Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G3265 Fragaria x ananassa HOM05D001672 ORTHO05D008029 6.4e-49 197.2 107 100.0
FAN14G4355 Fragaria x ananassa HOM05D001672 ORTHO05D008029 6.4e-49 197.2 107 100.0
RcHm_v2.0_Chr3g0447561 Rosa chinensis HOM05D001672 ORTHO05D008029 1.1e-32 143.3 117 76.9
Prupe.6G363800 Prunus persica HOM05D001672 ORTHO05D008029 3.3e-21 105.1 113 58.4
MD12G1263000 Malus domestica HOM05D001672 ORTHO05D008029 3.1e-19 98.6 112 54.5
MD04G1247400 Malus domestica HOM05D001672 ORTHO05D008029 2.9e-17 92.0 116 52.6
Cfa006240 Carpinus fangiana HOM05D001672 ORTHO05D008029 4.2e-16 88.2 108 55.6
GSVIVG01019055001 Vitis vinifera HOM05D001672 ORTHO05D008029 7.9e-15 84.0 77 62.3
Thecc.05G187200 Theobroma cacao HOM05D001672 ORTHO05D008029 3.3e-13 78.6 119 46.2
Manes.12G003100 Manihot esculenta HOM05D001672 ORTHO05D008029 7.4e-13 77.4 117 47.0
Duzib177G0269 Durio zibethinus HOM05D001672 ORTHO05D008029 3.7e-12 75.1 122 46.7
CANSAT54G0429 Cannabis sativa HOM05D001672 ORTHO05D008029 8.2e-12 73.9 116 47.4
QL01p048021 Quercus lobata HOM05D001672 ORTHO05D008029 1.8e-11 72.8 114 44.7
Duzib106G1257 Durio zibethinus HOM05D001672 ORTHO05D008029 9.0e-11 70.5 121 46.3
Lalb_Chr19g0127621 Lupinus albus HOM05D001672 ORTHO05D008029 1.2e-10 70.1 117 44.4
TWI36G0167 Tripterygium wilfordii HOM05D001672 ORTHO05D008029 1.2e-10 70.1 122 43.4
TWI36G0981 Tripterygium wilfordii HOM05D001672 ORTHO05D008029 1.2e-10 70.1 122 43.4
Lsat_1_v5_gn_8_2240 Lactuca sativa HOM05D001672 ORTHO05D008029 2.6e-10 68.9 63 60.3
Nn7g37576 Nelumbo nucifera HOM05D001672 ORTHO05D008029 2.6e-10 68.9 65 63.1
Solyc04g025290.4 Solanum lycopersicum HOM05D001672 ORTHO05D008029 4.5e-10 68.2 57 64.9
Sopen04g011940 Solanum pennellii HOM05D001672 ORTHO05D008029 4.5e-10 68.2 57 64.9
Gohir.D08G247600 Gossypium hirsutum HOM05D001672 ORTHO05D008029 5.8e-10 67.8 115 44.3
Atru.chr12.1702 Acer truncatum HOM05D001672 ORTHO05D008029 7.6e-10 67.4 110 45.5
Gohir.A08G227200 Gossypium hirsutum HOM05D001672 ORTHO05D008029 7.6e-10 67.4 117 43.6
AL7G45120 Arabidopsis lyrata HOM05D001672 ORTHO05D008029 1.0e-09 67.0 99 50.5
BcaB02g08040 Brassica carinata HOM05D001672 ORTHO05D008029 1.0e-09 67.0 82 51.2
Peaxi162Scf00619g00046 Petunia axillaris HOM05D001672 ORTHO05D008029 1.0e-09 67.0 55 67.3
Duzib150G1308 Durio zibethinus HOM05D001672 ORTHO05D008029 1.3e-09 66.6 115 45.2
FvH4_6g00190 Fragaria vesca HOM05D001672 ORTHO05D008029 1.3e-09 66.6 35 100.0
Gorai.004G264100 Gossypium raimondii HOM05D001672 ORTHO05D008029 1.3e-09 66.6 115 43.5
DCAR_030007 Daucus carota HOM05D001672 ORTHO05D008029 1.7e-09 66.2 102 43.1
Cc09_g03960 Coffea canephora HOM05D001672 ORTHO05D008029 2.2e-09 65.9 53 64.2
HanXRQChr05g0157031 Helianthus annuus HOM05D001672 ORTHO05D008029 2.2e-09 65.9 65 63.1
SGA_v2.0_scaffold122G33194 Striga asiatica HOM05D001672 ORTHO05D008029 2.2e-09 65.9 70 52.9
AT5G36170 Arabidopsis thaliana HOM05D001672 ORTHO05D008029 2.9e-09 65.5 65 55.4
AUR62006632 Chenopodium quinoa HOM05D001672 ORTHO05D008029 2.9e-09 65.5 65 60.0
Dinv21370 Davidia involucrata HOM05D001672 ORTHO05D008029 2.9e-09 65.5 62 58.1
Lj1g0017266 Lotus japonicus HOM05D001672 ORTHO05D008029 2.9e-09 65.5 116 41.4
Nitab4.5_0024954g0010 Nicotiana tabacum HOM05D001672 ORTHO05D008029 2.9e-09 65.5 90 50.0
Actinidia31345 Actinidia chinensis HOM05D001672 ORTHO05D008029 3.8e-09 65.1 67 55.2
BcaC08g44326 Brassica carinata HOM05D001672 ORTHO05D008029 3.8e-09 65.1 82 50.0
C06p17510 Brassica napus HOM05D001672 ORTHO05D008029 3.8e-09 65.1 82 50.0
BolC6t36945H Brassica oleracea HOM05D001672 ORTHO05D008029 3.8e-09 65.1 82 50.0
ECA233G5271 Erigeron canadensis HOM05D001672 ORTHO05D008029 3.8e-09 65.1 73 52.1
Nitab4.5_0001449g0040 Nicotiana tabacum HOM05D001672 ORTHO05D008029 3.8e-09 65.1 64 59.4
Rhsim09G0128900 Rhododendron simsii HOM05D001672 ORTHO05D008029 4.9e-09 64.7 112 49.1
vmacro10415 Vaccinium macrocarpon HOM05D001672 ORTHO05D008029 8.4e-09 63.9 67 55.2
FAN02G0822 Fragaria x ananassa HOM05D001672 ORTHO05D008029 1.4e-08 63.2 35 94.3
SalBow6G6011 Salvia bowleyana HOM05D001672 ORTHO05D008029 1.9e-08 62.8 103 43.7
Hund21839 Selenicereus undatus HOM05D001672 ORTHO05D008029 1.9e-08 62.8 110 46.4
Sabra08G0056400 Salix brachista HOM05D001672 ORTHO05D008029 2.5e-08 62.4 111 40.5
Glyma.09G248300 Glycine max HOM05D001672 ORTHO05D008029 3.2e-08 62.0 113 44.2
EL10Ac4g10010 Beta vulgaris HOM05D001672 ORTHO05D008029 4.2e-08 61.6 92 46.7
CAN.G4.22 Capsicum annuum HOM05D001672 ORTHO05D008029 4.2e-08 61.6 55 61.8
TPR.G32008 Trifolium pratense HOM05D001672 ORTHO05D008029 4.2e-08 61.6 62 56.5
FAN09G4699 Fragaria x ananassa HOM05D000399 ORTHO05D000304 7.1e-08 60.8 33 97.0
PSO832G2456 Papaver somniferum HOM05D001672 ORTHO05D008029 7.1e-08 60.8 67 55.2
Potri.008G075800 Populus trichocarpa HOM05D001672 ORTHO05D008029 7.1e-08 60.8 117 41.0
PGR031G1216 Punica granatum HOM05D001672 ORTHO05D008029 7.1e-08 60.8 116 42.2
Phvul.008G052200 Phaseolus vulgaris HOM05D001672 ORTHO05D008029 9.3e-08 60.5 114 43.0
Aa31LG9G17900 Aethionema arabicum HOM05D001672 ORTHO05D008029 1.2e-07 60.1 100 45.0
A05p16360 Brassica napus HOM05D001672 ORTHO05D008029 1.2e-07 60.1 99 46.5
BraA05t20544Z Brassica rapa HOM05D001672 ORTHO05D008029 1.2e-07 60.1 99 46.5
Carub.0007s3185 Capsella rubella HOM05D001672 ORTHO05D008029 2.7e-07 58.9 101 47.5
Ah.04g159150 Amaranthus hybridus HOM05D000399 ORTHO05D000304 3.5e-07 58.5 58 60.3
MSTRG.8200 Avicennia marina HOM05D001672 ORTHO05D008029 3.5e-07 58.5 114 39.5
AUR62000284 Chenopodium quinoa HOM05D001672 ORTHO05D008029 3.5e-07 58.5 55 60.0
Psat3g102320 Pisum sativum HOM05D001672 ORTHO05D008029 3.5e-07 58.5 115 42.6
VMungo1383G0488 Vigna mungo HOM05D001672 ORTHO05D008029 3.5e-07 58.5 114 42.1
Medtr7g080430 Medicago truncatula HOM05D001672 ORTHO05D008029 4.6e-07 58.2 69 49.3
THA.LOC104805706 Tarenaya hassleriana HOM05D001672 ORTHO05D008029 4.6e-07 58.2 111 40.5
Thhalv10004205m.g Eutrema salsugineum HOM05D001672 ORTHO05D008029 6.0e-07 57.8 66 48.5
Sp7g05990 Schrenkiella parvula HOM05D001672 ORTHO05D008029 6.0e-07 57.8 104 43.3
Eucgr.B01462 Eucalyptus grandis HOM05D001672 ORTHO05D008029 7.9e-07 57.4 105 45.7
PSO210G6757 Papaver somniferum HOM05D001672 ORTHO05D008029 1.0e-06 57.0 77 48.1
arahy.Tifrunner.gnm1.ann1.5A5R3G Arachis hypogaea HOM05D001672 ORTHO05D008029 1.3e-06 56.6 111 38.7
arahy.Tifrunner.gnm1.ann1.322B5E Arachis hypogaea HOM05D001672 ORTHO05D008029 3.9e-06 55.1 111 37.8


User provided reference genes

Program Settings