Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G1097 Fragaria x ananassa HOM05D006585 ORTHO05D007798 4.2e-179 631.3 337 100.0
FAN12G1379 Fragaria x ananassa HOM05D006585 ORTHO05D007798 4.2e-179 631.3 337 100.0
FAN17G2552 Fragaria x ananassa HOM05D006585 ORTHO05D007798 1.5e-160 569.7 317 96.2
FvH4_4g25900 Fragaria vesca HOM05D006585 ORTHO05D007798 1.1e-155 553.5 317 95.0
RcHm_v2.0_Chr4g0433351 Rosa chinensis HOM05D006585 ORTHO05D007798 2.0e-141 506.1 317 87.1
Prupe.1G247500 Prunus persica HOM05D006585 ORTHO05D007798 3.9e-84 315.8 302 55.6
Prupe.1G247600 Prunus persica HOM05D006585 ORTHO05D007798 1.4e-81 307.4 308 54.9
FAN07G1571 Fragaria x ananassa HOM05D006585 ORTHO05D007798 2.4e-81 306.6 154 96.8
FAN22G0568 Fragaria x ananassa HOM05D006585 ORTHO05D007798 4.9e-79 298.9 170 88.2
MD13G1097900 Malus domestica HOM05D006585 ORTHO05D007798 2.3e-68 263.5 304 50.0
MD13G1097800 Malus domestica HOM05D006585 ORTHO05D007798 3.0e-68 263.1 326 53.4
Cfa009198 Carpinus fangiana HOM05D006585 ORTHO05D007798 1.5e-64 250.8 320 45.3
Duzib248G0505 Durio zibethinus HOM05D006585 ORTHO05D007798 4.9e-63 245.7 318 44.7
QL03p058556 Quercus lobata HOM05D006585 ORTHO05D007798 1.4e-62 244.2 310 47.7
CiPaw.05G183700 Carya illinoinensis HOM05D006585 ORTHO05D007798 2.4e-62 243.4 302 45.7
COL.COLO4_24245 Corchorus olitorius HOM05D006585 ORTHO05D002520 3.9e-60 236.1 323 42.1
Thecc.02G257200 Theobroma cacao HOM05D006585 ORTHO05D007798 1.5e-59 234.2 327 42.2
Dinv24805 Davidia involucrata HOM05D006585 ORTHO05D007798 4.3e-59 232.6 318 44.0
CANSAT01G1755 Cannabis sativa HOM05D006585 ORTHO05D007798 2.1e-58 230.3 329 41.9
ClCG08G017740 Citrullus lanatus HOM05D006585 ORTHO05D007798 4.8e-58 229.2 315 42.9
arahy.Tifrunner.gnm1.ann1.I6QGYY Arachis hypogaea HOM05D006585 ORTHO05D007798 1.1e-57 228.0 318 43.1
Gorai.005G179800 Gossypium raimondii HOM05D006585 ORTHO05D007798 4.0e-57 226.1 318 43.1
arahy.Tifrunner.gnm1.ann1.QD46ZG Arachis hypogaea HOM05D006585 ORTHO05D007798 1.7e-55 220.7 320 42.2
Lj4g0008721 Lotus japonicus HOM05D006585 ORTHO05D007798 3.8e-55 219.5 324 42.9
Psat1g023160 Pisum sativum HOM05D006585 ORTHO05D007798 2.5e-54 216.9 320 41.6
Manes.13G025900 Manihot esculenta HOM05D006585 ORTHO05D007798 4.2e-54 216.1 329 41.6
Sed0016045 Sechium edule HOM05D006585 ORTHO05D007798 1.2e-53 214.5 301 42.9
Gohir.A03G136500 Gossypium hirsutum HOM05D006585 ORTHO05D007798 2.1e-53 213.8 318 41.2
Medtr2g079800 Medicago truncatula HOM05D006585 ORTHO05D007798 2.1e-53 213.8 321 42.1
Gohir.D02G159700 Gossypium hirsutum HOM05D006585 ORTHO05D007798 3.9e-52 209.5 282 42.6
Glyma.18G143200 Glycine max HOM05D006585 ORTHO05D007798 5.7e-51 205.7 320 40.3
Medtr8g069560 Medicago truncatula HOM05D006585 ORTHO05D007798 7.4e-51 205.3 324 42.0
Phvul.003G063800 Phaseolus vulgaris HOM05D006585 ORTHO05D007798 4.8e-50 202.6 321 39.9
TWI36G0027 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 6.3e-50 202.2 299 42.5
Actinidia27800 Actinidia chinensis HOM05D006585 ORTHO05D007798 2.0e-48 197.2 308 41.6
Cpa.g.sc33.3 Carica papaya HOM05D006585 ORTHO05D007798 1.0e-47 194.9 322 39.4
Ca_22577_v3 Cicer arietinum L. HOM05D006585 ORTHO05D007798 2.2e-47 193.7 324 39.2
Sabra10G0023300 Salix brachista HOM05D000740 ORTHO05D003236 6.5e-47 192.2 326 37.4
TAR371G0523 Trochodendron aralioides HOM05D006585 ORTHO05D007798 6.5e-47 192.2 316 40.2
Nitab4.5_0002255g0100 Nicotiana tabacum HOM05D006585 ORTHO05D007798 1.4e-46 191.0 333 37.8
Potri.010G044800 Populus trichocarpa HOM05D006585 ORTHO05D007798 1.9e-46 190.7 296 39.5
TWI75G0333 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 1.9e-46 190.7 304 39.5
GSVIVG01004087001 Vitis vinifera HOM05D006585 ORTHO05D007798 1.9e-46 190.7 319 39.5
VMungo0251G2192 Vigna mungo HOM05D006585 ORTHO05D007798 1.2e-45 188.0 317 38.5
Lj6C811T17 Lonicera japonica HOM05D006585 ORTHO05D007798 1.1e-43 181.4 305 41.3
THA.LOC104823651 Tarenaya hassleriana HOM05D006585 ORTHO05D007798 2.2e-42 177.2 307 37.5
Peaxi162Scf00128g00033 Petunia axillaris HOM05D006585 ORTHO05D007798 3.7e-42 176.4 318 36.2
Aqoxy5G03808 Aquilegia oxysepala HOM05D006585 ORTHO05D007798 5.9e-40 169.1 300 38.3
DCAR_031138 Daucus carota HOM05D006585 ORTHO05D007798 5.9e-40 169.1 331 37.5
Solyc05g013360.3 Solanum lycopersicum HOM05D006585 ORTHO05D007798 1.7e-39 167.5 335 36.1
Sopen05g008150 Solanum pennellii HOM05D006585 ORTHO05D007798 4.2e-38 162.9 324 35.5
Nn3g16750 Nelumbo nucifera HOM05D006585 ORTHO05D007798 9.4e-38 161.8 300 38.0
Oeu049180.1 Olea europaea HOM05D006585 ORTHO05D007798 3.0e-36 156.8 309 36.6
Nitab4.5_0002552g0050 Nicotiana tabacum HOM05D006585 ORTHO05D007798 1.5e-35 154.5 318 34.3
HanXRQChr17g0539731 Helianthus annuus HOM05D006585 ORTHO05D007798 7.4e-35 152.1 302 35.1
AT1G10710 Arabidopsis thaliana HOM05D006585 ORTHO05D007798 1.3e-34 151.4 344 33.1
TAR629G0056 Trochodendron aralioides HOM05D006585 ORTHO05D007798 1.3e-34 151.4 281 37.0
Sc04g0009420 Simmondsia chinensis HOM05D006585 ORTHO05D007798 2.8e-34 150.2 323 35.0
AL1G21590 Arabidopsis lyrata HOM05D006585 ORTHO05D007798 3.7e-34 149.8 343 32.1
Ciclev10033875m.g Citrus clementina HOM05D006585 ORTHO05D007798 6.3e-34 149.1 279 36.9
MBI10_g00733_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 8.2e-34 148.7 325 35.4
Sp1g09410 Schrenkiella parvula HOM05D006585 ORTHO05D007798 6.9e-33 145.6 331 37.2
Migut.E00193 Erythranthe guttata HOM05D006585 ORTHO05D007798 9.1e-33 145.2 289 36.0
Aa31LG1G4120 Aethionema arabicum HOM05D006585 ORTHO05D007798 1.2e-32 144.8 289 32.9
GSVIVG01007676001 Vitis vinifera HOM05D006585 ORTHO05D007798 2.6e-32 143.7 195 41.5
Thhalv10007956m.g Eutrema salsugineum HOM05D006585 ORTHO05D007798 2.2e-31 140.6 213 37.6
Dinv20613 Davidia involucrata HOM05D006585 ORTHO05D007798 6.5e-31 139.0 343 32.4
CSS0026295 Camellia sinensis var. sinensis HOM05D006585 ORTHO05D007798 1.1e-30 138.3 124 54.8
COL.COLO4_30156 Corchorus olitorius HOM05D006585 ORTHO05D007798 1.4e-30 137.9 139 49.6
Lsat_1_v5_gn_3_28841 Lactuca sativa HOM05D006585 ORTHO05D007798 7.2e-30 135.6 320 33.4
ECA246G2324 Erigeron canadensis HOM05D000225 ORTHO05D002520 4.7e-29 132.9 288 33.7
AUR62024297 Chenopodium quinoa HOM05D006585 ORTHO05D007798 6.1e-29 132.5 309 35.0
Carub.0001s1022 Capsella rubella HOM05D006585 ORTHO05D007798 7.9e-29 132.1 322 29.5
MBI16_g23844_MAGBIO Magnolia biondii HOM05D006585 ORTHO05D007798 7.9e-29 132.1 285 33.7
Cc11_g15560 Coffea canephora HOM05D006585 ORTHO05D007798 1.4e-28 131.3 348 31.9
BcaC07g41800 Brassica carinata HOM05D006585 ORTHO05D007798 1.5e-27 127.9 332 36.1
BcaB08g37368 Brassica carinata HOM05D006585 ORTHO05D007798 5.7e-27 125.9 197 36.5
EL10Ac6g13783 Beta vulgaris HOM05D006585 ORTHO05D007798 2.8e-26 123.6 315 32.1
Thecc.03G022200 Theobroma cacao HOM05D006585 ORTHO05D007798 3.7e-26 123.2 111 53.2
CARHR010890 Cardamine hirsuta HOM05D006585 ORTHO05D007798 6.3e-26 122.5 308 31.8
C08p48610 Brassica napus HOM05D006585 ORTHO05D007798 1.4e-25 121.3 350 34.6
SGA_v2.0_scaffold87G27084 Striga asiatica HOM05D006585 ORTHO05D007798 4.1e-25 119.8 343 31.8
Lalb_Chr16g0392221 Lupinus albus HOM05D006585 ORTHO05D007798 1.6e-24 117.9 225 38.7
BraA09t41832Z Brassica rapa HOM05D006585 ORTHO05D007798 2.6e-24 117.1 138 44.2
SGA_v2.0_scaffold63G21726 Striga asiatica HOM05D006585 ORTHO05D007798 1.0e-23 115.2 287 31.4
Glyma.08G283200 Glycine max HOM05D006585 ORTHO05D007798 1.3e-23 114.8 89 61.8
HPP92_008331 Vanilla planifolia HOM05D006585 ORTHO05D007798 1.3e-23 114.8 148 42.6
ATR1154G038 Amborella trichopoda HOM05D006585 ORTHO05D007798 2.9e-23 113.6 180 35.6
PSO832G3049 Papaver somniferum HOM05D000629 ORTHO05D007798 6.5e-23 112.5 140 44.3
ATR1154G026 Amborella trichopoda HOM05D006585 ORTHO05D007798 7.2e-22 109.0 180 34.4
A09p64570 Brassica napus HOM05D006585 ORTHO05D007798 7.2e-22 109.0 140 42.1
Ah.03g133160 Amaranthus hybridus HOM05D006585 ORTHO05D007798 1.2e-21 108.2 308 30.5
SalBow8G1297 Salvia bowleyana HOM05D006585 ORTHO05D007798 6.1e-21 105.9 138 44.2
BolC8t52400H Brassica oleracea HOM05D006585 ORTHO05D007798 1.4e-20 104.8 395 29.9
PSO063G7660 Papaver somniferum HOM05D000629 ORTHO05D007798 1.4e-20 104.8 190 36.8
Actinidia08143 Actinidia chinensis HOM05D006585 ORTHO05D007798 3.0e-20 103.6 347 37.2
SHI17754 Sapria himalayana HOM05D006585 ORTHO05D007798 3.0e-20 103.6 218 30.7
Rhsim12G0041300 Rhododendron simsii HOM05D006585 ORTHO05D007798 1.1e-19 101.7 412 29.1
Haze_12236 Corylus avellana HOM05D006585 ORTHO05D007798 2.0e-19 100.9 249 33.3
Zm00001eb382430 Zea mays HOM05D006585 ORTHO05D007798 6.3e-18 95.9 200 36.0
PGR119G1584 Punica granatum HOM05D006585 ORTHO05D007798 1.4e-17 94.7 325 28.9
Atru.chr11.2134 Acer truncatum HOM05D006585 ORTHO05D007798 1.7e-15 87.8 309 27.5
Cc04_g11830 Coffea canephora HOM05D006585 ORTHO05D007798 8.5e-15 85.5 169 33.1
Lalb_Chr16g0392231 Lupinus albus HOM05D006585 ORTHO05D007798 3.2e-14 83.6 107 43.9
PSO063G0496 Papaver somniferum HOM05D006585 ORTHO05D007798 5.5e-14 82.8 182 34.6
TPR.G34666 Trifolium pratense HOM05D006585 ORTHO05D007798 5.5e-14 82.8 186 33.9
Atru.chr11.2118 Acer truncatum HOM05D006585 ORTHO05D007798 7.2e-14 82.4 309 26.5
EL10Ac5g10683 Beta vulgaris HOM05D006585 ORTHO05D007798 9.4e-14 82.0 112 39.3
PSO832G2940 Papaver somniferum HOM05D006585 ORTHO05D007798 8.0e-13 79.0 109 43.1
SEGI_25539 Sequoiadendron giganteum HOM05D006585 ORTHO05D007798 2.8e-10 70.5 101 40.6
SGA_v2.0_scaffold779G53588 Striga asiatica HOM05D006585 ORTHO05D007798 1.4e-09 68.2 93 39.8
SGA_v2.0_scaffold34G13586 Striga asiatica HOM05D006585 ORTHO05D007798 2.4e-09 67.4 93 39.8
AUR62005444 Chenopodium quinoa HOM05D006585 ORTHO05D007798 7.2e-06 55.8 169 31.4


User provided reference genes

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