Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G2871 Fragaria x ananassa HOM05D006512 ORTHO05D008027 0.0e+00 1386.3 913 100.0
FAN11G0896 Fragaria x ananassa HOM05D006512 ORTHO05D008027 0.0e+00 1308.5 913 88.2
FAN21G3399 Fragaria x ananassa HOM05D006512 ORTHO05D008027 0.0e+00 1282.7 933 89.9
FAN25G2516 Fragaria x ananassa HOM05D006512 ORTHO05D008027 0.0e+00 1258.0 933 88.6
RcHm_v2.0_Chr5g0040811 Rosa chinensis HOM05D006512 ORTHO05D008027 0.0e+00 1157.9 942 84.7
FAN25G1139 Fragaria x ananassa HOM05D006512 ORTHO05D008027 0.0e+00 1147.9 880 84.5
FvH4_3g23160 Fragaria vesca HOM05D006512 ORTHO05D008027 0.0e+00 1106.3 773 90.6
Prupe.4G218000 Prunus persica HOM05D006512 ORTHO05D008027 2.4e-261 906.0 930 67.8
Haze_09710 Corylus avellana HOM05D006512 ORTHO05D008027 3.0e-203 713.0 924 55.4
TWI39G1152 Tripterygium wilfordii HOM05D006512 ORTHO05D008027 5.6e-194 682.2 943 51.9
CiPaw.12G131800 Carya illinoinensis HOM05D006512 ORTHO05D008027 7.6e-183 645.2 926 53.2
Duzib213G0172 Durio zibethinus HOM05D006512 ORTHO05D008027 3.8e-182 642.9 949 55.5
Gohir.D05G372700 Gossypium hirsutum HOM05D006512 ORTHO05D008027 8.4e-182 641.7 931 56.0
MD11G1213200 Malus domestica HOM05D006512 ORTHO05D008027 1.2e-172 611.3 742 64.6
Sabra16G0234800 Salix brachista HOM05D006512 ORTHO05D008027 1.2e-172 611.3 977 45.9
CSS0043474 Camellia sinensis var. sinensis HOM05D006512 ORTHO05D008027 7.3e-170 602.1 992 52.6
TPR.G1164 Trifolium pratense HOM05D006512 ORTHO05D008027 4.8e-169 599.4 945 54.7
Thecc.07G032200 Theobroma cacao HOM05D006512 ORTHO05D008027 1.2e-167 594.7 936 57.6
arahy.Tifrunner.gnm1.ann1.DSL29X Arachis hypogaea HOM05D006512 ORTHO05D008027 4.5e-167 592.8 701 51.1
arahy.Tifrunner.gnm1.ann1.WH2E03 Arachis hypogaea HOM05D006512 ORTHO05D008027 1.3e-166 591.3 702 51.0
Glyma.02G293200 Glycine max HOM05D006512 ORTHO05D008027 3.8e-166 589.7 939 52.8
Medtr5g093560 Medicago truncatula HOM05D006512 ORTHO05D008027 8.4e-166 588.6 702 52.8
Glyma.14G021200 Glycine max HOM05D006512 ORTHO05D008027 1.9e-165 587.4 945 49.9
vmacro02216 Vaccinium macrocarpon HOM05D006512 ORTHO05D008027 7.1e-165 585.5 712 52.2
Atru.chr2.3489 Acer truncatum HOM05D006512 ORTHO05D008027 1.6e-164 584.3 951 51.0
Ciclev10007420m.g Citrus clementina HOM05D006512 ORTHO05D008027 2.7e-164 583.6 943 52.7
CANSAT11G0281 Cannabis sativa HOM05D006512 ORTHO05D008027 3.3e-162 576.6 930 49.5
VMungo0647G0540 Vigna mungo HOM05D006512 ORTHO05D008027 1.7e-158 564.3 947 47.6
QL08p009135 Quercus lobata HOM05D006512 ORTHO05D008027 6.4e-158 562.4 780 58.8
Lj1C877G6 Lonicera japonica HOM05D006512 ORTHO05D008027 2.1e-153 547.4 939 51.8
Actinidia32260 Actinidia chinensis HOM05D006512 ORTHO05D008027 1.5e-151 541.2 931 50.8
TAR626G0449 Trochodendron aralioides HOM05D006512 ORTHO05D008027 5.8e-151 539.3 969 47.5
Gorai.009G441100 Gossypium raimondii HOM05D006512 ORTHO05D008027 9.3e-149 531.9 784 58.3
Nitab4.5_0001393g0060 Nicotiana tabacum HOM05D006512 ORTHO05D008027 8.7e-147 525.4 727 47.5
Potri.001G356800 Populus trichocarpa HOM05D006512 ORTHO05D008027 1.9e-146 524.2 820 52.4
Cpa.g.sc12.276 Carica papaya HOM05D006512 ORTHO05D008027 1.1e-144 518.5 577 55.8
Duzib170G0430 Durio zibethinus HOM05D006512 ORTHO05D008027 1.0e-142 511.9 776 54.4
Nitab4.5_0004829g0090 Nicotiana tabacum HOM05D006512 ORTHO05D008027 3.2e-141 506.9 687 47.6
Nn1g07218 Nelumbo nucifera HOM05D006512 ORTHO05D008027 4.2e-141 506.5 781 45.5
Oeu024915.1 Olea europaea HOM05D006512 ORTHO05D008027 2.3e-139 500.7 658 49.2
Phvul.008G270300 Phaseolus vulgaris HOM05D006512 ORTHO05D008027 3.9e-139 500.0 845 52.2
Manes.03G133700 Manihot esculenta HOM05D006512 ORTHO05D008027 8.8e-139 498.8 769 57.7
CAN.G492.3 Capsicum annuum HOM05D006512 ORTHO05D008027 3.3e-138 496.9 989 49.0
Gohir.A04G013500 Gossypium hirsutum HOM05D006512 ORTHO05D008027 4.3e-138 496.5 535 58.1
Sopen10g002210 Solanum pennellii HOM05D006512 ORTHO05D008027 7.4e-138 495.7 992 48.9
THA.LOC104811621 Tarenaya hassleriana HOM05D006512 ORTHO05D008027 8.2e-137 492.3 653 49.3
Hund23227 Selenicereus undatus HOM05D006512 ORTHO05D008027 5.3e-136 489.6 755 44.6
PGSC0003DMG400014387 Solanum tuberosum HOM05D006512 ORTHO05D008027 6.9e-136 489.2 1004 48.1
Ah.06g182620 Amaranthus hybridus HOM05D006512 ORTHO05D008027 4.2e-133 479.9 689 45.1
CSS0048002 Camellia sinensis var. sinensis HOM05D006512 ORTHO05D008027 1.6e-132 478.0 531 55.9
EL10Ac4g07766 Beta vulgaris HOM05D006512 ORTHO05D008027 2.1e-132 477.6 699 45.2
LjContig00272g0012578 Lotus japonicus HOM05D006512 ORTHO05D008027 6.1e-132 476.1 561 54.2
Aqoxy1G03389_Aqoxy1G03390 Aquilegia oxysepala HOM05D006512 ORTHO05D008027 3.9e-131 473.4 747 43.5
PGR083G0988 Punica granatum HOM05D006512 ORTHO05D008027 1.1e-128 465.3 563 49.2
ECA236G0056 Erigeron canadensis HOM05D006512 ORTHO05D008027 1.8e-128 464.5 686 44.9
PSO541G1419 Papaver somniferum HOM05D006512 ORTHO05D008027 2.4e-128 464.2 730 43.6
Peaxi162Scf01615g00010 Petunia axillaris HOM05D006512 ORTHO05D008027 2.4e-128 464.2 976 46.5
AUR62020400 Chenopodium quinoa HOM05D006512 ORTHO05D008027 7.0e-128 462.6 937 44.6
MBI07_g09094_MAGBIO Magnolia biondii HOM05D006512 ORTHO05D008027 7.0e-128 462.6 761 44.7
COL.COLO4_09692 Corchorus olitorius HOM05D006512 ORTHO05D008027 1.5e-127 461.5 583 51.3
AUR62015819 Chenopodium quinoa HOM05D006512 ORTHO05D008027 7.2e-125 452.6 948 44.0
Ca_06341_v3 Cicer arietinum L. HOM05D006512 ORTHO05D008027 2.6e-122 444.1 784 54.5
Migut.H01809 Erythranthe guttata HOM05D006512 ORTHO05D008027 9.7e-122 442.2 682 42.5
Eucgr.F00738 Eucalyptus grandis HOM05D006512 ORTHO05D008027 6.5e-118 429.5 511 53.6
Oeu041836.1 Olea europaea HOM05D006512 ORTHO05D008027 2.5e-117 427.6 829 48.4
Lsat_1_v5_gn_7_111120 Lactuca sativa HOM05D006512 ORTHO05D008027 3.2e-117 427.2 616 47.1
Thhalv10015403m.g Eutrema salsugineum HOM05D006512 ORTHO05D008027 1.2e-116 425.2 684 43.1
A02p09890 Brassica napus HOM05D006512 ORTHO05D008027 2.3e-115 421.0 684 43.4
Sc03g0008470 Simmondsia chinensis HOM05D006512 ORTHO05D008027 2.3e-115 421.0 519 51.8
Carub.0008s1539 Capsella rubella HOM05D006512 ORTHO05D008027 4.0e-115 420.2 690 43.9
Aa31LG5G12080 Aethionema arabicum HOM05D006512 ORTHO05D008027 9.1e-112 409.1 714 41.7
BraA02t06053Z Brassica rapa HOM05D006512 ORTHO05D008027 2.7e-111 407.5 713 44.5
AL8G30600 Arabidopsis lyrata HOM05D006512 ORTHO05D008027 3.5e-111 407.1 723 41.9
BcaB05g22180 Brassica carinata HOM05D006512 ORTHO05D008027 1.3e-110 405.2 684 43.4
C02p16450 Brassica napus HOM05D006512 ORTHO05D008027 2.2e-110 404.4 656 42.8
BcaC03g14267 Brassica carinata HOM05D006512 ORTHO05D008027 1.1e-109 402.1 656 42.5
BolC2t07744H Brassica oleracea HOM05D006512 ORTHO05D008027 4.2e-109 400.2 661 42.2
Solyc10g006260.3 Solanum lycopersicum HOM05D006512 ORTHO05D008027 4.7e-108 396.7 850 50.1
DCAR_022584 Daucus carota HOM05D006512 ORTHO05D008027 1.0e-107 395.6 701 41.9
PSO675G4144 Papaver somniferum HOM05D006512 ORTHO05D008027 2.7e-103 380.9 600 45.2
SGA_v2.0_scaffold172G39010 Striga asiatica HOM05D006512 ORTHO05D008027 1.0e-102 379.0 722 40.3
ATR0585G019 Amborella trichopoda HOM05D006512 ORTHO05D008027 5.5e-101 373.2 631 42.0
Psat2g014000 Pisum sativum HOM05D006512 ORTHO05D008027 2.8e-97 360.9 757 50.7
Lalb_Chr17g0348651 Lupinus albus HOM05D006512 ORTHO05D008027 1.1e-96 359.0 521 48.2
GSVIVG01037687001 Vitis vinifera HOM05D006512 ORTHO05D008027 3.5e-95 354.0 640 48.1
HPP92_009832 Vanilla planifolia HOM05D006512 ORTHO05D008027 8.6e-94 349.4 751 38.3
HanXRQChr11g0335931 Helianthus annuus HOM05D006512 ORTHO05D008027 1.2e-90 339.0 827 42.8
Os01g0698100 Oryza sativa ssp. japonica HOM05D006512 ORTHO05D008027 4.9e-89 333.6 758 36.4
unitig_899.g15285 Utricularia gibba HOM05D006512 ORTHO05D008027 5.0e-86 323.6 762 35.4
Dinv40780 Davidia involucrata HOM05D006512 ORTHO05D008027 6.8e-83 313.2 613 55.5
Actinidia05076 Actinidia chinensis HOM05D006512 ORTHO05D008027 3.7e-81 307.4 356 50.8
SEGI_25925 Sequoiadendron giganteum HOM05D006512 ORTHO05D008027 8.3e-81 306.2 809 34.7
SHI26585 Sapria himalayana HOM05D006512 ORTHO05D008027 5.4e-80 303.5 771 32.8
CDE04G1000 Ceratophyllum demersum HOM05D006512 ORTHO05D008027 1.1e-77 295.8 607 39.5
Sp6g17030 Schrenkiella parvula HOM05D006512 ORTHO05D008027 5.6e-77 293.5 546 40.1
Actinidia26683 Actinidia chinensis HOM05D006512 ORTHO05D008027 8.1e-76 289.7 301 54.8
AT5G55100 Arabidopsis thaliana HOM05D006512 ORTHO05D008027 1.0e-62 246.1 503 40.8
Rhsim06G0220200 Rhododendron simsii HOM05D006512 ORTHO05D008027 1.7e-62 245.4 949 32.8
Mapoly0045s0119 Marchantia polymorpha HOM05D006512 ORTHO05D008027 2.6e-58 231.5 761 31.9
Cc05_g14000 Coffea canephora HOM05D006512 ORTHO05D008027 9.9e-58 229.6 660 47.6
MBI07_g37843_MAGBIO Magnolia biondii HOM05D006512 ORTHO05D008027 8.4e-57 226.5 571 35.2
Zm00001eb360910 Zea mays HOM05D006512 ORTHO05D008027 3.2e-40 171.4 559 31.8
MD11G1213100 Malus domestica HOM05D006512 ORTHO05D008027 5.7e-29 134.0 147 55.1
GSVIVG01037689001 Vitis vinifera HOM05D006512 ORTHO05D008027 1.5e-26 125.9 143 47.6
QL08p009130 Quercus lobata HOM05D006512 ORTHO05D008027 2.6e-26 125.2 140 51.4
Lalb_Chr17g0348641 Lupinus albus HOM05D006512 ORTHO05D008027 2.9e-25 121.7 140 50.7
CARHR268440 Cardamine hirsuta HOM05D006512 ORTHO05D008027 1.9e-24 119.0 142 45.8
Eucgr.F00737 Eucalyptus grandis HOM05D006512 ORTHO05D008027 4.2e-24 117.9 147 53.7
Cc05_g14010 Coffea canephora HOM05D006512 ORTHO05D008027 4.6e-23 114.4 143 47.6
FvH4_2g00353 Fragaria vesca HOM05D006512 ORTHO05D008027 1.5e-21 109.4 61 86.9
HanXRQChr11g0335921 Helianthus annuus HOM05D006512 ORTHO05D008027 7.4e-21 107.1 143 44.1
Solyc10g006250.3 Solanum lycopersicum HOM05D006512 ORTHO05D008027 5.3e-19 100.9 142 45.1
CANSAT56G4300 Cannabis sativa HOM05D006512 ORTHO05D008027 2.2e-17 95.5 134 43.3
CBR_g49368 Chara braunii HOM05D000019 ORTHO05D000048 1.0e-09 70.1 80 46.2
Cpa.g.c37452 Carica papaya HOM05D006512 ORTHO05D008027 1.7e-09 69.3 63 66.7
VMungo0251G0907 Vigna mungo HOM05D001291 ORTHO05D008027 1.7e-09 69.3 54 66.7
Nn6g32350 Nelumbo nucifera HOM05D006512 ORTHO05D008027 8.5e-09 67.0 156 39.7
Cre11.g481700 Chlamydomonas reinhardtii HOM05D006512 ORTHO05D008027 1.1e-08 66.6 71 45.1
A06p10690 Brassica napus HOM05D002594 ORTHO05D003499 6.7e-06 57.4 86 34.9
Actinidia02676 Actinidia chinensis HOM05D000736 ORTHO05D008027 8.8e-06 57.0 122 39.3
BcaB02g06534 Brassica carinata HOM05D002594 ORTHO05D003499 8.8e-06 57.0 84 35.7
BcaC05g25379 Brassica carinata HOM05D002594 ORTHO05D003499 8.8e-06 57.0 85 35.3
C05p12600 Brassica napus HOM05D002594 ORTHO05D003499 8.8e-06 57.0 85 35.3
BolC5t30004H Brassica oleracea HOM05D002594 ORTHO05D003499 8.8e-06 57.0 85 35.3
BraA06t24251Z Brassica rapa HOM05D002594 ORTHO05D003499 8.8e-06 57.0 86 34.9


User provided reference genes

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