Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G3099 Fragaria x ananassa HOM05D005995 ORTHO05D007362 1.3e-94 349.7 180 100.0
FAN21G0787 Fragaria x ananassa HOM05D005995 ORTHO05D007362 3.3e-90 335.1 180 96.7
FAN25G2223 Fragaria x ananassa HOM05D005995 ORTHO05D007362 1.1e-88 330.1 179 95.0
FvH4_3g39150 Fragaria vesca HOM05D005995 ORTHO05D007362 1.6e-84 316.2 180 92.2
FAN11G1452 Fragaria x ananassa HOM05D005995 ORTHO05D007362 1.0e-83 313.5 180 91.7
RcHm_v2.0_Chr5g0070551 Rosa chinensis HOM05D005995 ORTHO05D007362 3.0e-83 312.0 180 90.6
CiPaw.14G056700 Carya illinoinensis HOM05D005995 ORTHO05D007362 1.6e-68 263.1 179 77.1
Thecc.09G353200 Theobroma cacao HOM05D005995 ORTHO05D007362 3.0e-67 258.8 178 76.4
Duzib170G0863 Durio zibethinus HOM05D005995 ORTHO05D007362 3.9e-67 258.5 177 75.7
QL01p039263 Quercus lobata HOM05D005995 ORTHO05D007362 6.7e-67 257.7 178 74.7
CSS0037016 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 4.3e-66 255.0 178 76.4
CSS0047754 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 4.3e-66 255.0 178 76.4
Cpa.g.sc2.418 Carica papaya HOM05D005995 ORTHO05D007362 4.3e-66 255.0 180 75.0
CAN.G1095.10 Capsicum annuum HOM05D005995 ORTHO05D007362 6.3e-65 251.1 177 74.6
GSVIVG01024692001 Vitis vinifera HOM05D005995 ORTHO05D007362 6.3e-65 251.1 178 74.7
Sopen06g033540 Solanum pennellii HOM05D005995 ORTHO05D007362 1.1e-64 250.4 179 74.9
PGSC0003DMG400030447 Solanum tuberosum HOM05D005995 ORTHO05D007362 1.1e-64 250.4 179 74.9
TAR131G0002 Trochodendron aralioides HOM05D005995 ORTHO05D007362 2.4e-64 249.2 179 74.3
Ciclev10029374m.g Citrus clementina HOM05D005995 ORTHO05D007362 3.1e-64 248.8 179 73.2
MD03G1063100 Malus domestica HOM05D005995 ORTHO05D007362 3.1e-64 248.8 180 74.4
Haze_24375 Corylus avellana HOM05D005995 ORTHO05D007362 4.1e-64 248.4 179 74.9
Nn2g14523 Nelumbo nucifera HOM05D005995 ORTHO05D007362 4.1e-64 248.4 180 72.2
CiPaw.13G073700 Carya illinoinensis HOM05D005995 ORTHO05D007362 5.3e-64 248.1 167 76.0
Cc01_g14560 Coffea canephora HOM05D005995 ORTHO05D007362 9.1e-64 247.3 178 71.9
Solyc06g082160.4 Solanum lycopersicum HOM05D005995 ORTHO05D007362 1.5e-63 246.5 179 73.7
TAR623G0738 Trochodendron aralioides HOM05D005995 ORTHO05D007362 2.0e-63 246.1 179 73.7
arahy.Tifrunner.gnm1.ann1.SCP5PP Arachis hypogaea HOM05D005995 ORTHO05D007362 3.4e-63 245.4 183 71.6
COL.COLO4_11080 Corchorus olitorius HOM05D005995 ORTHO05D007362 3.4e-63 245.4 180 72.8
AUR62023851 Chenopodium quinoa HOM05D005995 ORTHO05D007362 5.9e-63 244.6 178 68.5
Nitab4.5_0013485g0010 Nicotiana tabacum HOM05D005995 ORTHO05D007362 7.7e-63 244.2 178 73.0
Hund06617 Selenicereus undatus HOM05D005995 ORTHO05D007362 7.7e-63 244.2 180 70.0
Phvul.006G070800 Phaseolus vulgaris HOM05D005995 ORTHO05D007362 1.3e-62 243.4 179 71.5
VMungo0540G0986 Vigna mungo HOM05D005995 ORTHO05D007362 2.2e-62 242.7 179 70.9
Manes.17G003200 Manihot esculenta HOM05D005995 ORTHO05D007362 2.9e-62 242.3 178 72.5
Potri.001G279700 Populus trichocarpa HOM05D005995 ORTHO05D007362 2.9e-62 242.3 177 72.9
Rhsim13G0066700 Rhododendron simsii HOM05D005995 ORTHO05D007362 2.9e-62 242.3 162 75.9
Glyma.11G168600 Glycine max HOM05D005995 ORTHO05D007362 3.8e-62 241.9 181 71.8
Aqoxy4G02443 Aquilegia oxysepala HOM05D005995 ORTHO05D007362 5.0e-62 241.5 180 70.0
MELO3C020526.2 Cucumis melo HOM05D005995 ORTHO05D007362 5.0e-62 241.5 178 70.2
CsaV3_1G036430 Cucumis sativus L. HOM05D005995 ORTHO05D007362 6.5e-62 241.1 178 69.7
Duzib168G2258 Durio zibethinus HOM05D005995 ORTHO05D007362 8.5e-62 240.7 178 72.5
EL10Ac3g05994 Beta vulgaris HOM05D005995 ORTHO05D007362 1.1e-61 240.4 180 67.8
Ca_14969_v3 Cicer arietinum L. HOM05D005995 ORTHO05D007362 2.5e-61 239.2 176 71.6
ClCG03G000500 Citrullus lanatus HOM05D005995 ORTHO05D007362 3.2e-61 238.8 178 69.1
Prupe.6G053100 Prunus persica HOM05D005995 ORTHO05D007362 3.2e-61 238.8 179 72.6
Lj6g0019722 Lotus japonicus HOM05D005995 ORTHO05D007362 4.2e-61 238.4 162 74.7
Glyma.18G060000 Glycine max HOM05D005995 ORTHO05D007362 5.5e-61 238.0 174 71.8
Cfa011735 Carpinus fangiana HOM05D005995 ORTHO05D007362 1.2e-60 236.9 179 72.6
Dinv09649 Davidia involucrata HOM05D002227 ORTHO05D002337 1.2e-60 236.9 153 80.4
Potri.009G074400 Populus trichocarpa HOM05D005995 ORTHO05D007362 2.7e-60 235.7 178 69.7
Sabra09G0056500 Salix brachista HOM05D005995 ORTHO05D007362 2.7e-60 235.7 178 70.2
Sed0015986 Sechium edule HOM05D005995 ORTHO05D007362 1.8e-59 233.0 178 67.4
CANSAT54G2854 Cannabis sativa HOM05D005995 ORTHO05D007362 2.3e-59 232.6 177 70.6
Actinidia23218 Actinidia chinensis HOM05D005995 ORTHO05D007362 5.1e-59 231.5 178 70.2
vmacro02942 Vaccinium macrocarpon HOM05D005995 ORTHO05D007362 5.1e-59 231.5 165 71.5
Lalb_Chr20g0114841 Lupinus albus HOM05D005995 ORTHO05D007362 2.0e-58 229.6 181 68.5
arahy.Tifrunner.gnm1.ann1.6174C5 Arachis hypogaea HOM05D005995 ORTHO05D007362 2.6e-58 229.2 166 71.7
MSTRG.10034 Avicennia marina HOM05D005995 ORTHO05D007362 2.6e-58 229.2 176 67.0
TAR633G2447 Trochodendron aralioides HOM05D005995 ORTHO05D007362 3.3e-58 228.8 182 68.7
Nitab4.5_0002043g0030 Nicotiana tabacum HOM05D005995 ORTHO05D007362 9.7e-58 227.3 178 69.1
Oeu031050.1 Olea europaea HOM05D005995 ORTHO05D007362 9.7e-58 227.3 173 69.9
DCAR_015647 Daucus carota HOM05D005995 ORTHO05D007362 1.3e-57 226.9 177 68.4
Gohir.A13G233500 Gossypium hirsutum HOM05D005995 ORTHO05D007362 1.3e-57 226.9 153 77.1
Medtr3g465040 Medicago truncatula HOM05D005995 ORTHO05D007362 1.3e-57 226.9 177 68.4
PGR031G2980 Punica granatum HOM05D005995 ORTHO05D007362 1.7e-57 226.5 179 67.0
Peaxi162Scf00540g00015 Petunia axillaris HOM05D005995 ORTHO05D007362 8.2e-57 224.2 178 69.1
SGA_v2.0_scaffold371G50155 Striga asiatica HOM05D005995 ORTHO05D007362 1.1e-56 223.8 162 67.3
MD11G1066800 Malus domestica HOM05D005995 ORTHO05D007362 1.4e-56 223.4 157 73.9
Psat0s2070g0120 Pisum sativum HOM05D005995 ORTHO05D007362 2.4e-56 222.6 178 66.9
MD11G1066600 Malus domestica HOM05D005995 ORTHO05D007362 1.2e-55 220.3 180 68.3
Eucgr.B02232 Eucalyptus grandis HOM05D005995 ORTHO05D007362 2.6e-55 219.2 149 75.8
TPR.G32896 Trifolium pratense HOM05D005995 ORTHO05D007362 2.6e-55 219.2 178 69.1
ATR0681G053 Amborella trichopoda HOM05D005995 ORTHO05D007362 5.0e-54 214.9 182 62.1
Sabra16G0173300 Salix brachista HOM05D005995 ORTHO05D007362 3.2e-53 212.2 207 59.9
Actinidia02782 Actinidia chinensis HOM05D005995 ORTHO05D007362 7.2e-53 211.1 135 80.7
Gohir.D13G239100 Gossypium hirsutum HOM05D005995 ORTHO05D007362 7.2e-53 211.1 153 73.2
Gorai.013G270000 Gossypium raimondii HOM05D005995 ORTHO05D007362 7.2e-53 211.1 153 73.2
Lalb_Chr18g0051191 Lupinus albus HOM05D005995 ORTHO05D007362 7.2e-53 211.1 180 65.0
Sp6g20270 Schrenkiella parvula HOM05D005995 ORTHO05D007362 3.6e-52 208.8 179 60.3
THA.LOC104799390 Tarenaya hassleriana HOM05D005995 ORTHO05D007362 3.9e-51 205.3 175 62.9
AL8G34810 Arabidopsis lyrata HOM05D005995 ORTHO05D007362 5.2e-51 204.9 174 60.3
AT5G58575 Arabidopsis thaliana HOM05D005995 ORTHO05D007362 8.8e-51 204.1 171 61.4
Migut.N00147 Erythranthe guttata HOM05D005995 ORTHO05D007362 4.4e-50 201.8 180 61.7
Carub.0008s1918 Capsella rubella HOM05D005995 ORTHO05D007362 5.7e-50 201.4 162 61.1
CDE10G1344 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 7.4e-50 201.1 161 62.7
PSO017G3188 Papaver somniferum HOM05D005995 ORTHO05D007362 7.4e-50 201.1 137 73.7
Sc06g0010410 Simmondsia chinensis HOM05D005995 ORTHO05D007362 9.7e-50 200.7 134 75.4
PSO170G4292 Papaver somniferum HOM05D005995 ORTHO05D007362 2.8e-49 199.1 137 73.0
CARHR272410 Cardamine hirsuta HOM05D005995 ORTHO05D007362 3.1e-48 195.7 175 58.9
Thhalv10014805m.g Eutrema salsugineum HOM05D005995 ORTHO05D007362 5.3e-48 194.9 180 59.4
HPP92_012020 Vanilla planifolia HOM05D005995 ORTHO05D007362 3.5e-47 192.2 176 61.9
ECA248G1932 Erigeron canadensis HOM05D005995 ORTHO05D007362 5.9e-47 191.4 133 70.7
HanXRQChr11g0334701 Helianthus annuus HOM05D005995 ORTHO05D007362 7.7e-47 191.0 129 72.9
Atru.chr3.4142 Acer truncatum HOM05D005995 ORTHO05D007362 1.0e-46 190.7 238 50.8
MD11G1152800 Malus domestica HOM05D005995 ORTHO05D007362 2.2e-46 189.5 114 81.6
Lsat_1_v5_gn_5_173181 Lactuca sativa HOM05D005995 ORTHO05D007362 5.0e-46 188.3 127 74.8
MBI03_g03955_MAGBIO Magnolia biondii HOM05D005995 ORTHO05D007362 8.5e-46 187.6 178 59.6
unitig_62.g23487 Utricularia gibba HOM05D005995 ORTHO05D007362 8.5e-46 187.6 178 60.1
CDE10G0962 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 1.1e-45 187.2 162 61.7
Sed0014404 Sechium edule HOM05D005995 ORTHO05D007362 2.5e-45 186.0 161 62.1
A03p12120 Brassica napus HOM05D005995 ORTHO05D007362 2.1e-44 183.0 138 63.8
BraA03t10524Z Brassica rapa HOM05D005995 ORTHO05D007362 2.7e-44 182.6 138 63.8
BcaC01g06637 Brassica carinata HOM05D005995 ORTHO05D007362 3.6e-44 182.2 135 64.4
BolC3t13867H Brassica oleracea HOM05D005995 ORTHO05D007362 8.0e-44 181.0 138 63.0
Aa31LG11G350 Aethionema arabicum HOM05D005995 ORTHO05D007362 1.0e-43 180.6 152 63.8
BcaB01g04505 Brassica carinata HOM05D005995 ORTHO05D007362 1.0e-43 180.6 158 58.2
TWI79G0924 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 6.7e-43 177.9 185 55.7
Lj1P130T21 Lonicera japonica HOM05D005995 ORTHO05D007362 8.8e-43 177.6 103 82.5
BcaNung06849 Brassica carinata HOM05D002227 ORTHO05D007362 1.8e-40 169.9 161 55.3
AUR62002337 Chenopodium quinoa HOM05D005995 ORTHO05D007362 2.0e-39 166.4 123 65.0
SEGI_16655 Sequoiadendron giganteum HOM05D005995 ORTHO05D007362 5.9e-39 164.9 156 54.5
Mapoly0008s0254 Marchantia polymorpha HOM05D005995 ORTHO05D007362 3.8e-38 162.2 173 52.0
Gohir.A05G107700 Gossypium hirsutum HOM05D005995 ORTHO05D007362 1.1e-37 160.6 179 54.7
Gohir.D05G107900 Gossypium hirsutum HOM05D005995 ORTHO05D007362 3.4e-34 149.1 159 54.7
Os05g0351500 Oryza sativa ssp. japonica HOM05D005995 ORTHO05D007362 5.7e-34 148.3 167 52.1
TWI31G1135 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 1.4e-32 143.7 141 56.7
Zm00001eb286290 Zea mays HOM05D005995 ORTHO05D007362 1.4e-32 143.7 187 46.5
Pp3c7_14690 Physcomitrium patens HOM05D005995 ORTHO05D007362 4.1e-32 142.1 141 56.7
C03p14210 Brassica napus HOM05D005995 ORTHO05D007362 1.1e-29 134.0 115 56.5
SMO358G0374 Selaginella moellendorffii HOM05D005995 ORTHO05D007362 8.3e-25 117.9 99 59.6
BcaC01g06639 Brassica carinata HOM05D005995 ORTHO05D007362 2.4e-24 116.3 140 47.1
Pp3c11_11530 Physcomitrium patens HOM05D001687 ORTHO05D001608 2.4e-24 116.3 141 48.2
MD11G1153100 Malus domestica HOM05D005995 ORTHO05D007362 1.2e-23 114.0 80 72.5
AagrBONN_evm.TU.Sc2ySwM_344.2127 Anthoceros agrestis HOM05D005995 ORTHO05D007362 1.0e-22 110.9 101 54.5
Gorai.009G112000 Gossypium raimondii HOM05D005995 ORTHO05D007362 2.9e-22 109.4 105 58.1
HPP92_013780 Vanilla planifolia HOM05D005995 ORTHO05D007362 4.0e-19 99.0 100 54.0
Actinidia32626 Actinidia chinensis HOM05D005995 ORTHO05D007362 4.4e-18 95.5 56 85.7
CBR_g49952 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-17 94.0 138 40.6
MD11G1071300 Malus domestica HOM05D005995 ORTHO05D007362 1.7e-17 93.6 81 60.5
Cre17.g719550 Chlamydomonas reinhardtii HOM05D005995 ORTHO05D007362 2.6e-10 69.7 50 60.0
Nn2g14856 Nelumbo nucifera HOM05D005995 ORTHO05D007362 6.4e-09 65.1 62 58.1
MD11G1071400 Malus domestica HOM05D005995 ORTHO05D007362 4.1e-08 62.4 42 78.6
Pp3c4_14820 Physcomitrium patens HOM05D005995 ORTHO05D311899 9.2e-08 61.2 116 38.8
MCO04G081 Micromonas commoda HOM05D005995 ORTHO05D007362 3.9e-06 55.8 124 33.9
Medtr6g460490 Medicago truncatula HOM05D005995 ORTHO05D007362 8.6e-06 54.7 32 75.0


User provided reference genes

Program Settings