Gene: FAN09G3049

General Information

Structural Information

  • Species Fragaria x ananassa
  • Gene Identifier FAN09G3049
  • Transcript Identifier FAN09G3049.1
  • Gene Type Coding gene
  • Location Fvb6-2 : 34517899-34525182 : positive

Gene Family Information

  • ID HOM05D000122
  • #Genes/#Species 2793/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id maker-Fvb6-2-snap-gene-345.66.v1.0.a1
  • pacid 50468217

Descriptions

  • Description PF01535//PF12854//PF14432 - PPR repeat (PPR) // PPR repeat (PPR_1) // DYW family of nucleic acid deaminases (DYW_deaminase)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006811
ISO
PLAZA Homology (enrichment)ion transport HOM05D000122
GO:0055085
ISO
PLAZA Homology (enrichment)transmembrane transport HOM05D000122

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0004523
IEA
InterProRNA-DNA hybrid ribonuclease activity
GO:0008270
IEA
InterProzinc ion binding
GO:0005216
ISO
PLAZA Homology (enrichment)ion channel activity HOM05D000122

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
ISO
PLAZA Homology (enrichment)membrane HOM05D000122

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
IPR000595 Cyclic nucleotide-binding domain
IPR002156 Ribonuclease H domain
IPR014710 RmlC-like jelly roll fold
IPR018490 Cyclic nucleotide-binding-like
IPR044730 Ribonuclease H-like domain, plant type
IPR032867 DYW domain
Mapman id Description
24.3.2.4 Solute transport.channels.VIC superfamily.cyclic nucleotide-gated cation channel (CNGC)