Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G2898 Fragaria x ananassa HOM05D007098 ORTHO05D008793 2.1e-236 822.8 712 100.0
FAN18G2243 Fragaria x ananassa HOM05D007098 ORTHO05D008793 1.1e-210 737.3 716 94.3
FvH4_5g07010 Fragaria vesca HOM05D007098 ORTHO05D008793 7.4e-210 734.6 716 94.3
FAN04G0983 Fragaria x ananassa HOM05D007098 ORTHO05D008793 5.3e-200 701.8 718 82.9
RcHm_v2.0_Chr7g0191671 Rosa chinensis HOM05D007098 ORTHO05D008793 7.9e-196 688.0 717 91.4
MD06G1160200 Malus domestica HOM05D007098 ORTHO05D008793 5.9e-167 592.0 720 83.1
Prupe.5G160200 Prunus persica HOM05D007098 ORTHO05D008793 4.4e-154 549.3 731 78.9
Manes.06G113500 Manihot esculenta HOM05D007098 ORTHO05D008793 7.5e-138 495.4 716 73.5
Haze_07291 Corylus avellana HOM05D007098 ORTHO05D008793 3.2e-136 490.0 725 77.9
ClCG03G003340 Citrullus lanatus HOM05D007098 ORTHO05D008793 5.4e-136 489.2 673 80.8
QL10p005624 Quercus lobata HOM05D007098 ORTHO05D008793 2.1e-135 487.3 680 80.9
Thecc.03G120500 Theobroma cacao HOM05D007098 ORTHO05D008793 4.3e-133 479.6 718 75.3
Hma1.2p1_0014F.1_g009950 Hydrangea macrophylla HOM05D007098 ORTHO05D008793 4.0e-131 473.0 677 80.9
Dinv11119 Davidia involucrata HOM05D002040 ORTHO05D002502 1.2e-130 471.5 720 74.4
Cpa.g.sc4.42 Carica papaya HOM05D007098 ORTHO05D008793 1.9e-128 464.2 687 76.9
Ah.08g218330 Amaranthus hybridus HOM05D007098 ORTHO05D008793 1.2e-127 461.5 717 75.9
EL10Ac7g18049 Beta vulgaris HOM05D007098 ORTHO05D008793 2.1e-127 460.7 688 77.0
CiPaw.11G013600 Carya illinoinensis HOM05D007098 ORTHO05D008793 4.6e-127 459.5 624 83.3
Gorai.001G062100 Gossypium raimondii HOM05D007098 ORTHO05D008793 6.0e-127 459.1 710 74.5
Gohir.A07G054300 Gossypium hirsutum HOM05D007098 ORTHO05D008793 1.7e-126 457.6 708 74.6
Gohir.D07G058600 Gossypium hirsutum HOM05D007098 ORTHO05D008793 2.3e-126 457.2 710 74.2
CsaV3_1G009150 Cucumis sativus L. HOM05D007098 ORTHO05D008793 5.1e-126 456.1 630 78.4
Sed0010608 Sechium edule HOM05D007098 ORTHO05D008793 1.5e-125 454.5 676 78.7
TWI39G0887 Tripterygium wilfordii HOM05D007098 ORTHO05D008793 1.2e-124 451.4 700 76.1
Sabra12G0066500 Salix brachista HOM05D007098 ORTHO05D008793 6.9e-123 445.7 712 74.9
Potri.012G091800 Populus trichocarpa HOM05D007098 ORTHO05D008793 5.8e-122 442.6 723 74.0
MELO3C002322.2 Cucumis melo HOM05D007098 ORTHO05D008793 1.3e-121 441.4 715 73.3
Atru.chr9.986 Acer truncatum HOM05D007098 ORTHO05D008793 1.4e-120 438.0 716 75.1
CANSAT80G2237 Cannabis sativa HOM05D007098 ORTHO05D008793 4.2e-120 436.4 724 75.6
Nn5g28372 Nelumbo nucifera HOM05D007098 ORTHO05D008793 1.6e-119 434.5 673 76.8
Glyma.11G111200 Glycine max HOM05D007098 ORTHO05D008793 1.0e-118 431.8 692 73.6
Ciclev10019054m.g Citrus clementina HOM05D007098 ORTHO05D008793 9.6e-117 425.2 700 74.9
Lj2g0008135 Lotus japonicus HOM05D007098 ORTHO05D008793 2.8e-116 423.7 677 75.3
Glyma.12G037500 Glycine max HOM05D007098 ORTHO05D008793 3.6e-116 423.3 649 76.4
Duzib205G2031 Durio zibethinus HOM05D007098 ORTHO05D008793 5.3e-115 419.5 693 73.7
TAR371G0113 Trochodendron aralioides HOM05D007098 ORTHO05D008793 1.2e-114 418.3 670 76.4
GSVIVG01007576001 Vitis vinifera HOM05D007098 ORTHO05D008793 9.9e-114 415.2 681 76.8
Cc04_g10690 Coffea canephora HOM05D007098 ORTHO05D008793 2.9e-113 413.7 716 71.6
Cfa018906 Carpinus fangiana HOM05D007098 ORTHO05D008793 4.9e-113 412.9 556 87.2
AUR62001258 Chenopodium quinoa HOM05D007098 ORTHO05D008793 1.1e-112 411.8 622 79.4
THA.LOC104824999 Tarenaya hassleriana HOM05D007098 ORTHO05D008793 1.1e-112 411.8 718 68.2
AUR62025750 Chenopodium quinoa HOM05D007098 ORTHO05D008793 2.1e-111 407.5 619 79.0
Phvul.011G039200 Phaseolus vulgaris HOM05D007098 ORTHO05D008793 2.1e-111 407.5 677 73.4
MSTRG.9703 Avicennia marina HOM05D007098 ORTHO05D008793 4.6e-111 406.4 670 73.4
HanXRQChr09g0272771 Helianthus annuus HOM05D007098 ORTHO05D008793 7.9e-111 405.6 719 68.4
arahy.Tifrunner.gnm1.ann1.RHK9HC Arachis hypogaea HOM05D007098 ORTHO05D008793 1.5e-109 401.4 708 70.9
PGSC0003DMG400015232 Solanum tuberosum HOM05D007098 ORTHO05D008793 1.9e-109 401.0 676 74.3
Actinidia16202 Actinidia chinensis HOM05D007098 ORTHO05D008793 2.5e-109 400.6 708 70.2
Lalb_Chr10g0098821 Lupinus albus HOM05D007098 ORTHO05D008793 7.4e-109 399.1 634 76.7
arahy.Tifrunner.gnm1.ann1.PW5CDL Arachis hypogaea HOM05D007098 ORTHO05D008793 1.3e-108 398.3 709 71.1
Carub.0008s1032 Capsella rubella HOM05D007098 ORTHO05D008793 6.2e-108 396.0 623 77.5
Rhsim08G0182900 Rhododendron simsii HOM05D007098 ORTHO05D008793 1.4e-107 394.8 561 84.0
Aa31LG3G5960 Aethionema arabicum HOM05D007098 ORTHO05D008793 1.5e-106 391.3 622 77.0
AL8G24320 Arabidopsis lyrata HOM05D007098 ORTHO05D008793 2.6e-106 390.6 722 69.3
CSS0030055 Camellia sinensis var. sinensis HOM05D007098 ORTHO05D008793 2.6e-106 390.6 508 69.5
MBI11_g46348_MAGBIO Magnolia biondii HOM05D007098 ORTHO05D008793 2.6e-106 390.6 621 78.9
AT5G50280 Arabidopsis thaliana HOM05D007098 ORTHO05D008793 5.8e-106 389.4 704 70.6
vmacro19257 Vaccinium macrocarpon HOM05D007098 ORTHO05D008793 3.8e-105 386.7 580 80.9
CSS0038177 Camellia sinensis var. sinensis HOM05D007098 ORTHO05D008793 6.4e-105 386.0 608 77.6
Thhalv10012796m.g Eutrema salsugineum HOM05D007098 ORTHO05D008793 1.9e-104 384.4 628 76.3
CARHR258300 Cardamine hirsuta HOM05D007098 ORTHO05D008793 4.2e-104 383.3 657 72.5
Peaxi162Scf00089g00927 Petunia axillaris HOM05D007098 ORTHO05D008793 5.5e-104 382.9 622 77.7
Dinv38489 Davidia involucrata HOM05D007098 ORTHO05D008793 1.3e-102 378.3 421 76.7
Sp6g12370 Schrenkiella parvula HOM05D007098 ORTHO05D008793 3.0e-102 377.1 621 75.4
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 2.5e-101 374.0 717 65.7
BolC3t15668H Brassica oleracea HOM05D007098 ORTHO05D008793 3.3e-101 373.6 619 70.8
Nitab4.5_0001360g0150 Nicotiana tabacum HOM05D007098 ORTHO05D008793 7.4e-101 372.5 674 74.8
BcaC01g04822 Brassica carinata HOM05D007098 ORTHO05D008793 9.6e-101 372.1 618 71.2
A03p27750 Brassica napus HOM05D007098 ORTHO05D008793 1.3e-100 371.7 617 71.0
BraA03t11986Z Brassica rapa HOM05D007098 ORTHO05D008793 6.2e-100 369.4 619 70.6
Sopen03g030770 Solanum pennellii HOM05D007098 ORTHO05D008793 6.2e-100 369.4 671 72.9
BcaB01g02904 Brassica carinata HOM05D007098 ORTHO05D008793 8.2e-100 369.0 619 70.8
Psat2g130240 Pisum sativum HOM05D007098 ORTHO05D008793 3.1e-99 367.1 626 75.9
C03p33470 Brassica napus HOM05D007098 ORTHO05D008793 1.2e-98 365.2 618 70.7
Nitab4.5_0006717g0020 Nicotiana tabacum HOM05D007098 ORTHO05D008793 4.5e-98 363.2 665 72.9
PSO063G4104 Papaver somniferum HOM05D007098 ORTHO05D008793 7.6e-98 362.5 666 72.5
PSO782G3618 Papaver somniferum HOM05D007098 ORTHO05D008793 7.6e-98 362.5 669 72.6
Medtr5g045490 Medicago truncatula HOM05D007098 ORTHO05D008793 1.3e-97 361.7 669 71.9
Sc22g0003940 Simmondsia chinensis HOM05D007098 ORTHO05D008793 1.3e-97 361.7 668 72.6
TPR.G24468 Trifolium pratense HOM05D007098 ORTHO05D008793 3.8e-97 360.1 620 75.2
Glyma.02G116500 Glycine max HOM05D007098 ORTHO05D008793 4.9e-97 359.8 627 74.6
SalBow1G0423 Salvia bowleyana HOM05D007098 ORTHO05D008793 1.4e-96 358.2 672 64.7
Migut.D02039 Erythranthe guttata HOM05D007098 ORTHO05D008793 3.2e-96 357.1 653 72.4
VMungo1127G2011 Vigna mungo HOM05D007098 ORTHO05D008793 3.9e-94 350.1 682 70.7
Solyc03g111650.4 Solanum lycopersicum HOM05D007098 ORTHO05D008793 3.3e-93 347.1 671 56.8
Lsat_1_v5_gn_4_78280 Lactuca sativa HOM05D007098 ORTHO05D008793 5.3e-91 339.7 685 66.3
arahy.Tifrunner.gnm1.ann1.L7HRZC Arachis hypogaea HOM05D007098 ORTHO05D008793 2.6e-90 337.4 361 52.1
CDE09G0597 Ceratophyllum demersum HOM05D007098 ORTHO05D008793 5.0e-89 333.2 311 57.2
Phvul.003G042600 Phaseolus vulgaris HOM05D007098 ORTHO05D008793 3.2e-88 330.5 696 68.5
Hund21512 Selenicereus undatus HOM05D007098 ORTHO05D008793 2.0e-85 321.2 270 57.8
Eucgr.B00165 Eucalyptus grandis HOM05D007098 ORTHO05D008793 2.5e-85 320.9 500 86.6
VMungo1215G0824 Vigna mungo HOM05D007098 ORTHO05D008793 2.5e-85 320.9 333 53.2
ECA232G2468 Erigeron canadensis HOM05D001195 ORTHO05D001138 1.7e-84 318.2 580 70.7
Lj5A101T108 Lonicera japonica HOM05D007098 ORTHO05D008793 2.6e-82 310.8 219 66.7
Ca_04973_v3 Cicer arietinum L. HOM05D007098 ORTHO05D008793 2.1e-79 301.2 400 71.0
ATR0824G168 Amborella trichopoda HOM05D007098 ORTHO05D008793 2.7e-79 300.8 636 70.3
CAN.G472.49 Capsicum annuum HOM05D007098 ORTHO05D008793 8.3e-60 236.1 486 81.9
HPP92_024236 Vanilla planifolia HOM05D007098 ORTHO05D008793 3.8e-57 227.3 506 77.3
Glyma.01G059100 Glycine max HOM05D007098 ORTHO05D008793 7.2e-56 223.0 511 77.9
SEGI_05165 Sequoiadendron giganteum HOM05D007098 ORTHO05D008793 7.5e-53 213.0 195 52.3
Os05g0294600 Oryza sativa ssp. japonica HOM05D007098 ORTHO05D008793 5.9e-50 203.4 527 69.8
Ca_26530_v3 Cicer arietinum L. HOM05D005706 ORTHO05D008793 6.8e-38 163.3 237 86.9
Cpa.g.sc4.27 Carica papaya HOM05D006000 ORTHO05D008793 2.6e-37 161.4 122 64.8
Ca_30971_v3 Cicer arietinum L. HOM05D007098 ORTHO05D008793 4.0e-30 137.5 176 46.6
Mapoly0023s0082 Marchantia polymorpha HOM05D007098 ORTHO05D008793 5.4e-27 127.1 211 32.7
DCAR_021600 Daucus carota HOM05D007098 ORTHO05D008793 1.2e-26 125.9 76 84.2
Lj5C101T15 Lonicera japonica HOM05D007098 ORTHO05D008793 1.3e-25 122.5 75 81.3
AagrBONN_evm.TU.Sc2ySwM_228.5130 Anthoceros agrestis HOM05D007098 ORTHO05D008793 4.7e-23 114.0 203 30.5
Duzib084G0201 Durio zibethinus HOM05D007098 ORTHO05D008793 4.7e-23 114.0 75 77.3
Hma1.2p1_0014F.1_g009960 Hydrangea macrophylla HOM05D007098 ORTHO05D008793 1.2e-21 109.4 68 86.8
MBI11_g46065_MAGBIO Magnolia biondii HOM05D007098 ORTHO05D008793 1.5e-21 109.0 75 74.7
Zm00001eb154110 Zea mays HOM05D007098 ORTHO05D008793 4.6e-18 97.4 76 67.1
ClCG03G003360 Citrullus lanatus HOM05D007098 ORTHO05D008793 9.3e-11 73.2 64 60.9
arahy.Tifrunner.gnm1.ann1.0Z4KK5 Arachis hypogaea HOM05D007098 ORTHO05D008793 4.6e-10 70.9 55 63.6
PGR083G1300 Punica granatum HOM05D005390 ORTHO05D007086 6.6e-09 67.0 117 39.3
Aa31LG8G16030 Aethionema arabicum HOM05D003056 ORTHO05D003422 1.5e-08 65.9 160 25.6
Hund00615 Selenicereus undatus HOM05D006749 ORTHO05D008352 1.1e-06 59.7 111 28.8
Sc10g0007430 Simmondsia chinensis HOM05D006749 ORTHO05D008352 1.4e-06 59.3 123 31.7
Rhsim12G0197800 Rhododendron simsii HOM05D006749 ORTHO05D008352 2.4e-06 58.5 119 29.4
Prupe.3G071400 Prunus persica HOM05D006749 ORTHO05D008352 5.3e-06 57.4 119 31.9
Migut.I00863 Erythranthe guttata HOM05D006749 ORTHO05D008352 9.0e-06 56.6 133 30.1


User provided reference genes

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