Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G3644 Fragaria x ananassa HOM05D004480 ORTHO05D005546 3.8e-260 901.0 459 100.0
FAN12G1968 Fragaria x ananassa HOM05D004480 ORTHO05D005546 9.8e-248 859.8 452 96.7
FvH4_4g10760 Fragaria vesca HOM05D004480 ORTHO05D005546 6.0e-245 850.5 436 99.1
RcHm_v2.0_Chr1g0334711 Rosa chinensis HOM05D004480 ORTHO05D005546 7.3e-227 790.4 469 86.4
RcHm_v2.0_Chr7g0210541 Rosa chinensis HOM05D004480 ORTHO05D005546 9.6e-227 790.0 469 86.4
FAN03G0050 Fragaria x ananassa HOM05D004480 ORTHO05D005546 2.0e-224 782.3 476 84.9
FAN01G1951 Fragaria x ananassa HOM05D004480 ORTHO05D005546 3.9e-220 768.1 465 85.4
FAN06G1845 Fragaria x ananassa HOM05D004480 ORTHO05D005546 2.0e-216 755.7 461 84.4
FAN10G1488 Fragaria x ananassa HOM05D004480 ORTHO05D005546 2.5e-203 712.2 466 80.0
FvH4_7g06440 Fragaria vesca HOM05D004480 ORTHO05D005546 6.2e-202 707.6 382 92.7
Prupe.5G084300 Prunus persica HOM05D004480 ORTHO05D005546 5.1e-196 688.0 489 73.4
MD01G1035500 Malus domestica HOM05D004480 ORTHO05D005546 2.8e-194 682.2 471 73.9
MD15G1320300 Malus domestica HOM05D004480 ORTHO05D005546 4.8e-194 681.4 471 73.9
Manes.17G005700 Manihot esculenta HOM05D004480 ORTHO05D005546 1.6e-189 666.4 472 70.8
QL11p020579 Quercus lobata HOM05D004480 ORTHO05D005546 4.6e-189 664.8 469 71.6
Thecc.05G221800 Theobroma cacao HOM05D004480 ORTHO05D005546 6.7e-188 661.0 471 71.8
Duzib128G0969 Durio zibethinus HOM05D004480 ORTHO05D005546 7.4e-187 657.5 436 75.2
CiPaw.01G203500 Carya illinoinensis HOM05D004480 ORTHO05D005546 6.9e-185 651.0 476 69.7
Hma1.2p1_0513F.1_g169740 Hydrangea macrophylla HOM05D004480 ORTHO05D005546 1.7e-183 646.4 473 70.2
Gohir.A08G013400 Gossypium hirsutum HOM05D004480 ORTHO05D005546 2.2e-183 646.0 468 70.9
Gorai.004G019100 Gossypium raimondii HOM05D004480 ORTHO05D005546 2.2e-183 646.0 468 70.7
Atru.chr11.1453 Acer truncatum HOM05D004480 ORTHO05D005546 6.5e-183 644.4 468 69.0
Atru.chr11.1483 Acer truncatum HOM05D004480 ORTHO05D005546 6.5e-183 644.4 468 69.0
Ca_17076_v3 Cicer arietinum L. HOM05D004480 ORTHO05D005546 1.1e-182 643.7 460 70.2
Gohir.D08G023800 Gossypium hirsutum HOM05D004480 ORTHO05D005546 1.4e-182 643.3 468 70.7
GSVIVG01038269001 Vitis vinifera HOM05D004480 ORTHO05D005546 9.4e-182 640.6 472 71.4
Cfa008538 Carpinus fangiana HOM05D004480 ORTHO05D005546 2.1e-181 639.4 476 68.5
CANSAT21G2297 Cannabis sativa HOM05D004480 ORTHO05D005546 2.7e-181 639.0 472 68.6
Potri.017G001100 Populus trichocarpa HOM05D004480 ORTHO05D005546 1.4e-180 636.7 472 68.6
SGA_v2.0_scaffold19G08907 Striga asiatica HOM05D004480 ORTHO05D005546 1.8e-180 636.3 477 68.1
Actinidia18384 Actinidia chinensis HOM05D004480 ORTHO05D005546 2.3e-180 636.0 471 68.8
CSS0010781 Camellia sinensis var. sinensis HOM05D004480 ORTHO05D005546 5.1e-180 634.8 471 69.2
Sed0006001 Sechium edule HOM05D004480 ORTHO05D005546 5.1e-180 634.8 481 68.8
Ciclev10008180m.g Citrus clementina HOM05D004480 ORTHO05D005546 6.7e-180 634.4 476 68.7
Lalb_Chr08g0233091 Lupinus albus HOM05D004480 ORTHO05D005546 6.7e-180 634.4 468 69.4
PGR119G0799 Punica granatum HOM05D004480 ORTHO05D005546 8.8e-180 634.0 469 69.3
Nn7g35785 Nelumbo nucifera HOM05D004480 ORTHO05D005546 1.5e-179 633.3 471 68.8
Glyma.18G043300 Glycine max HOM05D004480 ORTHO05D005546 3.3e-179 632.1 464 68.8
Cc03_g16200 Coffea canephora HOM05D004480 ORTHO05D005546 7.4e-179 630.9 468 67.9
MBI07_g30868_MAGBIO Magnolia biondii HOM05D004480 ORTHO05D005546 2.8e-178 629.0 499 65.7
Sc03g0007800 Simmondsia chinensis HOM05D004480 ORTHO05D005546 8.2e-178 627.5 453 70.2
Migut.N03010 Erythranthe guttata HOM05D004480 ORTHO05D005546 1.1e-177 627.1 467 67.7
CsaV3_3G003300 Cucumis sativus L. HOM05D004480 ORTHO05D005546 1.4e-177 626.7 477 68.3
MSTRG.22059 Avicennia marina HOM05D004480 ORTHO05D005546 6.9e-177 624.4 491 65.0
SGA_v2.0_scaffold25G11023 Striga asiatica HOM05D004480 ORTHO05D005546 1.5e-176 623.2 485 66.0
PGR083G0026 Punica granatum HOM05D004480 ORTHO05D005546 2.0e-176 622.9 469 68.0
Sopen01g003100 Solanum pennellii HOM05D004480 ORTHO05D005546 2.0e-176 622.9 463 67.4
Solyc01g007120.3 Solanum lycopersicum HOM05D004480 ORTHO05D005546 2.6e-176 622.5 458 68.1
Phvul.001G227600 Phaseolus vulgaris HOM05D004480 ORTHO05D005546 3.4e-176 622.1 466 68.5
SalBow1G2458 Salvia bowleyana HOM05D004480 ORTHO05D005546 5.9e-176 621.3 463 68.3
MELO3C013997.2 Cucumis melo HOM05D004480 ORTHO05D005546 2.9e-175 619.0 477 67.1
TAR626G1520 Trochodendron aralioides HOM05D004480 ORTHO05D005546 2.9e-175 619.0 504 65.1
TWI74G1000 Tripterygium wilfordii HOM05D004480 ORTHO05D005546 6.5e-175 617.8 472 68.0
Eucgr.H00240 Eucalyptus grandis HOM05D004480 ORTHO05D005546 8.5e-175 617.5 467 66.4
Medtr4g094615 Medicago truncatula HOM05D004480 ORTHO05D005546 1.9e-174 616.3 464 67.5
Nitab4.5_0002844g0040 Nicotiana tabacum HOM05D004480 ORTHO05D005546 4.2e-174 615.1 470 67.0
TPR.G4936 Trifolium pratense HOM05D004480 ORTHO05D005546 4.2e-174 615.1 464 68.5
TAR623G1647 Trochodendron aralioides HOM05D004480 ORTHO05D005546 1.6e-173 613.2 507 64.1
Hund12181 Selenicereus undatus HOM05D004480 ORTHO05D005546 2.1e-173 612.8 487 65.5
PGSC0003DMG400021321 Solanum tuberosum HOM05D004480 ORTHO05D005546 2.1e-173 612.8 460 67.2
Lj1g0018422 Lotus japonicus HOM05D004480 ORTHO05D005546 6.1e-173 611.3 462 67.7
BcaB01g00536 Brassica carinata HOM05D004480 ORTHO05D005546 1.4e-172 610.1 459 68.2
vmacro20035 Vaccinium macrocarpon HOM05D004480 ORTHO05D005546 1.8e-172 609.8 480 65.6
arahy.Tifrunner.gnm1.ann1.0BX3U4 Arachis hypogaea HOM05D004480 ORTHO05D005546 2.3e-172 609.4 448 68.8
Sp5g10950 Schrenkiella parvula HOM05D004480 ORTHO05D005546 3.9e-172 608.6 465 66.5
A03p48230 Brassica napus HOM05D004480 ORTHO05D005546 1.1e-171 607.1 459 67.5
BraA03t13931Z Brassica rapa HOM05D004480 ORTHO05D005546 1.5e-171 606.7 465 66.9
BcaC06g33042 Brassica carinata HOM05D004480 ORTHO05D005546 2.6e-171 605.9 458 68.1
vmacro00734 Vaccinium macrocarpon HOM05D004480 ORTHO05D005546 3.3e-171 605.5 512 62.5
Oeu019179.1 Olea europaea HOM05D004480 ORTHO05D005546 2.2e-170 602.8 523 61.4
THA.LOC104827565 Tarenaya hassleriana HOM05D004480 ORTHO05D005546 3.7e-170 602.1 467 66.4
AL5G31690 Arabidopsis lyrata HOM05D004480 ORTHO05D005546 1.1e-169 600.5 456 68.0
Dinv41802 Davidia involucrata HOM05D004480 ORTHO05D005546 1.4e-169 600.1 387 76.7
A01p23550 Brassica napus HOM05D004480 ORTHO05D005546 2.4e-169 599.4 458 67.2
C07p46260 Brassica napus HOM05D004480 ORTHO05D005546 4.1e-169 598.6 459 67.5
BraA01t02261Z Brassica rapa HOM05D004480 ORTHO05D005546 4.1e-169 598.6 469 65.7
Peaxi162Scf00586g00512 Petunia axillaris HOM05D004480 ORTHO05D005546 7.0e-169 597.8 434 70.3
VMungo1383G0315 Vigna mungo HOM05D004480 ORTHO05D005546 7.0e-169 597.8 463 66.7
BraA09t39892Z Brassica rapa HOM05D004480 ORTHO05D005546 9.1e-169 597.4 465 66.5
A09p44300 Brassica napus HOM05D004480 ORTHO05D005546 3.5e-168 595.5 458 67.5
Sed0005158 Sechium edule HOM05D004480 ORTHO05D005546 3.5e-168 595.5 382 77.0
HanXRQChr14g0458331 Helianthus annuus HOM05D004480 ORTHO05D005546 4.5e-168 595.1 471 67.3
BcaNung06395 Brassica carinata HOM05D004480 ORTHO05D005546 7.7e-168 594.3 456 67.1
C01p29210 Brassica napus HOM05D004480 ORTHO05D005546 7.7e-168 594.3 456 67.1
Carub.0005s1764 Capsella rubella HOM05D004480 ORTHO05D005546 7.7e-168 594.3 461 66.4
Dinv39175 Davidia involucrata HOM05D004480 ORTHO05D005546 7.7e-168 594.3 449 67.9
HanXRQChr15g0465141 Helianthus annuus HOM05D004480 ORTHO05D005546 1.0e-167 594.0 471 66.9
SalBow6G1632 Salvia bowleyana HOM05D004480 ORTHO05D005546 5.0e-167 591.7 468 65.2
BolC7t45142H Brassica oleracea HOM05D004480 ORTHO05D005546 1.1e-166 590.5 471 65.8
VMungo1309G1911 Vigna mungo HOM05D004480 ORTHO05D005546 4.2e-166 588.6 464 65.9
BcaNung00392 Brassica carinata HOM05D004480 ORTHO05D005546 5.5e-166 588.2 458 66.2
BolC1t02850H Brassica oleracea HOM05D004480 ORTHO05D005546 1.2e-165 587.0 473 64.7
Nitab4.5_0002686g0020 Nicotiana tabacum HOM05D004480 ORTHO05D005546 8.0e-165 584.3 470 65.1
THA.LOC104802357 Tarenaya hassleriana HOM05D004480 ORTHO05D005546 2.3e-164 582.8 459 67.1
COL.COLO4_23990 Corchorus olitorius HOM05D004480 ORTHO05D005546 8.8e-164 580.9 442 68.1
Thhalv10010355m.g Eutrema salsugineum HOM05D004480 ORTHO05D005546 1.5e-163 580.1 465 64.1
Glyma.11G213400 Glycine max HOM05D004480 ORTHO05D005546 4.4e-163 578.6 369 76.4
Sabra17G0005500 Salix brachista HOM05D000001 ORTHO05D005546 1.7e-162 576.6 377 74.5
Psat7g090480 Pisum sativum HOM05D004480 ORTHO05D005546 4.1e-161 572.0 386 72.5
Rhsim09G0001300 Rhododendron simsii HOM05D004480 ORTHO05D005546 1.2e-160 570.5 433 67.2
CARHR160850 Cardamine hirsuta HOM05D004480 ORTHO05D005546 1.6e-160 570.1 466 63.7
Aa31LG1G7840 Aethionema arabicum HOM05D004480 ORTHO05D005546 1.0e-159 567.4 442 65.8
ECA248G1292 Erigeron canadensis HOM05D004480 ORTHO05D005546 1.0e-159 567.4 460 65.2
DCAR_011737 Daucus carota HOM05D004480 ORTHO05D005546 1.3e-159 567.0 522 59.6
ATR0743G007 Amborella trichopoda HOM05D004480 ORTHO05D005546 1.7e-159 566.6 481 62.4
AT3G51270 Arabidopsis thaliana HOM05D004480 ORTHO05D005546 3.8e-159 565.5 466 63.7
arahy.Tifrunner.gnm1.ann1.JT43NG Arachis hypogaea HOM05D004480 ORTHO05D005546 5.0e-159 565.1 436 66.5
PSO732G0488 Papaver somniferum HOM05D004480 ORTHO05D005546 6.5e-159 564.7 457 65.0
PSO675G8718 Papaver somniferum HOM05D004480 ORTHO05D005546 1.1e-158 563.9 457 65.0
Os01g0888700 Oryza sativa ssp. japonica HOM05D004480 ORTHO05D005546 2.1e-157 559.7 494 59.5
Cpa.g.sc9.237 Carica papaya HOM05D004480 ORTHO05D005546 1.4e-156 557.0 473 63.4
C08p26540 Brassica napus HOM05D004480 ORTHO05D005546 2.6e-155 552.7 466 63.1
Haze_11102 Corylus avellana HOM05D004480 ORTHO05D005546 2.6e-155 552.7 447 64.4
HanXRQChr15g0464981 Helianthus annuus HOM05D004480 ORTHO05D005546 4.4e-155 552.0 332 80.4
BolC8t50268H Brassica oleracea HOM05D004480 ORTHO05D005546 2.2e-154 549.7 481 62.0
CAN.G574.17 Capsicum annuum HOM05D004480 ORTHO05D005546 1.1e-153 547.4 427 66.0
Zm00001eb145320 Zea mays HOM05D004480 ORTHO05D005546 1.6e-152 543.5 478 60.3
Zm00001eb365940 Zea mays HOM05D004480 ORTHO05D005546 7.7e-152 541.2 342 76.9
Duzib177G0198 Durio zibethinus HOM05D004480 ORTHO05D005546 2.2e-151 539.7 402 69.2
AUR62001702 Chenopodium quinoa HOM05D004480 ORTHO05D005546 1.5e-147 526.9 437 64.3
Mapoly0052s0036 Marchantia polymorpha HOM05D004480 ORTHO05D005546 2.6e-147 526.2 454 61.0
BcaC09g50090 Brassica carinata HOM05D004480 ORTHO05D005546 3.4e-147 525.8 344 75.9
Lju124A7T24 Lonicera japonica HOM05D004480 ORTHO05D005546 2.5e-142 509.6 279 85.7
Lsat_1_v5_gn_5_33821 Lactuca sativa HOM05D004480 ORTHO05D005546 4.3e-142 508.8 464 59.9
Oeu061379.1 Olea europaea HOM05D004480 ORTHO05D005546 2.1e-141 506.5 286 83.9
unitig_62.g23773 Utricularia gibba HOM05D004480 ORTHO05D005546 1.3e-138 497.3 503 54.1
SMO203G0211 Selaginella moellendorffii HOM05D004480 ORTHO05D005546 4.1e-137 492.3 329 71.1
Aqoxy2G00126 Aquilegia oxysepala HOM05D004480 ORTHO05D005546 4.6e-136 488.8 504 53.4
Pp3c20_22360 Physcomitrium patens HOM05D004480 ORTHO05D005546 1.1e-134 484.2 457 56.5
AagrBONN_evm.TU.Sc2ySwM_228.3019 Anthoceros agrestis HOM05D004480 ORTHO05D005546 1.9e-134 483.4 326 70.9
CDE02G2467 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 1.4e-132 477.2 472 54.9
SHI53263 Sapria himalayana HOM05D004480 ORTHO05D005546 5.2e-132 475.3 334 70.7
CDE09G0719 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 4.4e-131 472.2 403 61.3
ClCG00G001030 Citrullus lanatus HOM05D004480 ORTHO05D005546 1.8e-124 450.3 426 59.2
CDE09G0674 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 4.0e-124 449.1 424 57.5
CBR_g22944 Chara braunii HOM05D004480 ORTHO05D005546 7.8e-120 434.9 270 73.3
ClCG10G003270 Citrullus lanatus HOM05D004480 ORTHO05D005546 1.0e-119 434.5 565 48.5
CDE09G1409 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 1.2e-117 427.6 417 55.9
CDE02G0168 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 1.6e-117 427.2 350 61.4
AUR62020079 Chenopodium quinoa HOM05D004480 ORTHO05D005546 4.1e-113 412.5 467 51.0
SEGI_41177 Sequoiadendron giganteum HOM05D004480 ORTHO05D005546 2.7e-104 383.3 387 54.0
PRCOL_00001861 Prasinoderma coloniale HOM05D004480 ORTHO05D005546 5.3e-100 369.0 328 56.1
MCO09G317 Micromonas commoda HOM05D004480 ORTHO05D005546 3.8e-98 362.8 337 55.5
CDE09G0134 Ceratophyllum demersum HOM05D004480 ORTHO05D005546 4.9e-98 362.5 287 63.8
Migut.O00494 Erythranthe guttata HOM05D004480 ORTHO05D005546 9.3e-81 305.1 467 41.5
Cre03.g159900 Chlamydomonas reinhardtii HOM05D004480 ORTHO05D005546 1.0e-74 285.0 260 56.2
Ciclev10020879m.g Citrus clementina HOM05D004480 ORTHO05D005546 9.4e-65 251.9 467 38.3
FAN07G0363 Fragaria x ananassa HOM05D004480 ORTHO05D005546 5.0e-58 229.6 195 68.2
Cfa009489 Carpinus fangiana HOM05D004480 ORTHO05D005546 6.3e-53 212.6 392 35.7
HPP92_020625 Vanilla planifolia HOM05D004480 ORTHO05D005546 1.1e-44 185.3 241 46.9
ClCG00G000020 Citrullus lanatus HOM05D004480 ORTHO05D005546 1.5e-38 164.9 402 32.6
SMO327G0006 Selaginella moellendorffii HOM05D004480 ORTHO05D005546 3.1e-36 157.1 119 66.4
Zm00001eb233680 Zea mays HOM05D009386 ORTHO05D011419 3.1e-28 130.6 141 51.1
SEGI_14248 Sequoiadendron giganteum HOM05D004480 ORTHO05D005546 4.1e-28 130.2 81 74.1
Zm00001eb011520 Zea mays HOM05D009386 ORTHO05D011419 1.9e-20 104.8 115 49.6
Zm00001eb393850 Zea mays HOM05D009386 ORTHO05D011419 2.4e-20 104.4 107 53.3
Lju124A7T25 Lonicera japonica HOM05D004480 ORTHO05D005546 1.6e-19 101.7 177 41.8
Oeu061378.1 Olea europaea HOM05D004480 ORTHO05D005546 4.6e-19 100.1 164 40.2
Medtr8g090145 Medicago truncatula HOM05D004480 ORTHO05D005546 4.1e-12 77.0 182 34.1
MCO12G200 Micromonas commoda HOM05D003858 ORTHO05D005878 6.2e-08 63.2 205 23.4


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