Fragaria x ananassa HOM05D003847 ORTHO05D004976 5.9e-10 68.9 107 37.4
FvH4_4g19150 Fragaria vesca HOM05D000122 ORTHO05D022612 7.7e-10 68.6 274 26.3
Prupe.6G143100 Prunus persica HOM05D000122 ORTHO05D000139 1.0e-09 68.2 300 28.3
FAN06G0785 Fragaria x ananassa HOM05D003847 ORTHO05D004976 2.3e-09 67.0 107 36.4
FAN12G0841 Fragaria x ananassa HOM05D000122 ORTHO05D022612 2.3e-09 67.0 268 26.1
FAN12G2062 Fragaria x ananassa HOM05D000122 ORTHO05D022612 2.3e-09 67.0 268 26.1
Prupe.4G109600 Prunus persica HOM05D000122 ORTHO05D025490 3.8e-09 66.2 109 38.5
RcHm_v2.0_Chr1g0324571 Rosa chinensis HOM05D000122 ORTHO05D000139 3.8e-09 66.2 278 26.6
RcHm_v2.0_Chr5g0017271 Rosa chinensis HOM05D000122 ORTHO05D019178 5.0e-09 65.9 311 26.4
FAN11G3488 Fragaria x ananassa HOM05D000122 ORTHO05D019178 6.6e-09 65.5 308 25.3
RcHm_v2.0_Chr4g0424091 Rosa chinensis HOM05D000122 ORTHO05D022612 6.6e-09 65.5 269 27.1
vmacro06554 Vaccinium macrocarpon HOM05D000122 ORTHO05D000139 8.6e-09 65.1 218 26.6
MD07G1291700 Malus domestica HOM05D000122 ORTHO05D000139 1.1e-08 64.7 111 36.9
RcHm_v2.0_Chr1g0381121 Rosa chinensis HOM05D000122 ORTHO05D000139 1.5e-08 64.3 295 27.1
Prupe.4G263700 Prunus persica HOM05D000122 ORTHO05D016976 2.5e-08 63.5 97 40.2
QL09p010456 Quercus lobata HOM05D000122 ORTHO05D000139 3.3e-08 63.2 107 34.6
RcHm_v2.0_Chr1g0340941 Rosa chinensis HOM05D000122 ORTHO05D017937 3.3e-08 63.2 271 24.4
MD01G1222000 Malus domestica HOM05D000122 ORTHO05D000139 4.3e-08 62.8 329 21.6
Prupe.1G162800 Prunus persica HOM05D000122 ORTHO05D000139 4.3e-08 62.8 119 35.3
MD07G1140800 Malus domestica HOM05D000122 ORTHO05D000139 1.2e-07 61.2 102 35.3
RcHm_v2.0_Chr5g0052111 Rosa chinensis HOM05D000122 ORTHO05D015650 1.6e-07 60.8 124 29.0
FAN21G3289 Fragaria x ananassa HOM05D000122 ORTHO05D019178 2.1e-07 60.5 307 24.4
FAN10G2238 Fragaria x ananassa HOM05D000122 ORTHO05D000139 2.8e-07 60.1 231 27.7
FAN10G4165 Fragaria x ananassa HOM05D000122 ORTHO05D014632 2.8e-07 60.1 231 27.7
MD07G1292800 Malus domestica HOM05D000122 ORTHO05D000139 2.8e-07 60.1 111 32.4
Gohir.A05G413600 Gossypium hirsutum HOM05D000122 ORTHO05D000139 3.6e-07 59.7 173 27.2
RcHm_v2.0_Chr2g0120231 Rosa chinensis HOM05D000122 ORTHO05D000139 3.6e-07 59.7 134 32.1
Prupe.2G222500 Prunus persica HOM05D000122 ORTHO05D020613 4.7e-07 59.3 100 34.0
FvH4_7g31950 Fragaria vesca HOM05D000122 ORTHO05D014632 6.1e-07 58.9 105 37.1
FAN12G2212 Fragaria x ananassa HOM05D000122 ORTHO05D014632 6.1e-07 58.9 91 39.6
FAN21G1475 Fragaria x ananassa HOM05D000122 ORTHO05D020726 6.1e-07 58.9 328 22.6
MD07G1291200 Malus domestica HOM05D000122 ORTHO05D000139 6.1e-07 58.9 101 36.6
FvH4_3g05120 Fragaria vesca HOM05D000122 ORTHO05D020726 8.0e-07 58.5 332 22.6
FAN03G1307 Fragaria x ananassa HOM05D000122 ORTHO05D011214 8.0e-07 58.5 102 35.3
FAN06G4255 Fragaria x ananassa HOM05D004486 ORTHO05D006329 8.0e-07 58.5 102 35.3
MD01G1222100 Malus domestica HOM05D000122 ORTHO05D000139 8.0e-07 58.5 129 33.3
RcHm_v2.0_Chr2g0110361 Rosa chinensis HOM05D000122 ORTHO05D000139 8.0e-07 58.5 121 34.7
FAN01G0198 Fragaria x ananassa HOM05D000122 ORTHO05D020669 1.0e-06 58.2 263 26.6
MD07G1292900 Malus domestica HOM05D000122 ORTHO05D000139 1.0e-06 58.2 111 32.4
MD08G1241600 Malus domestica HOM05D000122 ORTHO05D000139 1.0e-06 58.2 120 30.8
RcHm_v2.0_Chr1g0336901 Rosa chinensis HOM05D000122 ORTHO05D000139 1.0e-06 58.2 106 38.7
FvH4_7g31840 Fragaria vesca HOM05D000122 ORTHO05D014632 1.4e-06 57.8 268 25.7
FAN11G2906 Fragaria x ananassa HOM05D000122 ORTHO05D020726 1.4e-06 57.8 332 22.0
MD01G1054600 Malus domestica HOM05D000122 ORTHO05D000139 1.4e-06 57.8 113 32.7
MD01G1221600 Malus domestica HOM05D000122 ORTHO05D000139 1.4e-06 57.8 258 22.1
RcHm_v2.0_Chr5g0020221 Rosa chinensis HOM05D000122 ORTHO05D000139 1.4e-06 57.8 105 33.3
FvH4_7g31850 Fragaria vesca HOM05D000122 ORTHO05D014632 1.8e-06 57.4 300 25.0
RcHm_v2.0_Chr1g0381061 Rosa chinensis HOM05D000122 ORTHO05D000139 1.8e-06 57.4 104 36.5
FAN03G0929 Fragaria x ananassa HOM05D000122 ORTHO05D000139 2.3e-06 57.0 122 29.5
FAN03G2560 Fragaria x ananassa HOM05D000122 ORTHO05D014632 2.3e-06 57.0 89 39.3
MD04G1004700 Malus domestica HOM05D000122 ORTHO05D000139 2.3e-06 57.0 100 37.0
Prupe.6G254400 Prunus persica HOM05D000122 ORTHO05D014627 2.3e-06 57.0 114 34.2
RcHm_v2.0_Chr1g0381141 Rosa chinensis HOM05D000122 ORTHO05D014632 2.3e-06 57.0 266 25.6
RcHm_v2.0_Chr5g0052181 Rosa chinensis HOM05D000122 ORTHO05D015650 2.3e-06 57.0 131 27.5
FAN01G2332 Fragaria x ananassa HOM05D000122 ORTHO05D010668 3.0e-06 56.6 159 30.2
FAN03G1437 Fragaria x ananassa HOM05D000122 ORTHO05D010668 3.0e-06 56.6 159 30.2
FAN06G3477 Fragaria x ananassa HOM05D000122 ORTHO05D000139 3.0e-06 56.6 107 35.5
Prupe.2G223500 Prunus persica HOM05D000122 ORTHO05D011214 3.0e-06 56.6 105 30.5
FvH4_7g20740 Fragaria vesca HOM05D000122 ORTHO05D017956 4.0e-06 56.2 100 31.0
RcHm_v2.0_Chr1g0381091 Rosa chinensis HOM05D000122 ORTHO05D000139 4.0e-06 56.2 90 40.0
FAN10G1376 Fragaria x ananassa HOM05D000122 ORTHO05D000139 5.2e-06 55.8 84 39.3
Prupe.4G109900 Prunus persica HOM05D000122 ORTHO05D000139 5.2e-06 55.8 108 37.0
RcHm_v2.0_Chr1g0381351 Rosa chinensis HOM05D000122 ORTHO05D012353 5.2e-06 55.8 115 31.3
CANSAT21G1692 Cannabis sativa HOM05D000122 ORTHO05D000139 6.8e-06 55.5 95 32.6
FAN01G2802 Fragaria x ananassa HOM05D000122 ORTHO05D000139 6.8e-06 55.5 89 37.1
FAN26G0425 Fragaria x ananassa HOM05D000122 ORTHO05D000139 6.8e-06 55.5 98 32.7
Prupe.2G223000 Prunus persica HOM05D000122 ORTHO05D020613 6.8e-06 55.5 107 32.7
Prupe.2G312600 Prunus persica HOM05D000122 ORTHO05D000139 6.8e-06 55.5 119 34.5
FvH4_1g22250 Fragaria vesca HOM05D000122 ORTHO05D000139 8.9e-06 55.1 98 32.7
FAN06G4440 Fragaria x ananassa HOM05D000122 ORTHO05D000139 8.9e-06 55.1 104 35.6
FAN09G0628 Fragaria x ananassa HOM05D000122 ORTHO05D017937 8.9e-06 55.1 162 31.5
Prupe.2G223800 Prunus persica HOM05D000122 ORTHO05D011214 8.9e-06 55.1 102 35.3
Prupe.2G223900 Prunus persica HOM05D000122 ORTHO05D011214 8.9e-06 55.1 101 32.7
RcHm_v2.0_Chr1g0381801 Rosa chinensis HOM05D000122 ORTHO05D011214 8.9e-06 55.1 113 31.0


User provided reference genes

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