Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G0904 Fragaria x ananassa HOM05D007405 ORTHO05D009256 2.2e-115 420.6 674 100.0
FAN14G4765 Fragaria x ananassa HOM05D007405 ORTHO05D009256 2.2e-115 420.6 674 100.0
FAN09G1987 Fragaria x ananassa HOM05D007405 ORTHO05D009256 5.9e-108 396.0 674 96.4
FAN02G3519 Fragaria x ananassa HOM05D007405 ORTHO05D009256 3.8e-107 393.3 674 94.5
FvH4_6g49520 Fragaria vesca HOM05D007405 ORTHO05D009256 1.2e-103 381.7 664 98.0
FAN05G4748 Fragaria x ananassa HOM05D007405 ORTHO05D009256 2.7e-97 360.5 674 83.5
FAN02G3321 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.1e-90 338.6 188 94.7
RcHm_v2.0_Chr2g0169431 Rosa chinensis HOM05D007405 ORTHO05D009256 7.8e-68 262.7 683 84.6
Prupe.3G273600 Prunus persica HOM05D007405 ORTHO05D009256 2.1e-57 228.0 673 71.6
MD09G1044200 Malus domestica HOM05D007405 ORTHO05D009256 1.8e-56 224.9 672 85.7
Sabra17G0067600 Salix brachista HOM05D007405 ORTHO05D009256 7.1e-53 213.0 571 83.4
Sopen02g032330 Solanum pennellii HOM05D007405 ORTHO05D009256 7.8e-52 209.5 555 80.5
Potri.017G075700 Populus trichocarpa HOM05D007405 ORTHO05D009256 3.0e-51 207.6 571 83.2
Solyc02g087560.1 Solanum lycopersicum HOM05D007405 ORTHO05D009256 1.5e-50 205.3 550 80.7
GSVIVG01032591001 Vitis vinifera HOM05D007405 ORTHO05D009256 3.6e-49 200.7 567 82.5
Cfa007501 Carpinus fangiana HOM05D007405 ORTHO05D009256 8.1e-49 199.5 581 77.1
ClCG10G014780 Citrullus lanatus HOM05D007405 ORTHO05D009256 1.1e-48 199.1 681 79.4
CiPaw.04G020600 Carya illinoinensis HOM05D007405 ORTHO05D009256 3.1e-48 197.6 577 80.1
CANSAT64G0564 Cannabis sativa HOM05D007405 ORTHO05D009256 6.9e-48 196.4 576 79.9
Haze_14594 Corylus avellana HOM05D007405 ORTHO05D009256 9.0e-48 196.1 581 78.0
QL02p079911 Quercus lobata HOM05D007405 ORTHO05D009256 9.0e-48 196.1 556 82.0
AT5G39980 Arabidopsis thaliana HOM05D007405 ORTHO05D009256 2.0e-47 194.9 558 83.7
Sp7g02090 Schrenkiella parvula HOM05D007405 ORTHO05D009256 2.0e-47 194.9 563 83.5
AL7G50110 Arabidopsis lyrata HOM05D007405 ORTHO05D009256 2.6e-47 194.5 564 82.8
CARHR262150 Cardamine hirsuta HOM05D007405 ORTHO05D009256 1.7e-46 191.8 567 82.7
EL10Ac2g02615 Beta vulgaris HOM05D007405 ORTHO05D009256 1.1e-45 189.1 524 82.3
AUR62018305 Chenopodium quinoa HOM05D007405 ORTHO05D009256 1.1e-45 189.1 525 86.3
CsaV3_3G041760 Cucumis sativus L. HOM05D007405 ORTHO05D009256 1.4e-45 188.7 534 80.0
AUR62030576 Chenopodium quinoa HOM05D007405 ORTHO05D009256 4.2e-45 187.2 525 85.9
MELO3C009896.2 Cucumis melo HOM05D007405 ORTHO05D009256 7.1e-45 186.4 556 78.6
CSS0008879 Camellia sinensis var. sinensis HOM05D007405 ORTHO05D009256 9.3e-45 186.0 559 80.5
Oeu027767.1 Olea europaea HOM05D007405 ORTHO05D009256 2.7e-44 184.5 657 79.6
MSTRG.19401 Avicennia marina HOM05D007405 ORTHO05D009256 3.5e-44 184.1 561 77.7
CAN.G206.101 Capsicum annuum HOM05D007405 ORTHO05D009256 1.0e-43 182.6 142 64.8
Ah.10g031180 Amaranthus hybridus HOM05D007405 ORTHO05D009256 3.0e-43 181.0 525 81.1
Lsat_1_v5_gn_2_90480 Lactuca sativa HOM05D007405 ORTHO05D009256 3.0e-43 181.0 663 81.9
Migut.H00884 Erythranthe guttata HOM05D007405 ORTHO05D009256 3.9e-43 180.6 190 52.1
TWI56G0828 Tripterygium wilfordii HOM05D007405 ORTHO05D009256 3.9e-43 180.6 189 57.1
A07p20170 Brassica napus HOM05D007405 ORTHO05D009256 6.6e-43 179.9 183 57.9
Ciclev10011224m.g Citrus clementina HOM05D007405 ORTHO05D009256 8.7e-43 179.5 199 53.3
Thhalv10028245m.g Eutrema salsugineum HOM05D007405 ORTHO05D009256 8.7e-43 179.5 191 54.5
Manes.17G025500 Manihot esculenta HOM05D007405 ORTHO05D009256 8.7e-43 179.5 177 57.1
Sed0003758 Sechium edule HOM05D007405 ORTHO05D009256 1.1e-42 179.1 560 77.7
BcaC08g44440 Brassica carinata HOM05D007405 ORTHO05D009256 1.5e-42 178.7 188 54.3
C06p18840 Brassica napus HOM05D007405 ORTHO05D009256 1.5e-42 178.7 188 54.3
BolC6t37089H Brassica oleracea HOM05D007405 ORTHO05D009256 1.5e-42 178.7 188 54.3
CSS0011088 Camellia sinensis var. sinensis HOM05D007405 ORTHO05D009256 1.9e-42 178.3 479 86.8
Nitab4.5_0002265g0130 Nicotiana tabacum HOM05D007405 ORTHO05D009256 2.5e-42 177.9 149 60.4
BraA07t29716Z Brassica rapa HOM05D007405 ORTHO05D009256 3.3e-42 177.6 183 57.4
HanXRQChr14g0449381 Helianthus annuus HOM05D007405 ORTHO05D009256 4.3e-42 177.2 139 59.0
VMungo1383G1541 Vigna mungo HOM05D007405 ORTHO05D009256 5.6e-42 176.8 509 81.7
Glyma.18G000700 Glycine max HOM05D007405 ORTHO05D009256 2.8e-41 174.5 514 80.2
Lj6g0001930 Lotus japonicus HOM05D007405 ORTHO05D009256 4.8e-41 173.7 141 63.1
Cc07_g02870 Coffea canephora HOM05D007405 ORTHO05D009256 6.2e-41 173.3 478 86.6
PGSC0003DMG400001306 Solanum tuberosum HOM05D007405 ORTHO05D009256 1.1e-40 172.6 478 86.6
Atru.chr8.2441 Acer truncatum HOM05D007405 ORTHO05D009256 1.4e-40 172.2 205 52.7
Glyma.11G256300 Glycine max HOM05D007405 ORTHO05D009256 1.4e-40 172.2 514 81.3
Duzib147G0736 Durio zibethinus HOM05D007405 ORTHO05D009256 1.8e-40 171.8 178 53.9
Carub.0007s3571 Capsella rubella HOM05D007405 ORTHO05D009256 2.4e-40 171.4 555 83.6
BcaB02g07958 Brassica carinata HOM05D007405 ORTHO05D009256 4.0e-40 170.6 187 52.4
SGA_v2.0_scaffold115G32153 Striga asiatica HOM05D007405 ORTHO05D009256 4.0e-40 170.6 187 51.3
Aa31LG9G1630 Aethionema arabicum HOM05D000330 ORTHO05D009256 5.3e-40 170.2 566 80.9
Dinv33696 Davidia involucrata HOM05D007405 ORTHO05D009256 6.9e-40 169.9 564 66.0
Lj7A402T45 Lonicera japonica HOM05D007405 ORTHO05D009256 9.0e-40 169.5 567 70.7
DCAR_011169 Daucus carota HOM05D007405 ORTHO05D009256 1.2e-39 169.1 180 53.9
Lalb_Chr23g0278451 Lupinus albus HOM05D007405 ORTHO05D009256 2.0e-39 168.3 173 53.8
Gohir.D07G222200 Gossypium hirsutum HOM05D007405 ORTHO05D009256 3.4e-39 167.5 176 54.5
Gorai.001G256500 Gossypium raimondii HOM05D007405 ORTHO05D009256 3.4e-39 167.5 176 54.5
Gohir.A07G215301 Gossypium hirsutum HOM05D007405 ORTHO05D009256 7.6e-39 166.4 192 51.6
Thecc.04G073000 Theobroma cacao HOM05D007405 ORTHO05D009256 9.9e-39 166.0 188 52.1
PGR031G2628 Punica granatum HOM05D007405 ORTHO05D009256 1.3e-38 165.6 113 70.8
THA.LOC104823926 Tarenaya hassleriana HOM05D007405 ORTHO05D009256 1.4e-37 162.2 674 80.6
Sc11g0006880 Simmondsia chinensis HOM05D007405 ORTHO05D009256 5.4e-37 160.2 547 80.4
TAR039G0001 Trochodendron aralioides HOM05D002295 ORTHO05D002789 3.5e-36 157.5 518 85.3
Actinidia36037 Actinidia chinensis HOM05D007405 ORTHO05D009256 6.7e-35 153.3 193 47.7
Cpa.g.sc14.54 Carica papaya HOM05D007405 ORTHO05D009256 1.1e-34 152.5 99 73.7
COL.COLO4_25223 Corchorus olitorius HOM05D000330 ORTHO05D000209 4.3e-34 150.6 104 68.3
TPR.G22753 Trifolium pratense HOM05D007405 ORTHO05D009256 5.6e-34 150.2 114 62.3
Medtr3g083680 Medicago truncatula HOM05D007405 ORTHO05D009256 9.6e-34 149.4 106 65.1
Psat5g105040 Pisum sativum HOM05D007405 ORTHO05D009256 2.8e-33 147.9 191 46.6
Nn1g09226 Nelumbo nucifera HOM05D007405 ORTHO05D009256 1.1e-32 146.0 143 54.5
Ca_16386_v3 Cicer arietinum L. HOM05D007405 ORTHO05D009256 3.1e-32 144.4 192 49.5
Ca_29700_v3 Cicer arietinum L. HOM05D007405 ORTHO05D009256 3.1e-32 144.4 192 49.5
PSO832G3067 Papaver somniferum HOM05D007405 ORTHO05D009256 4.0e-32 144.1 485 88.5
Rhsim10G0030900 Rhododendron simsii HOM05D007405 ORTHO05D009256 2.0e-31 141.7 95 71.6
PSO591G0419 Papaver somniferum HOM05D007405 ORTHO05D009256 3.8e-30 137.5 103 64.1
Phvul.001G268500 Phaseolus vulgaris HOM05D007405 ORTHO05D009256 7.9e-28 129.8 71 83.1
MBI08_g09795_MAGBIO Magnolia biondii HOM05D007405 ORTHO05D009256 1.0e-27 129.4 77 76.6
Peaxi162Scf00129g00512 Petunia axillaris HOM05D007405 ORTHO05D009256 1.1e-26 125.9 71 81.7
Nitab4.5_0000564g0400 Nicotiana tabacum HOM05D007405 ORTHO05D009256 6.2e-25 120.2 65 84.6
CDE06G2170 Ceratophyllum demersum HOM05D007405 ORTHO05D009256 8.2e-25 119.8 77 74.0
ATR1127G129 Amborella trichopoda HOM05D007405 ORTHO05D009256 1.4e-24 119.0 176 42.6
HPP92_019727 Vanilla planifolia HOM05D007405 ORTHO05D009256 4.2e-21 107.5 146 43.2
SEGI_22031 Sequoiadendron giganteum HOM05D007405 ORTHO05D009256 1.5e-18 99.0 77 59.7
Pp3c3_5760 Physcomitrium patens HOM05D007405 ORTHO05D009256 9.7e-18 96.3 102 42.2
Pp3c3_5764 Physcomitrium patens HOM05D007405 ORTHO05D009256 9.7e-18 96.3 102 42.2
AagrBONN_evm.TU.Sc2ySwM_117.2241 Anthoceros agrestis HOM05D007405 ORTHO05D009256 1.6e-17 95.5 101 43.6
Eucgr.J02141 Eucalyptus grandis HOM05D007405 ORTHO05D009256 2.8e-17 94.7 53 83.0
Mapoly0061s0076 Marchantia polymorpha HOM05D007405 ORTHO05D009256 1.5e-15 89.0 95 43.2
Zm00001eb148940 Zea mays HOM05D007405 ORTHO05D009256 3.4e-15 87.8 69 56.5
Os01g0833000 Oryza sativa ssp. japonica HOM05D007405 ORTHO05D009256 2.2e-14 85.1 71 53.5
FAN02G2814 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.2e-12 79.3 40 95.0
SMO367G0452 Selaginella moellendorffii HOM05D007405 ORTHO05D009256 3.0e-11 74.7 59 55.9
Actinidia06062 Actinidia chinensis HOM05D007405 ORTHO05D009256 8.2e-09 66.6 73 53.4
FAN02G2590 Fragaria x ananassa HOM05D007405 ORTHO05D009256 9.1e-08 63.2 28 100.0
Actinidia06059 Actinidia chinensis HOM05D007405 ORTHO05D009256 2.0e-07 62.0 47 68.1
Actinidia06778 Actinidia chinensis HOM05D002479 ORTHO05D002675 1.3e-06 59.3 94 30.9
Actinidia07832 Actinidia chinensis HOM05D002479 ORTHO05D002675 1.3e-06 59.3 94 30.9
PGR004G1668 Punica granatum HOM05D002479 ORTHO05D002675 1.3e-06 59.3 94 31.9
DCAR_005281 Daucus carota HOM05D002479 ORTHO05D002675 1.7e-06 58.9 90 32.2
HPP92_006127 Vanilla planifolia HOM05D002479 ORTHO05D002675 1.7e-06 58.9 90 31.1


User provided reference genes

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