Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G2915 Fragaria x ananassa HOM05D005727 ORTHO05D007324 4.7e-132 474.6 241 100.0
FvH4_6g09890 Fragaria vesca HOM05D005727 ORTHO05D007324 8.8e-131 470.3 241 99.2
FAN05G4930 Fragaria x ananassa HOM05D005727 ORTHO05D007324 1.1e-128 463.4 241 97.5
FAN09G3145 Fragaria x ananassa HOM05D005727 ORTHO05D007324 4.5e-127 458.0 241 96.3
FAN05G2443 Fragaria x ananassa HOM05D005727 ORTHO05D007324 2.5e-125 452.2 259 90.7
FAN05G2146 Fragaria x ananassa HOM05D005727 ORTHO05D007324 2.7e-124 448.7 262 89.3
RcHm_v2.0_Chr3g0460491 Rosa chinensis HOM05D005727 ORTHO05D007324 2.7e-124 448.7 241 93.8
MD12G1188200 Malus domestica HOM05D005727 ORTHO05D007324 6.6e-110 401.0 240 85.0
Nn2g10300 Nelumbo nucifera HOM05D005727 ORTHO05D007324 4.6e-95 351.7 218 79.4
Atru.chr8.117 Acer truncatum HOM05D005727 ORTHO05D007324 5.0e-94 348.2 241 74.7
Prupe.6G293500 Prunus persica HOM05D005727 ORTHO05D007324 1.2e-92 343.6 241 76.8
Aqoxy4G02424 Aquilegia oxysepala HOM05D005727 ORTHO05D007324 2.1e-92 342.8 242 72.3
CiPaw.09G221300 Carya illinoinensis HOM05D005727 ORTHO05D007324 6.2e-92 341.3 245 73.1
TAR267G0001 Trochodendron aralioides HOM05D005727 ORTHO05D007324 6.2e-92 341.3 241 73.4
TAR636G3506 Trochodendron aralioides HOM05D005727 ORTHO05D007324 2.3e-91 339.3 241 73.0
Potri.016G136600 Populus trichocarpa HOM05D005727 ORTHO05D007324 4.0e-91 338.6 240 73.3
Cpa.g.sc86.59 Carica papaya HOM05D005727 ORTHO05D007324 5.2e-91 338.2 242 73.1
Sabra04G0153300 Salix brachista HOM05D005727 ORTHO05D007324 8.9e-91 337.4 240 72.5
Gohir.D09G215000 Gossypium hirsutum HOM05D005727 ORTHO05D007324 2.6e-90 335.9 241 71.8
Gorai.006G235400 Gossypium raimondii HOM05D005727 ORTHO05D007324 2.6e-90 335.9 241 71.8
Gohir.A09G213660 Gossypium hirsutum HOM05D005727 ORTHO05D007324 3.4e-90 335.5 241 71.8
Thecc.04G151700 Theobroma cacao HOM05D005727 ORTHO05D007324 5.8e-90 334.7 236 72.0
GSVIVG01030181001 Vitis vinifera HOM05D005727 ORTHO05D007324 4.9e-89 331.6 238 70.6
Ciclev10012658m.g Citrus clementina HOM05D005727 ORTHO05D007324 1.1e-88 330.5 241 71.8
Glyma.09G275000 Glycine max HOM05D005727 ORTHO05D007324 1.9e-88 329.7 225 74.7
QL07p032118 Quercus lobata HOM05D005727 ORTHO05D007324 1.9e-88 329.7 245 71.8
Cfa017035 Carpinus fangiana HOM05D005727 ORTHO05D007324 4.1e-88 328.6 244 70.5
Phvul.008G082900 Phaseolus vulgaris HOM05D005727 ORTHO05D007324 5.4e-88 328.2 241 72.2
Haze_21174 Corylus avellana HOM05D005727 ORTHO05D007324 1.2e-87 327.0 244 70.1
VMungo1383G0728 Vigna mungo HOM05D005727 ORTHO05D007324 1.2e-87 327.0 241 70.5
arahy.Tifrunner.gnm1.ann1.FBM6UZ Arachis hypogaea HOM05D005727 ORTHO05D007324 6.0e-87 324.7 242 69.4
Dinv16978 Davidia involucrata HOM05D005727 ORTHO05D007324 6.0e-87 324.7 220 73.2
Lalb_Chr01g0023751 Lupinus albus HOM05D005727 ORTHO05D007324 6.0e-87 324.7 238 72.7
Glyma.18G213900 Glycine max HOM05D005727 ORTHO05D007324 1.0e-86 323.9 243 70.4
Manes.08G171300 Manihot esculenta HOM05D005727 ORTHO05D007324 1.0e-86 323.9 244 69.3
CANSAT35G1579 Cannabis sativa HOM05D005727 ORTHO05D007324 6.6e-86 321.2 244 66.0
Lj1g0000237 Lotus japonicus HOM05D005727 ORTHO05D007324 2.5e-85 319.3 233 70.0
Hund19761 Selenicereus undatus HOM05D005727 ORTHO05D007324 5.6e-85 318.2 218 72.0
Cc06_g00400 Coffea canephora HOM05D005727 ORTHO05D007324 7.3e-85 317.8 238 69.3
PGR031G0696 Punica granatum HOM05D005727 ORTHO05D007324 7.3e-85 317.8 219 72.1
Thhalv10014581m.g Eutrema salsugineum HOM05D005727 ORTHO05D007324 9.5e-85 317.4 236 68.2
CSS0016709 Camellia sinensis var. sinensis HOM05D005727 ORTHO05D007324 1.2e-84 317.0 244 68.9
Psat3g118920 Pisum sativum HOM05D005727 ORTHO05D007324 2.1e-84 316.2 241 70.5
Lsat_1_v5_gn_5_152381 Lactuca sativa HOM05D005727 ORTHO05D007324 3.6e-84 315.5 241 68.9
Ah.15g090030 Amaranthus hybridus HOM05D005727 ORTHO05D007324 4.7e-84 315.1 232 69.0
CAN.G487.5 Capsicum annuum HOM05D005727 ORTHO05D007324 4.7e-84 315.1 233 70.0
HPP92_018087 Vanilla planifolia HOM05D005727 ORTHO05D007324 6.2e-84 314.7 240 68.8
AL3G19740 Arabidopsis lyrata HOM05D005727 ORTHO05D007324 1.8e-83 313.2 242 67.8
Migut.J00039 Erythranthe guttata HOM05D005727 ORTHO05D007324 2.3e-83 312.8 220 70.0
Sopen10g027500 Solanum pennellii HOM05D005727 ORTHO05D007324 2.3e-83 312.8 218 72.0
arahy.Tifrunner.gnm1.ann1.CT9SCB Arachis hypogaea HOM05D005727 ORTHO05D007324 3.1e-83 312.4 250 66.4
DCAR_023975 Daucus carota HOM05D005727 ORTHO05D007324 3.1e-83 312.4 218 72.0
HanXRQChr11g0345321 Helianthus annuus HOM05D005727 ORTHO05D007324 3.1e-83 312.4 231 69.3
PGSC0003DMG400031234 Solanum tuberosum HOM05D005727 ORTHO05D007324 3.1e-83 312.4 218 72.0
Actinidia20792 Actinidia chinensis HOM05D005727 ORTHO05D007324 4.0e-83 312.0 216 70.8
Carub.0003s0787 Capsella rubella HOM05D005727 ORTHO05D007324 5.2e-83 311.6 242 66.9
Medtr7g073250 Medicago truncatula HOM05D005727 ORTHO05D007324 5.2e-83 311.6 233 69.5
AT3G08740 Arabidopsis thaliana HOM05D005727 ORTHO05D007324 6.8e-83 311.2 242 67.8
Os11g0116400 Oryza sativa ssp. japonica HOM05D005727 ORTHO05D007324 6.8e-83 311.2 198 75.8
Os12g0115900 Oryza sativa ssp. japonica HOM05D005727 ORTHO05D007324 1.2e-82 310.5 198 75.3
TPR.G14131 Trifolium pratense HOM05D005727 ORTHO05D007324 1.5e-82 310.1 222 70.7
CARHR083040 Cardamine hirsuta HOM05D005727 ORTHO05D007324 2.0e-82 309.7 243 66.3
ECA248G0208 Erigeron canadensis HOM05D005727 ORTHO05D007324 2.0e-82 309.7 217 71.0
Sed0002775 Sechium edule HOM05D005727 ORTHO05D007324 2.0e-82 309.7 240 67.1
TWI53G1599 Tripterygium wilfordii HOM05D005727 ORTHO05D007324 2.0e-82 309.7 238 67.2
Sp3g07170 Schrenkiella parvula HOM05D005727 ORTHO05D007324 2.6e-82 309.3 242 67.8
Sc02g0000150 Simmondsia chinensis HOM05D005727 ORTHO05D007324 2.6e-82 309.3 238 67.2
Solyc10g075020.3 Solanum lycopersicum HOM05D005727 ORTHO05D007324 2.6e-82 309.3 241 67.6
THA.LOC104823320 Tarenaya hassleriana HOM05D005727 ORTHO05D007324 9.9e-82 307.4 240 67.5
ATR1127G235 Amborella trichopoda HOM05D005727 ORTHO05D007324 1.7e-81 306.6 190 77.4
CsaV3_3G033100 Cucumis sativus L. HOM05D005727 ORTHO05D007324 1.7e-81 306.6 228 68.4
MELO3C009104.2 Cucumis melo HOM05D005727 ORTHO05D007324 2.2e-81 306.2 233 68.2
CSS0006704 Camellia sinensis var. sinensis HOM05D005727 ORTHO05D007324 3.7e-81 305.4 216 71.8
BcaNung03307 Brassica carinata HOM05D005727 ORTHO05D007324 6.4e-81 304.7 243 66.3
BcaNung03303 Brassica carinata HOM05D005727 ORTHO05D007324 8.4e-81 304.3 193 75.1
A05p40060 Brassica napus HOM05D005727 ORTHO05D007324 8.4e-81 304.3 242 64.9
SalBow8G0913 Salvia bowleyana HOM05D005727 ORTHO05D007324 8.4e-81 304.3 218 70.6
Oeu057982.1 Olea europaea HOM05D005727 ORTHO05D007324 1.1e-80 303.9 220 71.4
BcaC05g29610 Brassica carinata HOM05D005727 ORTHO05D007324 1.9e-80 303.1 242 64.5
C05p59120 Brassica napus HOM05D005727 ORTHO05D007324 1.9e-80 303.1 242 64.5
PSO017G0584 Papaver somniferum HOM05D005727 ORTHO05D007324 1.9e-80 303.1 245 64.5
BcaC06g31951 Brassica carinata HOM05D005727 ORTHO05D007324 4.1e-80 302.0 190 75.3
BolC5t34584H Brassica oleracea HOM05D005727 ORTHO05D007324 4.1e-80 302.0 242 64.5
EL10Ac7g17100 Beta vulgaris HOM05D005727 ORTHO05D007324 5.4e-80 301.6 244 65.6
C09p74740 Brassica napus HOM05D005727 ORTHO05D007324 5.4e-80 301.6 190 75.3
AUR62006416 Chenopodium quinoa HOM05D005727 ORTHO05D007324 5.4e-80 301.6 241 64.7
Eucgr.A00739 Eucalyptus grandis HOM05D005727 ORTHO05D007324 1.2e-79 300.4 252 64.3
A10p33800 Brassica napus HOM05D005727 ORTHO05D007324 4.6e-79 298.5 190 74.7
BolC3t14633H Brassica oleracea HOM05D005727 ORTHO05D007324 4.6e-79 298.5 222 68.5
Nitab4.5_0010794g0010 Nicotiana tabacum HOM05D005727 ORTHO05D007324 7.8e-79 297.7 241 67.2
Thhalv10023841m.g Eutrema salsugineum HOM05D005727 ORTHO05D007324 1.0e-78 297.4 200 71.0
Sp6g41120 Schrenkiella parvula HOM05D005727 ORTHO05D007324 1.0e-78 297.4 244 63.5
PSO170G4055 Papaver somniferum HOM05D005727 ORTHO05D007324 1.7e-78 296.6 244 63.9
BraA10t45408Z Brassica rapa HOM05D005727 ORTHO05D007324 3.0e-78 295.8 190 73.7
Thhalv10022392m.g Eutrema salsugineum HOM05D005727 ORTHO05D007324 8.6e-78 294.3 200 70.0
SGA_v2.0_scaffold85G26613 Striga asiatica HOM05D005727 ORTHO05D007324 8.6e-78 294.3 220 68.2
Peaxi162Scf01238g00221 Petunia axillaris HOM05D005727 ORTHO05D007324 2.5e-77 292.7 265 60.0
HanXRQChr01g0000121 Helianthus annuus HOM05D005727 ORTHO05D007324 5.6e-77 291.6 219 66.2
AUR62029764 Chenopodium quinoa HOM05D005727 ORTHO05D007324 4.7e-76 288.5 256 60.2
Aa31LG5G18760 Aethionema arabicum HOM05D005727 ORTHO05D007324 1.1e-75 287.3 213 68.5
MSTRG.5500 Avicennia marina HOM05D005727 ORTHO05D007324 1.4e-75 287.0 220 64.1
SalBow1G7101 Salvia bowleyana HOM05D005727 ORTHO05D007324 1.4e-75 287.0 246 62.2
Actinidia32567 Actinidia chinensis HOM05D005727 ORTHO05D007324 4.4e-74 282.0 225 65.3
AagrBONN_evm.TU.Sc2ySwM_228.1047 Anthoceros agrestis HOM05D005727 ORTHO05D007324 7.6e-74 281.2 190 71.1
SalBow1G5580 Salvia bowleyana HOM05D005727 ORTHO05D007324 1.3e-73 280.4 201 69.7
Lj3A941T101 Lonicera japonica HOM05D005727 ORTHO05D007324 4.6e-71 271.9 217 65.0
Aa31LG5G11490 Aethionema arabicum HOM05D005727 ORTHO05D007324 1.3e-70 270.4 205 68.8
Pp3c23_18430 Physcomitrium patens HOM05D005727 ORTHO05D007324 1.3e-70 270.4 243 59.7
COL.COLO4_06480 Corchorus olitorius HOM05D005727 ORTHO05D007324 3.9e-70 268.9 222 64.0
BcaC01g05776 Brassica carinata HOM05D005727 ORTHO05D007324 1.1e-69 267.3 188 70.2
Duzib268G0979 Durio zibethinus HOM05D005727 ORTHO05D007324 1.9e-69 266.5 195 68.7
CBR_g46434 Chara braunii HOM05D005727 ORTHO05D007324 3.6e-68 262.3 190 63.2
SMO358G0605 Selaginella moellendorffii HOM05D005727 ORTHO05D007324 3.1e-67 259.2 185 63.2
vmacro08938 Vaccinium macrocarpon HOM05D005727 ORTHO05D007324 9.0e-67 257.7 289 50.9
SalBow5G2514 Salvia bowleyana HOM05D005727 ORTHO05D007324 2.9e-65 252.7 165 74.5
SGA_v2.0_scaffold85G26621 Striga asiatica HOM05D005727 ORTHO05D007324 4.9e-65 251.9 167 72.5
Rhsim04G0121700 Rhododendron simsii HOM05D005727 ORTHO05D007324 1.5e-61 240.4 346 42.2
unitig_578.g15912 Utricularia gibba HOM05D005727 ORTHO05D007324 1.3e-60 237.3 179 66.5
Mapoly0080s0087 Marchantia polymorpha HOM05D005727 ORTHO05D007324 2.8e-60 236.1 240 50.8
MD04G1174600 Malus domestica HOM05D005727 ORTHO05D007324 1.9e-56 223.4 142 76.1
MCO07G614 Micromonas commoda HOM05D005727 ORTHO05D007324 4.6e-55 218.8 184 54.9
Cre16.g691000 Chlamydomonas reinhardtii HOM05D005727 ORTHO05D007324 2.2e-49 199.9 184 52.7
CDE04G3002 Ceratophyllum demersum HOM05D005727 ORTHO05D007324 9.6e-45 184.5 135 71.9
SEGI_30349 Sequoiadendron giganteum HOM05D005727 ORTHO05D007324 1.1e-40 171.0 129 62.8
Sopen10g027490 Solanum pennellii HOM05D005727 ORTHO05D007324 1.3e-36 157.5 106 70.8
ClCG10G022720 Citrullus lanatus HOM05D005727 ORTHO05D007324 4.8e-36 155.6 106 68.9
Zm00001eb406060 Zea mays HOM05D005727 ORTHO05D007324 5.0e-25 119.0 78 73.1
PRCOL_00007056 Prasinoderma coloniale HOM05D005727 ORTHO05D007324 2.3e-22 110.2 168 38.1
Zm00001eb061520 Zea mays HOM05D007418 ORTHO05D009419 8.2e-20 101.7 203 30.0
Aqoxy1G00469 Aquilegia oxysepala HOM05D002514 ORTHO05D002761 1.8e-19 100.5 233 27.5
Nn7g35872 Nelumbo nucifera HOM05D007418 ORTHO05D009419 1.8e-19 100.5 239 26.8
Eucgr.J01769 Eucalyptus grandis HOM05D007418 ORTHO05D009419 5.9e-18 95.5 229 31.9
Pp3c1_29390 Physcomitrium patens HOM05D007418 ORTHO05D009419 5.9e-18 95.5 184 25.0
SMO172G0180 Selaginella moellendorffii HOM05D007418 ORTHO05D009419 2.2e-17 93.6 190 25.3
SalBow2G0815 Salvia bowleyana HOM05D007418 ORTHO05D009419 6.5e-17 92.0 205 30.7
Dinv13469 Davidia involucrata HOM05D007418 ORTHO05D009419 1.1e-16 91.3 232 28.0
PSO384G4713 Papaver somniferum HOM05D007418 ORTHO05D009419 1.1e-16 91.3 194 26.8
PSO339G6348 Papaver somniferum HOM05D007418 ORTHO05D009419 1.5e-16 90.9 194 26.8
CDE04G0740 Ceratophyllum demersum HOM05D005727 ORTHO05D007324 7.2e-16 88.6 64 67.2
MCO01G577 Micromonas commoda HOM05D005727 ORTHO05D009419 1.2e-15 87.8 185 25.4
AL7G26640 Arabidopsis lyrata HOM05D007418 ORTHO05D009419 1.6e-15 87.4 182 30.8
CARHR233880 Cardamine hirsuta HOM05D007418 ORTHO05D009419 2.1e-15 87.0 182 30.8
Ciclev10016443m.g Citrus clementina HOM05D007418 ORTHO05D009419 2.1e-15 87.0 203 28.6
AT4G26310 Arabidopsis thaliana HOM05D007418 ORTHO05D009419 2.7e-15 86.7 182 30.8
AagrBONN_evm.TU.Sc2ySwM_344.2531 Anthoceros agrestis HOM05D007418 ORTHO05D009419 3.6e-15 86.3 166 27.7
CBR_g28818 Chara braunii HOM05D007418 ORTHO05D009419 6.1e-15 85.5 189 27.0
PGR119G2313 Punica granatum HOM05D007418 ORTHO05D009419 4.0e-14 82.8 240 29.2
THA.LOC104817736 Tarenaya hassleriana HOM05D007418 ORTHO05D009419 4.0e-14 82.8 182 29.1
Aa31LG11G8030 Aethionema arabicum HOM05D007418 ORTHO05D009419 5.2e-14 82.4 180 26.7
Carub.0007s1463 Capsella rubella HOM05D007418 ORTHO05D009419 5.2e-14 82.4 226 28.3
Manes.05G202800 Manihot esculenta HOM05D007418 ORTHO05D009419 1.2e-13 81.3 237 28.7
COL.COLO4_22858 Corchorus olitorius HOM05D007418 ORTHO05D009419 2.6e-13 80.1 224 26.3
Gorai.009G114600 Gossypium raimondii HOM05D007418 ORTHO05D009419 5.7e-13 79.0 183 27.9
Potri.001G004300 Populus trichocarpa HOM05D007418 ORTHO05D009419 7.5e-13 78.6 198 26.8
Actinidia16244 Actinidia chinensis HOM05D007418 ORTHO05D009419 1.7e-12 77.4 236 25.0
Thhalv10021419m.g Eutrema salsugineum HOM05D007418 ORTHO05D009419 1.7e-12 77.4 182 27.5
QL01p009000 Quercus lobata HOM05D007418 ORTHO05D009419 1.7e-12 77.4 206 28.2
Duzib160G0534 Durio zibethinus HOM05D007418 ORTHO05D009419 3.7e-12 76.3 223 26.9
HPP92_000821 Vanilla planifolia HOM05D007418 ORTHO05D009419 3.7e-12 76.3 167 27.5
BolC5t33821H Brassica oleracea HOM05D007418 ORTHO05D009419 6.3e-12 75.5 182 26.9
BraA05t22194Z Brassica rapa HOM05D007418 ORTHO05D009419 6.3e-12 75.5 182 26.9
Sp3g14020 Schrenkiella parvula HOM05D007418 ORTHO05D009419 6.3e-12 75.5 180 25.0
Thecc.06G017000 Theobroma cacao HOM05D007418 ORTHO05D009419 2.4e-11 73.6 240 26.7
Gohir.A05G110100 Gossypium hirsutum HOM05D007418 ORTHO05D009419 4.1e-11 72.8 241 28.2
SEGI_29867 Sequoiadendron giganteum HOM05D005727 ORTHO05D007324 3.5e-10 69.7 38 78.9
Ciclev10010465m.g Citrus clementina HOM05D005727 ORTHO05D007324 1.7e-09 67.4 40 82.5
MD11G1003800 Malus domestica HOM05D007418 ORTHO05D009419 2.2e-09 67.0 244 26.2
Sabra01G0003000 Salix brachista HOM05D007418 ORTHO05D009419 3.2e-08 63.2 195 24.6
Hma1.2p1_0062F.1_g034220 Hydrangea macrophylla HOM05D007418 ORTHO05D009419 1.2e-07 61.2 137 27.7


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