Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN14G1294 Fragaria x ananassa HOM05D007352 ORTHO05D009389 3.5e-80 303.1 216 100.0
FAN05G3498 Fragaria x ananassa HOM05D001329 ORTHO05D002618 1.3e-47 194.9 162 98.8
FAN05G5710 Fragaria x ananassa HOM05D007352 ORTHO05D009389 2.0e-43 181.0 155 80.0
Ah.01g017290 Amaranthus hybridus HOM05D007352 ORTHO05D009389 1.8e-36 157.9 166 81.9
FvH4_6g32590 Fragaria vesca HOM05D007352 ORTHO05D009389 1.8e-31 141.4 68 100.0
FAN02G2393 Fragaria x ananassa HOM05D007352 ORTHO05D009389 1.8e-31 141.4 68 100.0
MD15G1412800 Malus domestica HOM05D007352 ORTHO05D009389 5.1e-31 139.8 155 66.5
CARHR042130 Cardamine hirsuta HOM05D007352 ORTHO05D009389 7.4e-30 136.0 169 42.0
VMungo0540G1340 Vigna mungo HOM05D007352 ORTHO05D009389 7.4e-30 136.0 155 74.2
RcHm_v2.0_Chr2g0141041 Rosa chinensis HOM05D007352 ORTHO05D009389 9.7e-30 135.6 68 92.6
THA.LOC104810542 Tarenaya hassleriana HOM05D007352 ORTHO05D009389 1.7e-26 124.8 166 58.4
Prupe.3G056800 Prunus persica HOM05D007352 ORTHO05D009389 7.2e-25 119.4 68 77.9
COL.COLO4_27631 Corchorus olitorius HOM05D007352 ORTHO05D009389 1.6e-24 118.2 68 76.5
Sc15g0001700 Simmondsia chinensis HOM05D007352 ORTHO05D009389 1.6e-24 118.2 68 77.9
Sopen03g039940 Solanum pennellii HOM05D007352 ORTHO05D009389 2.7e-24 117.5 66 80.3
TPR.G26324 Trifolium pratense HOM05D007352 ORTHO05D009389 2.7e-24 117.5 68 75.0
Solyc03g121110.3 Solanum lycopersicum HOM05D007352 ORTHO05D009389 4.6e-24 116.7 66 78.8
PGSC0003DMG400002522 Solanum tuberosum HOM05D007352 ORTHO05D009389 4.6e-24 116.7 66 78.8
Ca_00856_v3 Cicer arietinum L. HOM05D007352 ORTHO05D009389 6.1e-24 116.3 68 75.0
Gohir.D02G136200 Gossypium hirsutum HOM05D007352 ORTHO05D009389 6.1e-24 116.3 68 72.1
MELO3C012722.2 Cucumis melo HOM05D007352 ORTHO05D009389 7.9e-24 115.9 68 75.0
MD09G1200200 Malus domestica HOM05D007352 ORTHO05D009389 7.9e-24 115.9 68 77.9
Psat1g166520 Pisum sativum HOM05D007352 ORTHO05D009389 1.0e-23 115.5 68 73.5
CSS0004060 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 1.4e-23 115.2 68 73.5
Haze_15863 Corylus avellana HOM05D007352 ORTHO05D009389 1.4e-23 115.2 66 78.8
Migut.L00048 Erythranthe guttata HOM05D007352 ORTHO05D009389 1.4e-23 115.2 68 73.5
Rhsim08G0228600 Rhododendron simsii HOM05D007352 ORTHO05D009389 1.4e-23 115.2 68 75.0
CAN.G1143.23 Capsicum annuum HOM05D007352 ORTHO05D009389 1.8e-23 114.8 66 77.3
Actinidia32109 Actinidia chinensis HOM05D000647 ORTHO05D000485 2.3e-23 114.4 68 73.5
SHI11130 Sapria himalayana HOM05D007352 ORTHO05D009389 2.3e-23 114.4 167 65.3
Lj9A311T59 Lonicera japonica HOM05D007352 ORTHO05D009389 3.0e-23 114.0 65 75.4
Medtr2g030540 Medicago truncatula HOM05D007352 ORTHO05D009389 3.9e-23 113.6 68 72.1
Sed0016070 Sechium edule HOM05D007352 ORTHO05D009389 5.1e-23 113.2 68 73.5
EL10Ac9g21188 Beta vulgaris HOM05D007352 ORTHO05D009389 6.7e-23 112.8 67 77.6
Gohir.A03G111600 Gossypium hirsutum HOM05D007352 ORTHO05D009389 6.7e-23 112.8 68 70.6
Nitab4.5_0005085g0030 Nicotiana tabacum HOM05D007352 ORTHO05D009389 6.7e-23 112.8 66 77.3
CSS0040101 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 8.8e-23 112.5 67 73.1
Ah.16g103230 Amaranthus hybridus HOM05D007352 ORTHO05D009389 1.1e-22 112.1 68 72.1
HanXRQChr11g0348741 Helianthus annuus HOM05D007352 ORTHO05D009389 1.1e-22 112.1 67 74.6
CsaV3_7G026910 Cucumis sativus L. HOM05D007352 ORTHO05D009389 1.5e-22 111.7 65 75.4
Lj6g0022790 Lotus japonicus HOM05D007352 ORTHO05D009389 1.5e-22 111.7 67 73.1
Peaxi162Scf00038g01145 Petunia axillaris HOM05D007352 ORTHO05D009389 1.5e-22 111.7 64 78.1
Cpa.g.sc25.26 Carica papaya HOM05D007352 ORTHO05D009389 2.0e-22 111.3 67 76.1
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 2.0e-22 111.3 65 73.8
Nitab4.5_0004969g0060 Nicotiana tabacum HOM05D007352 ORTHO05D009389 2.0e-22 111.3 66 75.8
Dinv27397 Davidia involucrata HOM05D007352 ORTHO05D009389 2.5e-22 110.9 67 74.6
Glyma.15G131800 Glycine max HOM05D007352 ORTHO05D009389 2.5e-22 110.9 68 69.1
AUR62022237 Chenopodium quinoa HOM05D007352 ORTHO05D009389 3.3e-22 110.5 66 74.2
Duzib251G0222 Durio zibethinus HOM05D007352 ORTHO05D009389 3.3e-22 110.5 64 73.4
Eucgr.F03084 Eucalyptus grandis HOM05D007352 ORTHO05D009389 3.3e-22 110.5 68 73.5
Gorai.005G152200 Gossypium raimondii HOM05D007352 ORTHO05D009389 3.3e-22 110.5 66 69.7
Lsat_1_v5_gn_4_98021 Lactuca sativa HOM05D007352 ORTHO05D009389 3.3e-22 110.5 64 76.6
Aqoxy7G01368 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 4.3e-22 110.2 60 85.0
AUR62031951 Chenopodium quinoa HOM05D007352 ORTHO05D009389 4.3e-22 110.2 65 76.9
Hma1.2p1_0430F.1_g151250 Hydrangea macrophylla HOM05D007352 ORTHO05D009389 4.3e-22 110.2 64 76.6
Lalb_Chr20g0120141 Lupinus albus HOM05D007352 ORTHO05D009389 4.3e-22 110.2 68 69.1
Hund07627 Selenicereus undatus HOM05D007352 ORTHO05D009389 4.3e-22 110.2 67 74.6
CiPaw.02G144900 Carya illinoinensis HOM05D007352 ORTHO05D009389 5.7e-22 109.8 63 77.8
Nn2g12740 Nelumbo nucifera HOM05D007352 ORTHO05D009389 5.7e-22 109.8 67 73.1
MBI04_g06993_MAGBIO Magnolia biondii HOM05D007352 ORTHO05D009389 7.4e-22 109.4 63 77.8
arahy.Tifrunner.gnm1.ann1.Y4G0P0 Arachis hypogaea HOM05D007352 ORTHO05D009389 9.7e-22 109.0 65 69.2
Ciclev10025103m.g Citrus clementina HOM05D007352 ORTHO05D009389 9.7e-22 109.0 64 75.0
arahy.Tifrunner.gnm1.ann1.X8VU69 Arachis hypogaea HOM05D007352 ORTHO05D009389 1.3e-21 108.6 67 67.2
Thecc.02G309100 Theobroma cacao HOM05D007352 ORTHO05D009389 2.2e-21 107.8 61 77.0
AL1G60010 Arabidopsis lyrata HOM05D007352 ORTHO05D009389 2.8e-21 107.5 68 72.1
Phvul.006G126800 Phaseolus vulgaris HOM05D007352 ORTHO05D009389 2.8e-21 107.5 68 69.1
QL05p019112 Quercus lobata HOM05D007352 ORTHO05D009389 2.8e-21 107.5 66 74.2
SGA_v2.0_scaffold265G46057 Striga asiatica HOM05D007352 ORTHO05D009389 2.8e-21 107.5 68 69.1
AT1G51965 Arabidopsis thaliana HOM05D007352 ORTHO05D009389 3.7e-21 107.1 68 72.1
CANSAT35G0590 Cannabis sativa HOM05D007352 ORTHO05D009389 3.7e-21 107.1 66 72.7
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 3.7e-21 107.1 68 70.6
vmacro18843 Vaccinium macrocarpon HOM05D007352 ORTHO05D009389 3.7e-21 107.1 68 70.6
TAR636G0386 Trochodendron aralioides HOM05D007352 ORTHO05D009389 4.8e-21 106.7 64 71.9
TAR636G1169 Trochodendron aralioides HOM05D007352 ORTHO05D009389 4.8e-21 106.7 64 71.9
Atru.BG.161.p Acer truncatum HOM05D007352 ORTHO05D009389 6.3e-21 106.3 65 72.3
SalBow1G5626 Salvia bowleyana HOM05D007352 ORTHO05D009389 8.2e-21 105.9 66 69.7
BcaB02g11032 Brassica carinata HOM05D007352 ORTHO05D009389 1.1e-20 105.5 68 70.6
A05p19210 Brassica napus HOM05D007352 ORTHO05D009389 1.1e-20 105.5 68 70.6
BraA05t20827Z Brassica rapa HOM05D007352 ORTHO05D009389 1.1e-20 105.5 68 70.6
Carub.0001s4090 Capsella rubella HOM05D007352 ORTHO05D009389 1.1e-20 105.5 68 70.6
Thhalv10011294m.g Eutrema salsugineum HOM05D007352 ORTHO05D009389 1.1e-20 105.5 68 70.6
Cfa003634 Carpinus fangiana HOM05D007352 ORTHO05D009389 2.4e-20 104.4 61 77.0
Cc06_g12800 Coffea canephora HOM05D007352 ORTHO05D009389 2.4e-20 104.4 61 72.1
Sp1g38610 Schrenkiella parvula HOM05D007352 ORTHO05D009389 2.4e-20 104.4 68 69.1
Aa31LG10G2840 Aethionema arabicum HOM05D007352 ORTHO05D009389 3.1e-20 104.0 68 67.6
CDE05G2407 Ceratophyllum demersum HOM05D007352 ORTHO05D009389 3.1e-20 104.0 66 69.7
BcaC08g43959 Brassica carinata HOM05D007352 ORTHO05D009389 5.3e-20 103.2 68 70.6
C06p13600 Brassica napus HOM05D007352 ORTHO05D009389 5.3e-20 103.2 68 70.6
BolC6t36524H Brassica oleracea HOM05D007352 ORTHO05D009389 5.3e-20 103.2 68 70.6
PSO832G0057 Papaver somniferum HOM05D007352 ORTHO05D009389 6.9e-20 102.8 64 75.0
Potri.013G105000 Populus trichocarpa HOM05D007352 ORTHO05D009389 5.0e-18 96.7 61 70.5
Sabra13G0090700 Salix brachista HOM05D007352 ORTHO05D009389 5.0e-18 96.7 61 70.5
GSVIVG01016956001 Vitis vinifera HOM05D007352 ORTHO05D009389 5.0e-18 96.7 54 79.6
Manes.11G031901 Manihot esculenta HOM05D007352 ORTHO05D009389 6.5e-18 96.3 63 65.1
HPP92_000532 Vanilla planifolia HOM05D007352 ORTHO05D009389 3.2e-17 94.0 67 65.7
Os02g0226900 Oryza sativa ssp. japonica HOM05D007352 ORTHO05D009389 7.9e-16 89.4 68 54.4
FAN09G1056 Fragaria x ananassa HOM05D007352 ORTHO05D009389 4.4e-14 83.6 41 95.1
ATR0751G068 Amborella trichopoda HOM05D007352 ORTHO05D009389 1.3e-13 82.0 59 59.3
Zm00001eb205030 Zea mays HOM05D007352 ORTHO05D009389 1.5e-11 75.1 67 47.8
SEGI_18978 Sequoiadendron giganteum HOM05D007352 ORTHO05D009389 4.5e-11 73.6 66 51.5
SGA_v2.0_scaffold115G32057 Striga asiatica HOM05D007352 ORTHO05D009389 8.0e-08 62.8 63 47.6


User provided reference genes

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