Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN16G0020 Fragaria x ananassa HOM05D006389 ORTHO05D007863 6.6e-298 1026.5 502 100.0
FvH4_3g43320 Fragaria vesca HOM05D006389 ORTHO05D007863 5.1e-258 894.0 480 92.3
FAN11G1995 Fragaria x ananassa HOM05D006389 ORTHO05D007863 4.4e-257 891.0 480 91.9
FAN25G0313 Fragaria x ananassa HOM05D006389 ORTHO05D007863 3.2e-244 848.2 480 88.8
RcHm_v2.0_Chr5g0077431 Rosa chinensis HOM05D006389 ORTHO05D007863 5.0e-229 797.7 484 83.5
FAN21G1265 Fragaria x ananassa HOM05D002542 ORTHO05D005078 4.9e-208 728.0 404 89.4
Prupe.6G021400 Prunus persica HOM05D006389 ORTHO05D007863 4.3e-196 688.3 487 71.3
MD11G1027100 Malus domestica HOM05D006389 ORTHO05D007863 1.3e-192 676.8 487 70.2
QL01p005900 Quercus lobata HOM05D006389 ORTHO05D007863 2.8e-179 632.5 487 65.1
Cfa005620 Carpinus fangiana HOM05D006389 ORTHO05D007863 5.8e-177 624.8 487 64.1
CiPaw.14G122900 Carya illinoinensis HOM05D006389 ORTHO05D007863 1.8e-173 613.2 487 62.2
COL.COLO4_24825 Corchorus olitorius HOM05D006389 ORTHO05D007863 1.3e-171 607.1 487 62.6
Manes.06G168100 Manihot esculenta HOM05D006389 ORTHO05D007863 6.2e-171 604.7 504 59.9
TWI34G0575 Tripterygium wilfordii HOM05D006389 ORTHO05D007863 4.6e-166 588.6 489 61.3
Gorai.006G129600 Gossypium raimondii HOM05D006389 ORTHO05D007863 5.1e-165 585.1 452 64.2
Gohir.D09G111800 Gossypium hirsutum HOM05D006389 ORTHO05D007863 1.9e-164 583.2 452 64.2
Gohir.A09G115200 Gossypium hirsutum HOM05D006389 ORTHO05D007863 2.5e-164 582.8 437 65.0
CsaV3_1G042620 Cucumis sativus L. HOM05D006389 ORTHO05D007863 5.6e-164 581.6 499 60.9
GSVIVG01025317001 Vitis vinifera HOM05D006389 ORTHO05D007863 3.7e-163 578.9 456 64.5
ClCG03G013410 Citrullus lanatus HOM05D006389 ORTHO05D007863 3.1e-162 575.9 502 60.2
Atru.chr3.2543 Acer truncatum HOM05D006389 ORTHO05D007863 2.6e-161 572.8 484 60.3
Glyma.11G130800 Glycine max HOM05D006389 ORTHO05D007863 2.6e-161 572.8 487 58.5
Potri.001G016800 Populus trichocarpa HOM05D006389 ORTHO05D007863 4.2e-159 565.5 499 58.7
Sed0000566 Sechium edule HOM05D006389 ORTHO05D007863 2.1e-158 563.1 449 63.3
PSO339G5502 Papaver somniferum HOM05D006389 ORTHO05D007863 6.0e-158 561.6 444 63.1
arahy.Tifrunner.gnm1.ann1.VM78M6 Arachis hypogaea HOM05D006389 ORTHO05D007863 1.5e-156 557.0 488 58.4
arahy.Tifrunner.gnm1.ann1.XMKE9J Arachis hypogaea HOM05D006389 ORTHO05D007863 6.3e-155 551.6 487 57.7
TAR623G0704 Trochodendron aralioides HOM05D006389 ORTHO05D007863 2.0e-153 546.6 466 60.7
Phvul.011G057100 Phaseolus vulgaris HOM05D006389 ORTHO05D007863 6.5e-152 541.6 450 59.3
PGR102G3332 Punica granatum HOM05D006389 ORTHO05D007863 9.4e-151 537.7 487 56.5
Lalb_Chr03g0026221 Lupinus albus HOM05D006389 ORTHO05D007863 2.1e-150 536.6 487 57.9
VMungo1127G1170 Vigna mungo HOM05D006389 ORTHO05D007863 7.9e-150 534.6 497 54.5
Nn7g36087 Nelumbo nucifera HOM05D006389 ORTHO05D007863 1.4e-149 533.9 487 56.7
Cpa.g.sc84.94 Carica papaya HOM05D006389 ORTHO05D007863 1.3e-147 527.3 512 53.5
DCAR_023759 Daucus carota HOM05D006389 ORTHO05D007863 3.7e-147 525.8 459 55.6
Oeu014062.1 Olea europaea HOM05D006389 ORTHO05D007863 8.2e-147 524.6 456 57.9
AUR62019259 Chenopodium quinoa HOM05D006389 ORTHO05D007863 1.8e-146 523.5 447 58.4
Nitab4.5_0003250g0030 Nicotiana tabacum HOM05D006389 ORTHO05D007863 2.4e-146 523.1 438 58.9
CAN.G409.1 Capsicum annuum HOM05D006389 ORTHO05D007863 3.1e-146 522.7 488 54.5
Sopen11g021140 Solanum pennellii HOM05D006389 ORTHO05D007863 6.9e-146 521.5 463 56.8
Cc01_g04330 Coffea canephora HOM05D006389 ORTHO05D007863 1.5e-145 520.4 492 53.9
Migut.N02297 Erythranthe guttata HOM05D006389 ORTHO05D007863 7.7e-145 518.1 451 56.1
Actinidia16300 Actinidia chinensis HOM05D006389 ORTHO05D007863 3.2e-143 512.7 485 56.7
Aqoxy1G00204 Aquilegia oxysepala HOM05D006389 ORTHO05D007863 1.4e-141 507.3 436 56.9
Haze_10646 Corylus avellana HOM05D006389 ORTHO05D007863 2.8e-139 499.6 596 48.2
Hund22074 Selenicereus undatus HOM05D006389 ORTHO05D007863 9.1e-138 494.6 436 56.2
Sabra01G0011800 Salix brachista HOM05D006389 ORTHO05D007863 1.3e-136 490.7 543 49.2
THA.LOC104799096 Tarenaya hassleriana HOM05D006389 ORTHO05D007863 1.3e-136 490.7 487 51.7
Dinv36295 Davidia involucrata HOM05D006389 ORTHO05D007863 3.6e-134 482.6 405 61.5
Medtr4g066000 Medicago truncatula HOM05D006389 ORTHO05D007863 1.4e-133 480.7 446 55.2
Aa31LG3G14700 Aethionema arabicum HOM05D006389 ORTHO05D007863 8.8e-133 478.0 442 53.8
Sc16g0011670 Simmondsia chinensis HOM05D006389 ORTHO05D007863 8.8e-133 478.0 376 62.0
Thecc.09G225900 Theobroma cacao HOM05D006389 ORTHO05D007863 1.5e-132 477.2 413 59.3
ECA238G3473 Erigeron canadensis HOM05D006389 ORTHO05D007863 1.7e-131 473.8 446 54.3
HanXRQChr13g0407081 Helianthus annuus HOM05D006389 ORTHO05D007863 8.2e-131 471.5 447 54.8
AT5G12920 Arabidopsis thaliana HOM05D006389 ORTHO05D007863 1.1e-130 471.1 446 53.1
Lsat_1_v5_gn_2_101040 Lactuca sativa HOM05D006389 ORTHO05D007863 1.8e-130 470.3 431 57.1
AL6G23480 Arabidopsis lyrata HOM05D006389 ORTHO05D007863 2.4e-130 469.9 474 51.1
Lj3g0001596 Lotus japonicus HOM05D006389 ORTHO05D007863 4.1e-130 469.2 484 51.4
A03p05690 Brassica napus HOM05D006389 ORTHO05D007863 4.5e-129 465.7 506 48.2
vmacro04176 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 7.7e-129 464.9 391 61.9
Sp6g31040 Schrenkiella parvula HOM05D006389 ORTHO05D007863 1.7e-128 463.8 449 51.9
BcaB01g05390 Brassica carinata HOM05D006389 ORTHO05D007863 2.2e-128 463.4 485 49.1
C03p06650 Brassica napus HOM05D006389 ORTHO05D007863 3.8e-128 462.6 506 48.0
Psat0s3083g0200 Pisum sativum HOM05D006389 ORTHO05D007863 3.8e-128 462.6 446 53.1
CARHR200530 Cardamine hirsuta HOM05D006389 ORTHO05D007863 1.9e-127 460.3 506 48.0
Carub.0006s1110 Capsella rubella HOM05D006389 ORTHO05D007863 3.2e-127 459.5 464 50.9
SalBow4G3167 Salvia bowleyana HOM05D006389 ORTHO05D007863 1.2e-126 457.6 484 48.8
MELO3C015208.2 Cucumis melo HOM05D006389 ORTHO05D007863 3.0e-125 453.0 454 54.6
BolC3t13171H Brassica oleracea HOM05D006389 ORTHO05D007863 6.3e-123 445.3 525 45.5
HanXRQChr14g0453091 Helianthus annuus HOM05D006389 ORTHO05D007863 1.1e-122 444.5 488 50.2
Ah.02g115890 Amaranthus hybridus HOM05D006389 ORTHO05D007863 1.4e-122 444.1 483 48.7
COL.COLO4_26371 Corchorus olitorius HOM05D006389 ORTHO05D007863 3.1e-122 443.0 426 55.6
BraA03t09908Z Brassica rapa HOM05D006389 ORTHO05D007863 1.7e-120 437.2 555 44.1
SGA_v2.0_scaffold3G01545 Striga asiatica HOM05D006389 ORTHO05D007863 5.0e-120 435.6 505 48.1
HanXRQChr13g0407091 Helianthus annuus HOM05D006389 ORTHO05D007863 3.2e-119 433.0 448 51.8
Thhalv10015483m.g Eutrema salsugineum HOM05D006389 ORTHO05D007863 1.4e-117 427.6 451 49.7
TPR.G13666 Trifolium pratense HOM05D006389 ORTHO05D007863 3.4e-116 422.9 451 51.2
Zm00001eb245730 Zea mays HOM05D006389 ORTHO05D007863 3.4e-116 422.9 489 47.9
SalBow4G2322 Salvia bowleyana HOM05D006389 ORTHO05D007863 6.3e-115 418.7 484 46.1
Rhsim13G0224700 Rhododendron simsii HOM05D006389 ORTHO05D007863 1.6e-113 414.1 528 46.4
AUR62000087 Chenopodium quinoa HOM05D006389 ORTHO05D007863 4.5e-113 412.5 438 50.9
ATR0605G326 Amborella trichopoda HOM05D006389 ORTHO05D007863 3.7e-107 392.9 446 47.3
AUR62043581 Chenopodium quinoa HOM05D006389 ORTHO05D007863 9.2e-106 388.3 438 48.4
Os02g0591600 Oryza sativa ssp. japonica HOM05D006389 ORTHO05D007863 1.6e-105 387.5 486 44.2
CDE06G1860 Ceratophyllum demersum HOM05D006389 ORTHO05D007863 3.5e-105 386.3 324 57.7
unitig_699.g19125 Utricularia gibba HOM05D006389 ORTHO05D007863 8.6e-104 381.7 329 55.9
HPP92_018945 Vanilla planifolia HOM05D006389 ORTHO05D007863 4.6e-97 359.4 443 43.8
HanXRQChr14g0455041 Helianthus annuus HOM05D006389 ORTHO05D007863 2.6e-92 343.6 300 56.7
PSO384G2577 Papaver somniferum HOM05D006389 ORTHO05D007863 7.0e-90 335.5 285 58.2
Eucgr.B03666 Eucalyptus grandis HOM05D006389 ORTHO05D007863 6.8e-85 318.9 272 57.4
Ca_20580_v3 Cicer arietinum L. HOM05D006389 ORTHO05D007863 2.0e-84 317.4 330 51.8
Hma1.2p1_0728F.1_g209350 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 2.0e-84 317.4 243 65.0
Nitab4.5_0000175g0150 Nicotiana tabacum HOM05D006389 ORTHO05D007863 9.9e-84 315.1 274 56.9
Solyc11g045510.3 Solanum lycopersicum HOM05D006389 ORTHO05D007863 8.3e-83 312.0 269 57.2
Pp3c6_27180 Physcomitrium patens HOM05D006389 ORTHO05D007863 1.1e-79 301.6 460 35.2
CSS0004435 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 2.6e-76 290.4 286 56.3
Mapoly0014s0037 Marchantia polymorpha HOM05D006389 ORTHO05D007863 6.6e-72 275.8 458 36.0
MSTRG.17573 Avicennia marina HOM05D006389 ORTHO05D007863 7.3e-63 245.7 192 59.9
Peaxi162Scf00559g00114 Petunia axillaris HOM05D006389 ORTHO05D007863 2.9e-59 233.8 193 57.5
MBI01_g14331_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 3.5e-57 226.9 160 66.2
SHI30505 Sapria himalayana HOM05D006389 ORTHO05D007863 2.5e-55 220.7 186 59.1
AagrBONN_evm.TU.Sc2ySwM_228.3166 Anthoceros agrestis HOM05D006389 ORTHO05D007863 8.1e-54 215.7 433 33.0
Hma1.2p1_0728F.1_g209340 Hydrangea macrophylla HOM05D006389 ORTHO05D007863 1.5e-52 211.5 172 62.2
Ciclev10018279m.g Citrus clementina HOM05D006389 ORTHO05D007863 4.5e-52 209.9 156 65.4
Ciclev10016567m.g Citrus clementina HOM05D006389 ORTHO05D007863 2.9e-51 207.2 207 51.7
Lj1A361T11 Lonicera japonica HOM05D006389 ORTHO05D007863 3.4e-44 183.7 187 50.8
CBR_g1099 Chara braunii HOM05D000019 ORTHO05D000002 6.9e-37 159.5 354 32.2
HanXRQChr14g0450961 Helianthus annuus HOM05D006389 ORTHO05D007863 1.6e-33 148.3 190 43.2
Nitab4.5_0000175g0160 Nicotiana tabacum HOM05D006389 ORTHO05D007863 4.8e-30 136.7 123 55.3
Peaxi162Scf00185g00310 Petunia axillaris HOM05D006389 ORTHO05D007863 3.3e-23 114.0 132 46.2
SHI30507 Sapria himalayana HOM05D006389 ORTHO05D007863 1.2e-20 105.5 91 57.1
MCO05G648 Micromonas commoda HOM05D006389 ORTHO05D007863 1.4e-16 92.0 359 25.6
CSS0015492 Camellia sinensis var. sinensis HOM05D006389 ORTHO05D007863 8.8e-16 89.4 72 58.3
HanXRQChr13g0389161 Helianthus annuus HOM05D006389 ORTHO05D007863 9.7e-15 85.9 53 69.8
arahy.Tifrunner.gnm1.ann1.RII35Q Arachis hypogaea HOM05D006389 ORTHO05D007863 2.6e-12 77.8 273 27.1
vmacro04177 Vaccinium macrocarpon HOM05D006389 ORTHO05D007863 8.5e-11 72.8 117 39.3
Psat4g014880 Pisum sativum HOM05D006389 ORTHO05D007863 2.5e-10 71.2 137 32.8
MBI01_g14332_MAGBIO Magnolia biondii HOM05D006389 ORTHO05D007863 2.6e-07 61.2 123 35.0
Prupe.6G030900 Prunus persica HOM05D000913 ORTHO05D000687 5.7e-07 60.1 34 76.5
SEGI_20259 Sequoiadendron giganteum HOM05D006389 ORTHO05D007863 2.2e-06 58.2 55 45.5


User provided reference genes

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