Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN13G1241 Fragaria x ananassa HOM05D004012 ORTHO05D004752 5.6e-206 720.7 359 100.0
FAN18G2241 Fragaria x ananassa HOM05D004012 ORTHO05D004752 1.2e-187 659.8 337 98.2
FvH4_5g20280 Fragaria vesca HOM05D004012 ORTHO05D004752 2.0e-187 659.1 337 98.2
FAN04G0350 Fragaria x ananassa HOM05D004012 ORTHO05D004752 4.6e-184 647.9 337 96.7
FAN08G1522 Fragaria x ananassa HOM05D004012 ORTHO05D004752 8.7e-183 643.7 338 96.4
RcHm_v2.0_Chr7g0205341 Rosa chinensis HOM05D004012 ORTHO05D004752 1.3e-175 619.8 337 92.0
Prupe.5G058000 Prunus persica HOM05D004012 ORTHO05D004752 1.3e-167 593.2 337 87.2
MD04G1052500 Malus domestica HOM05D004012 ORTHO05D004752 9.3e-161 570.5 330 85.2
MD06G1047700 Malus domestica HOM05D004012 ORTHO05D004752 1.3e-157 560.1 331 83.4
CANSAT54G0087 Cannabis sativa HOM05D004012 ORTHO05D004752 7.4e-134 481.1 339 71.7
CiPaw.15G186100 Carya illinoinensis HOM05D004012 ORTHO05D004752 3.1e-132 475.7 332 72.0
Manes.13G154600 Manihot esculenta HOM05D004012 ORTHO05D004752 1.6e-128 463.4 331 69.5
Hma1.2p1_3052F.1_g332140 Hydrangea macrophylla HOM05D004012 ORTHO05D004752 3.6e-128 462.2 332 68.7
Hma1.2p1_0513F.1_g169610 Hydrangea macrophylla HOM05D004012 ORTHO05D004752 1.4e-127 460.3 332 68.7
Dinv19127 Davidia involucrata HOM05D004012 ORTHO05D004752 3.0e-127 459.1 334 69.2
Potri.017G122600 Populus trichocarpa HOM05D004012 ORTHO05D004752 1.1e-126 457.2 331 69.2
Lj6g0017875 Lotus japonicus HOM05D004012 ORTHO05D004752 9.7e-126 454.1 331 67.4
Ciclev10005092m.g Citrus clementina HOM05D004012 ORTHO05D004752 2.2e-125 453.0 331 67.7
Glyma.10G003500 Glycine max HOM05D004012 ORTHO05D004752 3.7e-125 452.2 331 68.0
Atru.chr3.1437 Acer truncatum HOM05D004012 ORTHO05D004752 8.2e-125 451.1 331 69.2
Glyma.02G005000 Glycine max HOM05D004012 ORTHO05D004752 2.4e-124 449.5 331 67.7
VMungo0720G3057 Vigna mungo HOM05D004012 ORTHO05D004752 2.4e-124 449.5 331 66.8
Lalb_Chr01g0020921 Lupinus albus HOM05D004012 ORTHO05D004752 7.7e-123 444.5 331 66.5
Phvul.007G277800 Phaseolus vulgaris HOM05D004012 ORTHO05D004752 1.7e-122 443.4 331 65.9
Dinv26833 Davidia involucrata HOM05D004012 ORTHO05D004752 2.9e-122 442.6 338 66.3
Lalb_Chr03g0037441 Lupinus albus HOM05D004012 ORTHO05D004752 5.0e-122 441.8 331 66.5
Sabra04G0062100 Salix brachista HOM05D004012 ORTHO05D004752 1.9e-121 439.9 356 63.8
Lalb_Chr19g0127941 Lupinus albus HOM05D004012 ORTHO05D004752 3.2e-121 439.1 331 66.5
Potri.004G092400 Populus trichocarpa HOM05D004012 ORTHO05D004752 5.5e-121 438.3 333 67.3
Nn5g27391 Nelumbo nucifera HOM05D004012 ORTHO05D004752 6.1e-120 434.9 332 65.4
Thecc.01G145600 Theobroma cacao HOM05D004012 ORTHO05D004752 6.1e-120 434.9 334 66.8
Gohir.D10G106700 Gossypium hirsutum HOM05D004012 ORTHO05D004752 8.0e-120 434.5 335 65.7
Gorai.011G116800 Gossypium raimondii HOM05D004012 ORTHO05D004752 8.0e-120 434.5 335 65.7
Sc16g0009950 Simmondsia chinensis HOM05D004012 ORTHO05D004752 8.0e-120 434.5 331 64.0
Gohir.A10G084900 Gossypium hirsutum HOM05D004012 ORTHO05D004752 1.8e-119 433.3 335 65.7
MSTRG.9397 Avicennia marina HOM05D004012 ORTHO05D004752 2.3e-119 433.0 334 66.8
TAR628G1247 Trochodendron aralioides HOM05D004012 ORTHO05D004752 3.0e-119 432.6 362 61.3
Hund07194 Selenicereus undatus HOM05D004012 ORTHO05D004752 4.0e-119 432.2 331 64.4
SalBow1G0131 Salvia bowleyana HOM05D004012 ORTHO05D004752 5.2e-119 431.8 334 66.2
Sopen04g017040 Solanum pennellii HOM05D004012 ORTHO05D004752 6.7e-119 431.4 332 66.6
MSTRG.4671 Avicennia marina HOM05D004012 ORTHO05D004752 2.0e-118 429.9 340 64.7
CSS0025733 Camellia sinensis var. sinensis HOM05D004012 ORTHO05D004752 2.6e-118 429.5 329 65.7
AUR62000581 Chenopodium quinoa HOM05D004012 ORTHO05D004752 2.6e-118 429.5 331 65.0
CAN.G10.8 Capsicum annuum HOM05D004012 ORTHO05D004752 7.5e-118 427.9 332 66.6
PGR119G2008 Punica granatum HOM05D004012 ORTHO05D004752 1.7e-117 426.8 328 63.7
Rhsim01G0147700 Rhododendron simsii HOM05D004012 ORTHO05D004752 3.7e-117 425.6 357 61.3
Aqoxy5G01862 Aquilegia oxysepala HOM05D004012 ORTHO05D004752 4.8e-117 425.2 332 63.3
Migut.D01135 Erythranthe guttata HOM05D004012 ORTHO05D004752 4.8e-117 425.2 334 64.4
MELO3C023211.2 Cucumis melo HOM05D004012 ORTHO05D004752 6.3e-117 424.9 335 63.3
AUR62006937 Chenopodium quinoa HOM05D004012 ORTHO05D004752 1.1e-116 424.1 331 64.0
TWI31G0701 Tripterygium wilfordii HOM05D004012 ORTHO05D004752 1.1e-116 424.1 332 64.8
Ca_12160_v3 Cicer arietinum L. HOM05D004012 ORTHO05D004752 1.4e-116 423.7 331 62.5
SGA_v2.0_scaffold14G07064 Striga asiatica HOM05D004012 ORTHO05D004752 2.4e-116 422.9 334 64.4
ClCG02G000230 Citrullus lanatus HOM05D004012 ORTHO05D004752 9.1e-116 421.0 347 61.7
Eucgr.I00085 Eucalyptus grandis HOM05D004012 ORTHO05D004752 2.0e-115 419.9 328 63.7
CsaV3_2G019600 Cucumis sativus L. HOM05D004012 ORTHO05D004752 4.5e-115 418.7 335 62.7
Eucgr.I00032 Eucalyptus grandis HOM05D004012 ORTHO05D004752 7.7e-115 417.9 328 63.7
arahy.Tifrunner.gnm1.ann1.5Q2P9B Arachis hypogaea HOM05D004012 ORTHO05D004752 5.0e-114 415.2 331 63.7
arahy.Tifrunner.gnm1.ann1.EZQ64B Arachis hypogaea HOM05D004012 ORTHO05D004752 5.0e-114 415.2 331 63.7
Sed0016932 Sechium edule HOM05D004012 ORTHO05D004752 2.5e-113 412.9 334 63.8
GSVIVG01000257001 Vitis vinifera HOM05D004012 ORTHO05D004752 1.2e-112 410.6 308 67.2
Oeu034405.1 Olea europaea HOM05D004012 ORTHO05D004752 2.1e-112 409.8 342 63.2
Medtr1g041405 Medicago truncatula HOM05D004012 ORTHO05D004752 8.0e-112 407.9 350 58.3
Actinidia14359 Actinidia chinensis HOM05D004012 ORTHO05D004752 1.8e-111 406.8 333 63.4
Psat6g104000 Pisum sativum HOM05D004012 ORTHO05D004752 1.8e-111 406.8 349 58.2
TPR.G25177 Trifolium pratense HOM05D004012 ORTHO05D004752 3.1e-108 396.0 343 57.1
ECA238G2948 Erigeron canadensis HOM05D004012 ORTHO05D004752 4.1e-108 395.6 333 59.5
HanXRQChr13g0402671 Helianthus annuus HOM05D004012 ORTHO05D004752 2.7e-107 392.9 337 58.8
PSO210G3799 Papaver somniferum HOM05D004012 ORTHO05D004752 2.7e-107 392.9 332 59.9
PSO761G0211 Papaver somniferum HOM05D004012 ORTHO05D004752 4.5e-107 392.1 332 60.5
MBI06_g32154_MAGBIO Magnolia biondii HOM05D004012 ORTHO05D004752 5.9e-107 391.7 358 56.4
Thhalv10013606m.g Eutrema salsugineum HOM05D004012 ORTHO05D004752 7.7e-107 391.3 328 57.6
Cc07_g20580 Coffea canephora HOM05D004012 ORTHO05D004752 1.7e-106 390.2 289 68.5
MBI10_g20270_MAGBIO Magnolia biondii HOM05D004012 ORTHO05D004752 2.5e-105 386.3 334 57.8
Sabra17G0101400 Salix brachista HOM05D004012 ORTHO05D004752 3.3e-105 386.0 318 63.2
EL10Ac4g09708 Beta vulgaris HOM05D004012 ORTHO05D004752 7.2e-105 384.8 331 59.5
Sabra17G0104000 Salix brachista HOM05D004012 ORTHO05D004752 1.2e-104 384.0 318 62.9
TAR376G0099 Trochodendron aralioides HOM05D004012 ORTHO05D004752 1.2e-104 384.0 281 67.6
unitig_0.g354 Utricularia gibba HOM05D004012 ORTHO05D004752 1.0e-103 380.9 336 58.3
Sp6g25900 Schrenkiella parvula HOM05D004012 ORTHO05D004752 5.2e-103 378.6 328 56.1
Cc07_g20480 Coffea canephora HOM05D004012 ORTHO05D004752 1.2e-102 377.5 289 67.1
CDE05G2224 Ceratophyllum demersum HOM05D004012 ORTHO05D004752 1.3e-101 374.0 332 57.5
Aa31LG11G11210 Aethionema arabicum HOM05D004012 ORTHO05D004752 2.2e-101 373.2 349 52.4
BcaB08g36680 Brassica carinata HOM05D004012 ORTHO05D004752 3.7e-101 372.5 332 53.6
Carub.0006s1668 Capsella rubella HOM05D004012 ORTHO05D004752 4.9e-101 372.1 328 55.2
AT5G18420 Arabidopsis thaliana HOM05D004012 ORTHO05D004752 6.3e-101 371.7 328 55.2
DCAR_009624 Daucus carota HOM05D004012 ORTHO05D004752 2.4e-100 369.8 328 59.1
C09p58260 Brassica napus HOM05D004012 ORTHO05D004752 5.0e-98 362.1 346 51.4
vmacro21003 Vaccinium macrocarpon HOM05D004012 ORTHO05D004752 8.6e-98 361.3 313 58.1
BolC9t58691H Brassica oleracea HOM05D004012 ORTHO05D004752 3.3e-97 359.4 347 51.0
C03p10330 Brassica napus HOM05D004012 ORTHO05D004752 4.3e-97 359.0 348 53.7
BraA03t10211Z Brassica rapa HOM05D004012 ORTHO05D004752 4.3e-97 359.0 348 53.7
A10p21150 Brassica napus HOM05D004012 ORTHO05D004752 7.3e-97 358.2 352 50.6
BraA10t44178Z Brassica rapa HOM05D004012 ORTHO05D004752 7.3e-97 358.2 352 50.6
ATR1089G159 Amborella trichopoda HOM05D004012 ORTHO05D004752 1.2e-96 357.5 335 55.5
BolC3t13514H Brassica oleracea HOM05D004012 ORTHO05D004752 2.8e-96 356.3 348 53.4
Duzib147G1077 Durio zibethinus HOM05D004012 ORTHO05D004752 1.8e-95 353.6 337 59.3
Nitab4.5_0000064g0090 Nicotiana tabacum HOM05D004012 ORTHO05D004752 4.0e-95 352.4 283 63.6
AL6G29670 Arabidopsis lyrata HOM05D004012 ORTHO05D004752 2.6e-94 349.7 280 60.0
Peaxi162Scf00621g00412 Petunia axillaris HOM05D004012 ORTHO05D004752 2.6e-94 349.7 289 62.6
CARHR194600 Cardamine hirsuta HOM05D004012 ORTHO05D004752 5.8e-94 348.6 331 52.9
Actinidia12239 Actinidia chinensis HOM05D004012 ORTHO05D004752 1.7e-93 347.1 212 76.9
TWI79G0644 Tripterygium wilfordii HOM05D004012 ORTHO05D004752 2.2e-93 346.7 332 56.9
Solyc04g024500.3 Solanum lycopersicum HOM05D004012 ORTHO05D004752 1.6e-91 340.5 283 62.2
PGSC0003DMG401004242 Solanum tuberosum HOM05D004012 ORTHO05D004752 1.6e-91 340.5 287 62.0
Duzib187G0370 Durio zibethinus HOM05D004012 ORTHO05D004752 1.7e-90 337.0 211 76.3
Lsat_1_v5_gn_0_9061 Lactuca sativa HOM05D004012 ORTHO05D004752 2.3e-90 336.7 325 53.8
Duzib264G1318 Durio zibethinus HOM05D004012 ORTHO05D004752 8.6e-90 334.7 211 75.8
CDE05G3168 Ceratophyllum demersum HOM05D004012 ORTHO05D004752 9.5e-89 331.3 338 53.0
Oeu036288.1 Olea europaea HOM05D004012 ORTHO05D004752 4.7e-88 328.9 296 57.8
THA.LOC104806688 Tarenaya hassleriana HOM05D004012 ORTHO05D004752 6.2e-88 328.6 335 51.3
Nitab4.5_0005261g0010 Nicotiana tabacum HOM05D004012 ORTHO05D004752 5.8e-86 322.0 283 60.1
Ah.02g118090 Amaranthus hybridus HOM05D004012 ORTHO05D004752 1.3e-85 320.9 331 53.2
Cpa.g.sc138.55 Carica papaya HOM05D004012 ORTHO05D004752 2.2e-85 320.1 235 67.2
AagrBONN_evm.TU.Sc2ySwM_228.2915 Anthoceros agrestis HOM05D004012 ORTHO05D004752 7.0e-84 315.1 332 49.7
Lj4A823T24 Lonicera japonica HOM05D004012 ORTHO05D004752 2.1e-83 313.5 193 76.2
Mapoly0005s0018 Marchantia polymorpha HOM05D004012 ORTHO05D004752 1.2e-80 304.3 331 46.8
Actinidia30855 Actinidia chinensis HOM05D004012 ORTHO05D004752 2.8e-80 303.1 333 52.0
Lsat_1_v5_gn_5_118080 Lactuca sativa HOM05D004012 ORTHO05D004752 4.0e-79 299.3 328 50.3
HPP92_005635 Vanilla planifolia HOM05D004012 ORTHO05D004752 6.8e-79 298.5 249 60.6
Os11g0240900 Oryza sativa ssp. japonica HOM05D004012 ORTHO05D004752 7.5e-78 295.0 322 47.5
DCAR_019944 Daucus carota HOM05D004012 ORTHO05D004752 1.3e-77 294.3 280 55.7
Cc07_g20540 Coffea canephora HOM05D004012 ORTHO05D004752 2.2e-77 293.5 284 54.9
Pp3c24_6950 Physcomitrium patens HOM05D004012 ORTHO05D004752 1.2e-75 287.7 316 49.1
Pp3c20_12330 Physcomitrium patens HOM05D004012 ORTHO05D004752 4.3e-73 279.3 327 45.9
Lju41A56G29 Lonicera japonica HOM05D004012 ORTHO05D004752 5.2e-71 272.3 368 44.3
Zm00001eb112220 Zea mays HOM05D004012 ORTHO05D004752 2.0e-70 270.4 327 45.3
QL10p034897 Quercus lobata HOM05D004012 ORTHO05D004752 2.2e-69 266.9 164 75.6
Ah.06g188310 Amaranthus hybridus HOM05D004012 ORTHO05D004752 4.9e-69 265.8 275 50.9
CBR_g22449 Chara braunii HOM05D004012 ORTHO05D004752 5.4e-68 262.3 320 44.7
Zm00001eb167940 Zea mays HOM05D004012 ORTHO05D004752 1.3e-66 257.7 327 44.3
Pp3c23_1780 Physcomitrium patens HOM05D004012 ORTHO05D004752 2.5e-65 253.4 252 52.4
Zm00001eb138450 Zea mays HOM05D004012 ORTHO05D004752 2.9e-61 240.0 284 49.3
HPP92_005646 Vanilla planifolia HOM05D004012 ORTHO05D004752 7.6e-54 215.3 240 48.8
BcaC04g18693 Brassica carinata HOM05D004012 ORTHO05D004752 2.1e-48 197.2 335 38.5
SHI03102 Sapria himalayana HOM05D004012 ORTHO05D004752 1.1e-47 194.9 154 61.0
SMO196G0070 Selaginella moellendorffii HOM05D004012 ORTHO05D004752 5.3e-47 192.6 175 52.6
HPP92_005679 Vanilla planifolia HOM05D004012 ORTHO05D004752 1.2e-38 164.9 313 37.4
QL10p034900 Quercus lobata HOM05D004012 ORTHO05D004752 6.3e-32 142.5 121 62.0
TPR.G34339 Trifolium pratense HOM05D004012 ORTHO05D004752 5.5e-28 129.4 394 28.2
HPP92_005645 Vanilla planifolia HOM05D004012 ORTHO05D004752 1.8e-26 124.4 71 85.9
Actinidia12240 Actinidia chinensis HOM05D004012 ORTHO05D004752 4.2e-20 103.2 98 54.1
Haze_19373 Corylus avellana HOM05D004012 ORTHO05D004752 1.0e-18 98.6 51 92.2
Nitab4.5_0000064g0100 Nicotiana tabacum HOM05D004012 ORTHO05D004752 1.4e-18 98.2 71 69.0
Cre17.g726800 Chlamydomonas reinhardtii HOM05D004012 ORTHO05D004752 2.3e-18 97.4 409 26.7
Nitab4.5_0005261g0020 Nicotiana tabacum HOM05D004012 ORTHO05D004752 3.9e-18 96.7 50 90.0
Solyc04g024510.3 Solanum lycopersicum HOM05D004012 ORTHO05D004752 5.1e-18 96.3 51 90.2
QL10p034885 Quercus lobata HOM05D004012 ORTHO05D000004 4.8e-16 89.7 47 89.4
Peaxi162Scf00621g00413 Petunia axillaris HOM05D004012 ORTHO05D004752 1.1e-15 88.6 49 83.7
THA.LOC104799828 Tarenaya hassleriana HOM05D004012 ORTHO05D004752 3.1e-15 87.0 76 60.5
DCAR_015558 Daucus carota HOM05D004012 ORTHO05D004752 3.5e-14 83.6 187 36.9
SEGI_14103 Sequoiadendron giganteum HOM05D004012 ORTHO05D004752 5.9e-14 82.8 50 78.0
VMungo0647G1024 Vigna mungo HOM05D004443 ORTHO05D005421 5.5e-12 76.3 70 52.9
PSO761G0569 Papaver somniferum HOM05D004012 ORTHO05D004752 9.4e-12 75.5 46 78.3
Lsat_1_v5_gn_2_19540 Lactuca sativa HOM05D004012 ORTHO05D004752 1.6e-11 74.7 78 51.3
SHI03103 Sapria himalayana HOM05D004012 ORTHO05D004752 5.2e-10 69.7 74 54.1
Cc07_g20530 Coffea canephora HOM05D004012 ORTHO05D004752 3.1e-07 60.5 50 58.0
Os12g0197900 Oryza sativa ssp. japonica HOM05D004012 ORTHO05D004752 3.1e-07 60.5 33 75.8
Actinidia20627 Actinidia chinensis HOM05D004012 ORTHO05D004752 4.1e-07 60.1 61 52.5
Haze_27454 Corylus avellana HOM05D004012 ORTHO05D004752 1.2e-06 58.5 62 48.4


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