Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN15G2746 Fragaria x ananassa HOM05D004257 ORTHO05D005202 3.6e-186 654.8 348 100.0
FAN20G1479 Fragaria x ananassa HOM05D004257 ORTHO05D005202 8.4e-183 643.7 348 96.3
FAN24G1061 Fragaria x ananassa HOM05D004257 ORTHO05D005202 1.6e-181 639.4 348 95.4
FAN27G2888 Fragaria x ananassa HOM05D004257 ORTHO05D005202 1.3e-180 636.3 348 94.8
FvH4_2g21300 Fragaria vesca HOM05D004257 ORTHO05D005202 3.9e-180 634.8 349 95.1
RcHm_v2.0_Chr6g0287891 Rosa chinensis HOM05D004257 ORTHO05D005202 6.7e-172 607.4 353 90.7
Prupe.8G222200 Prunus persica HOM05D004257 ORTHO05D005202 4.3e-163 578.2 359 85.0
Sabra02G0030200 Salix brachista HOM05D004257 ORTHO05D005202 2.0e-160 569.3 348 82.8
Potri.002G037400 Populus trichocarpa HOM05D004257 ORTHO05D005202 3.4e-160 568.5 348 82.5
Duzib133G1463 Durio zibethinus HOM05D004257 ORTHO05D005202 5.8e-160 567.8 348 83.6
MD10G1182800 Malus domestica HOM05D004257 ORTHO05D005202 7.6e-160 567.4 363 82.9
Duzib138G0002 Durio zibethinus HOM05D004257 ORTHO05D005202 1.7e-159 566.2 348 83.0
Manes.12G033300 Manihot esculenta HOM05D004257 ORTHO05D005202 1.7e-159 566.2 323 87.6
ClCG07G001120 Citrullus lanatus HOM05D004257 ORTHO05D005202 3.8e-159 565.1 356 82.3
MD05G1195500 Malus domestica HOM05D004257 ORTHO05D005202 3.8e-159 565.1 363 84.8
QL09p039362 Quercus lobata HOM05D004257 ORTHO05D005202 5.0e-159 564.7 350 83.1
Thecc.01G256600 Theobroma cacao HOM05D004257 ORTHO05D005202 1.1e-158 563.5 348 82.2
Potri.005G225700 Populus trichocarpa HOM05D004257 ORTHO05D005202 2.5e-158 562.4 348 81.6
CsaV3_3G022160 Cucumis sativus L. HOM05D004257 ORTHO05D005202 3.2e-158 562.0 350 83.1
Gohir.D07G155600 Gossypium hirsutum HOM05D004257 ORTHO05D005202 3.2e-158 562.0 348 82.5
COL.COLO4_04031 Corchorus olitorius HOM05D004257 ORTHO05D005202 4.2e-158 561.6 348 82.5
Gorai.001G178500 Gossypium raimondii HOM05D004257 ORTHO05D005202 7.2e-158 560.8 348 82.2
Gohir.A07G149400 Gossypium hirsutum HOM05D004257 ORTHO05D005202 9.3e-158 560.5 348 81.9
CANSAT01G0143 Cannabis sativa HOM05D004257 ORTHO05D005202 6.1e-157 557.8 348 81.9
CSS0006901 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 3.9e-156 555.1 348 81.6
CSS0016221 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 3.9e-156 555.1 348 81.6
Dinv06012 Davidia involucrata HOM05D004257 ORTHO05D005202 3.9e-156 555.1 348 81.6
MELO3C012874.2 Cucumis melo HOM05D004257 ORTHO05D005202 1.1e-155 553.5 353 81.3
CANSAT35G1745 Cannabis sativa HOM05D004257 ORTHO05D005202 1.9e-155 552.7 351 81.2
TWI18G0956 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 2.5e-155 552.4 348 80.2
Cfa002439 Carpinus fangiana HOM05D004257 ORTHO05D005202 4.3e-155 551.6 348 81.0
Gohir.A11G131450 Gossypium hirsutum HOM05D004257 ORTHO05D005202 4.3e-155 551.6 349 81.9
Gohir.D11G137300 Gossypium hirsutum HOM05D004257 ORTHO05D005202 5.7e-155 551.2 349 81.9
Atru.chr5.1712 Acer truncatum HOM05D004257 ORTHO05D005202 7.4e-155 550.8 348 80.7
Ciclev10021043m.g Citrus clementina HOM05D004257 ORTHO05D005202 7.4e-155 550.8 323 83.9
Gorai.007G147100 Gossypium raimondii HOM05D004257 ORTHO05D005202 9.7e-155 550.4 349 81.7
CiPaw.03G265600 Carya illinoinensis HOM05D004257 ORTHO05D005202 2.2e-154 549.3 348 80.7
Sed0007154 Sechium edule HOM05D004257 ORTHO05D005202 2.8e-154 548.9 348 80.2
Nn3g19680 Nelumbo nucifera HOM05D004257 ORTHO05D005202 4.8e-154 548.1 348 80.7
Aqoxy2G03662 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 8.2e-154 547.4 351 79.8
Hma1.2p1_0075F.1_g039210 Hydrangea macrophylla HOM05D004257 ORTHO05D005202 1.1e-153 547.0 348 80.7
CiPaw.04G187400 Carya illinoinensis HOM05D004257 ORTHO05D005202 4.1e-153 545.0 348 79.6
MBI07_g16916_MAGBIO Magnolia biondii HOM05D004257 ORTHO05D005202 6.9e-153 544.3 364 77.5
Eucgr.K03257 Eucalyptus grandis HOM05D004257 ORTHO05D005202 9.0e-153 543.9 351 80.1
Medtr7g097060 Medicago truncatula HOM05D004257 ORTHO05D005202 9.0e-153 543.9 348 80.2
Psat3g056800 Pisum sativum HOM05D004257 ORTHO05D005202 9.0e-153 543.9 323 84.8
Actinidia38939 Actinidia chinensis HOM05D004257 ORTHO05D005202 1.2e-152 543.5 348 79.9
PSO832G0932 Papaver somniferum HOM05D004257 ORTHO05D005202 1.2e-152 543.5 348 78.7
Sed0014699 Sechium edule HOM05D004257 ORTHO05D005202 1.2e-152 543.5 354 79.4
TAR365G0817 Trochodendron aralioides HOM05D004257 ORTHO05D005202 1.2e-152 543.5 348 79.6
Ca_08681_v3 Cicer arietinum L. HOM05D004257 ORTHO05D005202 1.5e-152 543.1 348 80.2
Migut.O00233 Erythranthe guttata HOM05D004257 ORTHO05D005202 1.5e-152 543.1 326 83.7
vmacro10363 Vaccinium macrocarpon HOM05D004257 ORTHO05D005202 2.6e-152 542.3 355 79.7
Nitab4.5_0004454g0010 Nicotiana tabacum HOM05D004257 ORTHO05D005202 3.4e-152 542.0 348 79.3
PSO210G0560 Papaver somniferum HOM05D004257 ORTHO05D005202 4.5e-152 541.6 348 78.4
Lj5A229T68 Lonicera japonica HOM05D004257 ORTHO05D005202 5.9e-152 541.2 348 79.3
CAN.G637.23 Capsicum annuum HOM05D004257 ORTHO05D005202 7.7e-152 540.8 348 79.0
PGSC0003DMG402031052 Solanum tuberosum HOM05D004257 ORTHO05D005202 7.7e-152 540.8 348 79.0
THA.LOC104825258 Tarenaya hassleriana HOM05D004257 ORTHO05D005202 1.3e-151 540.0 348 79.9
TWI12G0832 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 1.7e-151 539.7 348 78.4
Haze_24645 Corylus avellana HOM05D004257 ORTHO05D005202 2.2e-151 539.3 376 75.5
DCAR_010071 Daucus carota HOM05D004257 ORTHO05D005202 2.2e-151 539.3 348 78.4
SGA_v2.0_scaffold90G27780 Striga asiatica HOM05D004257 ORTHO05D005202 2.2e-151 539.3 348 79.0
TAR362G0002 Trochodendron aralioides HOM05D004257 ORTHO05D005202 3.8e-151 538.5 348 79.6
Peaxi162Scf00171g00722 Petunia axillaris HOM05D004257 ORTHO05D005202 8.5e-151 537.3 348 79.0
Cpa.g.sc473.3 Carica papaya HOM05D004257 ORTHO05D005202 1.4e-150 536.6 338 82.0
MSTRG.23192 Avicennia marina HOM05D004257 ORTHO05D005202 3.2e-150 535.4 326 82.2
PGR044G0150 Punica granatum HOM05D004257 ORTHO05D005202 4.2e-150 535.0 351 79.2
BcaC08g44693 Brassica carinata HOM05D004257 ORTHO05D005202 5.5e-150 534.6 348 77.6
C06p22290 Brassica napus HOM05D004257 ORTHO05D005202 5.5e-150 534.6 348 77.6
Sopen03g028840 Solanum pennellii HOM05D004257 ORTHO05D005202 7.2e-150 534.3 348 78.2
Hund06906 Selenicereus undatus HOM05D004257 ORTHO05D005202 1.6e-149 533.1 348 77.9
AUR62040921 Chenopodium quinoa HOM05D004257 ORTHO05D005202 2.1e-149 532.7 346 78.0
Solyc03g098140.3 Solanum lycopersicum HOM05D004257 ORTHO05D005202 2.7e-149 532.3 348 77.9
BolC6t37415H Brassica oleracea HOM05D004257 ORTHO05D005202 3.6e-149 531.9 348 77.3
PSO675G8702 Papaver somniferum HOM05D004257 ORTHO05D005202 3.6e-149 531.9 348 76.4
PSO675G6112 Papaver somniferum HOM05D004257 ORTHO05D005202 4.6e-149 531.6 348 76.4
AUR62004833 Chenopodium quinoa HOM05D004257 ORTHO05D005202 6.1e-149 531.2 346 78.0
PSO675G8755 Papaver somniferum HOM05D004257 ORTHO05D005202 1.0e-148 530.4 348 76.1
Sc09g0004250 Simmondsia chinensis HOM05D004257 ORTHO05D005202 1.0e-148 530.4 348 78.4
BcaB02g07726 Brassica carinata HOM05D004257 ORTHO05D005202 1.8e-148 529.6 349 78.2
Ah.04g163130 Amaranthus hybridus HOM05D004257 ORTHO05D005202 3.0e-148 528.9 348 76.4
AT3G54690 Arabidopsis thaliana HOM05D004257 ORTHO05D005202 3.0e-148 528.9 351 76.9
Cc04_g09710 Coffea canephora HOM05D004257 ORTHO05D005202 3.0e-148 528.9 348 77.3
BcaC02g09050 Brassica carinata HOM05D004257 ORTHO05D005202 3.9e-148 528.5 348 77.0
C04p37820 Brassica napus HOM05D004257 ORTHO05D005202 3.9e-148 528.5 348 77.0
BolC4t25358H Brassica oleracea HOM05D004257 ORTHO05D005202 3.9e-148 528.5 348 77.0
VMungo1383G3387 Vigna mungo HOM05D004257 ORTHO05D005202 3.9e-148 528.5 352 77.0
Aqoxy5G00217 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 6.7e-148 527.7 352 78.4
arahy.Tifrunner.gnm1.ann1.63G7RJ Arachis hypogaea HOM05D004257 ORTHO05D005202 6.7e-148 527.7 323 81.7
Glyma.19G165400 Glycine max HOM05D004257 ORTHO05D005202 8.8e-148 527.3 349 77.1
AL5G35770 Arabidopsis lyrata HOM05D004257 ORTHO05D005202 1.1e-147 526.9 351 76.6
Phvul.001G161500 Phaseolus vulgaris HOM05D004257 ORTHO05D005202 1.1e-147 526.9 325 81.5
A04p05160 Brassica napus HOM05D004257 ORTHO05D005202 2.5e-147 525.8 348 77.0
BraA04t16226Z Brassica rapa HOM05D004257 ORTHO05D005202 2.5e-147 525.8 348 77.0
Thhalv10010498m.g Eutrema salsugineum HOM05D004257 ORTHO05D005202 2.5e-147 525.8 353 75.9
Aa31sc35G30 Aethionema arabicum HOM05D004257 ORTHO05D005202 4.3e-147 525.0 348 76.4
CARHR164610 Cardamine hirsuta HOM05D004257 ORTHO05D005202 4.3e-147 525.0 354 76.0
Lj1g0005279 Lotus japonicus HOM05D004257 ORTHO05D005202 5.7e-147 524.6 323 81.4
MSTRG.11529 Avicennia marina HOM05D004257 ORTHO05D005202 7.4e-147 524.2 319 81.5
Carub.0005s2129 Capsella rubella HOM05D004257 ORTHO05D005202 7.4e-147 524.2 355 75.2
DCAR_014267 Daucus carota HOM05D004257 ORTHO05D005202 3.7e-146 521.9 323 80.5
Lalb_Chr01g0019631 Lupinus albus HOM05D004257 ORTHO05D005202 1.8e-145 519.6 348 76.4
Sp5g07760 Schrenkiella parvula HOM05D004257 ORTHO05D005202 3.1e-145 518.8 354 75.4
arahy.Tifrunner.gnm1.ann1.BG7UA0 Arachis hypogaea HOM05D004257 ORTHO05D005202 1.2e-144 516.9 344 77.0
Lsat_1_v5_gn_3_39581 Lactuca sativa HOM05D004257 ORTHO05D005202 2.6e-144 515.8 348 77.6
HanXRQChr17g0542071 Helianthus annuus HOM05D004257 ORTHO05D005202 4.5e-144 515.0 348 77.6
Nitab4.5_0000936g0060 Nicotiana tabacum HOM05D004257 ORTHO05D005202 5.9e-144 514.6 334 78.4
CSS0001153 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 3.8e-143 511.9 350 76.9
TPR.G7131 Trifolium pratense HOM05D004257 ORTHO05D005202 5.0e-143 511.5 389 71.2
CSS0049630 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 2.2e-138 496.1 349 75.9
BraA07t29902Z Brassica rapa HOM05D004257 ORTHO05D005202 5.3e-137 491.5 348 73.6
ATR0736G010 Amborella trichopoda HOM05D004257 ORTHO05D005202 4.2e-134 481.9 348 70.4
HPP92_017366 Vanilla planifolia HOM05D004257 ORTHO05D005202 9.4e-134 480.7 349 71.6
BcaC05g28242 Brassica carinata HOM05D004257 ORTHO05D005202 2.7e-133 479.2 348 72.4
BolC5t33007H Brassica oleracea HOM05D004257 ORTHO05D005202 2.7e-133 479.2 348 72.4
HPP92_010358 Vanilla planifolia HOM05D004257 ORTHO05D005202 2.3e-132 476.1 349 69.9
Oeu023635.1 Olea europaea HOM05D004257 ORTHO05D005202 4.4e-131 471.9 325 73.8
Mapoly0023s0132 Marchantia polymorpha HOM05D004257 ORTHO05D005202 1.2e-128 463.8 316 71.8
Zm00001eb207770 Zea mays HOM05D004257 ORTHO05D005202 2.0e-128 463.0 353 67.1
GSVIVG01028350001 Vitis vinifera HOM05D004257 ORTHO05D005202 2.7e-128 462.6 348 70.1
Os02g0158300 Oryza sativa ssp. japonica HOM05D004257 ORTHO05D005202 3.5e-128 462.2 352 67.6
CSS0045427 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 7.7e-128 461.1 350 72.6
CDE04G1210 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 1.0e-127 460.7 302 76.5
Zm00001eb232580 Zea mays HOM05D004257 ORTHO05D005202 3.8e-127 458.8 353 66.3
AagrBONN_evm.TU.Sc2ySwM_344.3818 Anthoceros agrestis HOM05D004257 ORTHO05D005202 5.0e-127 458.4 315 72.1
AagrBONN_evm.TU.Sc2ySwM_344.1200 Anthoceros agrestis HOM05D004257 ORTHO05D005202 3.2e-126 455.7 315 71.1
unitig_0.g1405 Utricularia gibba HOM05D004257 ORTHO05D005202 1.8e-124 449.9 326 71.8
SalBow5G3197 Salvia bowleyana HOM05D004257 ORTHO05D005202 5.2e-124 448.4 271 81.9
SalBow5G4297 Salvia bowleyana HOM05D004257 ORTHO05D005202 5.2e-124 448.4 271 81.9
SMO367G0216 Selaginella moellendorffii HOM05D004257 ORTHO05D005202 2.0e-123 446.4 315 69.5
CDE02G1046 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 2.2e-122 443.0 349 67.0
unitig_61.g26464 Utricularia gibba HOM05D004257 ORTHO05D005202 2.7e-120 436.0 323 70.3
Pp3c23_13620 Physcomitrium patens HOM05D004257 ORTHO05D005202 1.2e-112 410.6 318 63.5
EL10Ac4g09002 Beta vulgaris HOM05D004257 ORTHO05D005202 2.7e-112 409.5 278 74.8
CBR_g20340 Chara braunii HOM05D004257 ORTHO05D005202 3.8e-111 405.6 327 62.4
Pp3c5_14840 Physcomitrium patens HOM05D004257 ORTHO05D005202 6.1e-109 398.3 326 62.6
ECA246G4101 Erigeron canadensis HOM05D004257 ORTHO05D005202 4.0e-108 395.6 231 84.8
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 7.3e-102 374.8 228 80.3
C05p42800 Brassica napus HOM05D004257 ORTHO05D005202 1.2e-101 374.0 256 74.6
BcaB02g08451 Brassica carinata HOM05D004257 ORTHO05D005202 3.1e-92 342.8 199 83.4
Pp3c24_11040 Physcomitrium patens HOM05D004257 ORTHO05D005202 5.2e-84 315.5 298 57.0
PSO470G0001 Papaver somniferum HOM05D004257 ORTHO05D005202 1.1e-81 307.8 215 72.6
CAN.G65.83 Capsicum annuum HOM05D004257 ORTHO05D005202 5.1e-79 298.9 248 64.5
SGA_v2.0_scaffold25G10776 Striga asiatica HOM05D004257 ORTHO05D005202 3.6e-69 266.2 185 75.1
SEGI_22917 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 5.3e-68 262.3 182 69.2
SEGI_29481 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 5.3e-68 262.3 182 69.2
AagrBONN_evm.TU.Sc2ySwM_228.5393 Anthoceros agrestis HOM05D004257 ORTHO05D005202 6.2e-61 238.8 165 70.3
A07p22230 Brassica napus HOM05D004257 ORTHO05D005202 3.0e-55 219.9 131 81.7
Actinidia34751 Actinidia chinensis HOM05D000378 ORTHO05D005202 2.5e-54 216.9 119 87.4
Oeu036414.1 Olea europaea HOM05D004257 ORTHO05D005202 3.3e-54 216.5 123 86.2
SEGI_04972 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 1.5e-51 207.6 122 78.7
BcaC07g39794 Brassica carinata HOM05D004257 ORTHO05D005202 2.1e-45 187.2 164 61.0
BolC8t50595H Brassica oleracea HOM05D004257 ORTHO05D005202 6.3e-45 185.7 164 61.6
C08p29840 Brassica napus HOM05D004257 ORTHO05D005202 3.4e-43 179.9 164 60.4
AagrBONN_evm.TU.Sc2ySwM_228.5394 Anthoceros agrestis HOM05D004257 ORTHO05D005202 2.4e-36 157.1 127 61.4
Peaxi162Scf00643g00656 Petunia axillaris HOM05D004257 ORTHO05D005202 8.2e-29 132.1 118 63.6
Lsat_1_v5_gn_8_28701 Lactuca sativa HOM05D004257 ORTHO05D005202 1.5e-27 127.9 92 75.0
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 2.2e-26 124.0 164 45.7
EL10Ac4g09003 Beta vulgaris HOM05D004257 ORTHO05D005202 8.5e-26 122.1 70 85.7
Rhsim05G0133300 Rhododendron simsii HOM05D004257 ORTHO05D005202 5.5e-25 119.4 92 68.5
Lj6g0021985 Lotus japonicus HOM05D004257 ORTHO05D236371 7.0e-20 102.4 78 62.8
Rhsim08G0010200 Rhododendron simsii HOM05D000535 ORTHO05D000427 1.0e-18 98.6 71 67.6
Pp3c2_23370 Physcomitrium patens HOM05D004257 ORTHO05D005202 1.0e-15 88.6 111 45.9
BcaB01g01067 Brassica carinata HOM05D004257 ORTHO05D092693 1.3e-13 81.6 78 53.8
Rhsim04G0042100 Rhododendron simsii HOM05D004257 ORTHO05D005202 2.2e-13 80.9 138 42.0
Lsat_1_v5_gn_6_26721 Lactuca sativa HOM05D004257 ORTHO05D230427 3.8e-10 70.1 66 60.6
RhsimUnG0176200 Rhododendron simsii HOM05D000026 ORTHO05D000127 6.1e-08 62.8 51 62.7
CDE04G3164 Ceratophyllum demersum HOM05D004257 ORTHO05D130150 5.2e-07 59.7 36 69.4


User provided reference genes

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