Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G1036 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.9e-95 352.4 174 100.0
FvH4_4g35001 Fragaria vesca HOM05D003884 ORTHO05D004482 2.8e-94 348.6 174 98.9
FAN07G1004 Fragaria x ananassa HOM05D003884 ORTHO05D004482 3.1e-93 345.1 174 98.3
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 6.9e-85 317.4 160 98.1
RcHm_v2.0_Chr4g0444531 Rosa chinensis HOM05D003884 ORTHO05D004482 1.3e-83 313.2 174 89.1
MD16G1086800 Malus domestica HOM05D003884 ORTHO05D004482 5.5e-66 254.6 175 74.3
Prupe.1G259800 Prunus persica HOM05D003884 ORTHO05D004482 1.6e-65 253.1 184 74.5
MD13G1086700 Malus domestica HOM05D003884 ORTHO05D004482 3.0e-64 248.8 175 74.3
Gohir.D02G165800 Gossypium hirsutum HOM05D003884 ORTHO05D004482 8.8e-56 220.7 160 70.0
Nn4g22884 Nelumbo nucifera HOM05D003884 ORTHO05D004482 4.4e-55 218.4 204 59.8
Duzib248G1092 Durio zibethinus HOM05D003884 ORTHO05D004482 1.7e-54 216.5 160 69.4
Gorai.005G185900 Gossypium raimondii HOM05D003884 ORTHO05D004482 2.8e-54 215.7 160 68.8
Glyma.18G132900 Glycine max HOM05D003884 ORTHO05D004482 3.7e-54 215.3 139 71.9
TAR629G2251 Trochodendron aralioides HOM05D003884 ORTHO05D004482 1.4e-53 213.4 180 65.0
Atru.chr11.1961 Acer truncatum HOM05D003884 ORTHO05D004482 2.4e-53 212.6 174 63.8
Gohir.A03G142500 Gossypium hirsutum HOM05D003884 ORTHO05D004482 6.9e-53 211.1 148 72.3
Manes.05G090800 Manihot esculenta HOM05D003884 ORTHO05D004482 6.9e-53 211.1 125 78.4
AT1G10522 Arabidopsis thaliana HOM05D003884 ORTHO05D004482 1.5e-52 209.9 125 77.6
Dinv30997 Davidia involucrata HOM05D003884 ORTHO05D004482 2.0e-52 209.5 116 82.8
Dinv31106 Davidia involucrata HOM05D003884 ORTHO05D004482 2.0e-52 209.5 116 82.8
Sed0006672 Sechium edule HOM05D003884 ORTHO05D004482 2.0e-52 209.5 116 82.8
Sp1g09160 Schrenkiella parvula HOM05D003884 ORTHO05D004482 3.4e-52 208.8 154 67.5
THA.LOC104819574 Tarenaya hassleriana HOM05D003884 ORTHO05D004482 3.4e-52 208.8 153 69.3
CARHR010670 Cardamine hirsuta HOM05D003884 ORTHO05D004482 5.9e-52 208.0 125 76.8
Eucgr.B02560 Eucalyptus grandis HOM05D003884 ORTHO05D004482 5.9e-52 208.0 179 61.5
CSS0013891 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 7.7e-52 207.6 153 71.2
Ciclev10032870m.g Citrus clementina HOM05D003884 ORTHO05D004482 7.7e-52 207.6 171 62.0
EL10Ac4g10087 Beta vulgaris HOM05D003884 ORTHO05D004482 1.0e-51 207.2 180 61.1
Thecc.02G242500 Theobroma cacao HOM05D003884 ORTHO05D004482 1.0e-51 207.2 177 61.6
Cc00_g22770 Coffea canephora HOM05D003884 ORTHO05D004482 1.3e-51 206.8 117 80.3
Sc14g0008540 Simmondsia chinensis HOM05D003884 ORTHO05D004482 1.3e-51 206.8 122 77.0
Aa31LG1G4430 Aethionema arabicum HOM05D003884 ORTHO05D004482 1.7e-51 206.5 174 63.2
Carub.0001s0996 Capsella rubella HOM05D003884 ORTHO05D004482 1.7e-51 206.5 182 60.4
Oeu001657.1 Olea europaea HOM05D003884 ORTHO05D004482 2.9e-51 205.7 165 66.1
Cpa.g.sc5.349 Carica papaya HOM05D003884 ORTHO05D004482 3.8e-51 205.3 168 63.1
ClCG05G025040 Citrullus lanatus HOM05D003884 ORTHO05D004482 3.8e-51 205.3 178 61.2
CsaV3_5G031870 Cucumis sativus L. HOM05D003884 ORTHO05D004482 5.0e-51 204.9 173 60.1
Thhalv10008855m.g Eutrema salsugineum HOM05D003884 ORTHO05D004482 5.0e-51 204.9 177 60.5
A06p07300 Brassica napus HOM05D003884 ORTHO05D004482 6.5e-51 204.5 151 67.5
BraA06t23935Z Brassica rapa HOM05D003884 ORTHO05D004482 6.5e-51 204.5 151 67.5
MELO3C012025.2 Cucumis melo HOM05D003884 ORTHO05D004482 8.5e-51 204.1 178 60.7
Potri.010G094900 Populus trichocarpa HOM05D003884 ORTHO05D004482 8.5e-51 204.1 178 61.8
AL1G21330 Arabidopsis lyrata HOM05D003884 ORTHO05D004482 1.4e-50 203.4 174 59.8
Hma1.2p1_0160F.1_g070580 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 1.4e-50 203.4 114 82.5
CDE10G0847 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 2.5e-50 202.6 144 66.0
Actinidia08183 Actinidia chinensis HOM05D003884 ORTHO05D004482 3.2e-50 202.2 154 66.9
VMungo0251G2950 Vigna mungo HOM05D003884 ORTHO05D004482 3.2e-50 202.2 176 61.4
PGR119G0467 Punica granatum HOM05D003884 ORTHO05D004482 4.2e-50 201.8 158 64.6
BcaC05g24933 Brassica carinata HOM05D003884 ORTHO05D004482 5.5e-50 201.4 169 60.9
Ca_22779_v3 Cicer arietinum L. HOM05D003884 ORTHO05D004482 5.5e-50 201.4 166 60.8
GSVIVG01020172001 Vitis vinifera HOM05D003884 ORTHO05D004482 5.5e-50 201.4 181 59.7
Medtr8g063150 Medicago truncatula HOM05D003884 ORTHO05D004482 7.2e-50 201.1 161 62.7
CANSAT11G1742 Cannabis sativa HOM05D003884 ORTHO05D004482 1.6e-49 199.9 194 56.2
BcaC05g24871 Brassica carinata HOM05D003884 ORTHO05D004482 3.6e-49 198.7 151 66.2
C05p08810 Brassica napus HOM05D003884 ORTHO05D004482 3.6e-49 198.7 151 66.2
BolC5t29627H Brassica oleracea HOM05D003884 ORTHO05D004482 3.6e-49 198.7 151 66.2
Lj4g0002760 Lotus japonicus HOM05D003884 ORTHO05D004482 3.6e-49 198.7 169 60.9
Aqoxy3G03081 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 6.1e-49 198.0 172 63.4
Ah.03g132360 Amaranthus hybridus HOM05D003884 ORTHO05D004482 8.0e-49 197.6 187 57.2
MSTRG.622 Avicennia marina HOM05D003884 ORTHO05D004482 1.4e-48 196.8 111 78.4
CDE10G0415 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 1.4e-48 196.8 144 63.9
Solyc05g006110.3 Solanum lycopersicum HOM05D003884 ORTHO05D004482 1.8e-48 196.4 168 64.3
COL.COLO4_38097 Corchorus olitorius HOM05D003884 ORTHO05D004482 2.3e-48 196.1 172 59.9
Sabra10G0067200 Salix brachista HOM05D003884 ORTHO05D004482 2.3e-48 196.1 140 67.1
Migut.L01446 Erythranthe guttata HOM05D003884 ORTHO05D004482 3.0e-48 195.7 165 61.8
PGSC0003DMG400015599 Solanum tuberosum HOM05D003884 ORTHO05D004482 3.9e-48 195.3 140 69.3
Rhsim12G0124300 Rhododendron simsii HOM05D003884 ORTHO05D004482 5.2e-48 194.9 130 74.6
Phvul.003G055100 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 6.7e-48 194.5 172 59.9
PSO832G2848 Papaver somniferum HOM05D003884 ORTHO05D004482 8.8e-48 194.1 117 74.4
Sopen05g002130 Solanum pennellii HOM05D003884 ORTHO05D004482 1.5e-47 193.4 166 64.5
arahy.Tifrunner.gnm1.ann1.W247EX Arachis hypogaea HOM05D003884 ORTHO05D004482 2.0e-47 193.0 171 56.1
CAN.G1160.2 Capsicum annuum HOM05D003884 ORTHO05D004482 2.0e-47 193.0 169 59.2
DCAR_026554 Daucus carota HOM05D003884 ORTHO05D004482 2.0e-47 193.0 131 67.2
Nitab4.5_0000257g0220 Nicotiana tabacum HOM05D003884 ORTHO05D004482 2.6e-47 192.6 171 61.4
PSO063G2462 Papaver somniferum HOM05D003884 ORTHO05D004482 2.6e-47 192.6 188 53.2
arahy.Tifrunner.gnm1.ann1.FXM0G0 Arachis hypogaea HOM05D000677 ORTHO05D000727 5.7e-47 191.4 151 61.6
TWI36G1174 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 5.7e-47 191.4 146 63.7
Nitab4.5_0005722g0050 Nicotiana tabacum HOM05D003884 ORTHO05D004482 7.4e-47 191.0 168 58.9
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 1.3e-46 190.3 182 58.2
AUR62039407 Chenopodium quinoa HOM05D003884 ORTHO05D004482 1.3e-46 190.3 120 71.7
Haze_12138 Corylus avellana HOM05D003884 ORTHO05D004482 1.3e-46 190.3 182 58.2
SGA_v2.0_scaffold8G04247 Striga asiatica HOM05D003884 ORTHO05D004482 1.3e-46 190.3 127 70.9
CiPaw.05G146300 Carya illinoinensis HOM05D003884 ORTHO05D004482 1.7e-46 189.9 171 57.3
Psat4g126120 Pisum sativum HOM05D003884 ORTHO05D004482 1.7e-46 189.9 158 61.4
Lsat_1_v5_gn_3_49121 Lactuca sativa HOM05D003884 ORTHO05D004482 2.2e-46 189.5 185 54.6
Actinidia27769 Actinidia chinensis HOM05D003884 ORTHO05D004482 2.8e-46 189.1 153 63.4
QL03p062483 Quercus lobata HOM05D003884 ORTHO05D004482 8.2e-46 187.6 122 70.5
Peaxi162Scf00421g00711 Petunia axillaris HOM05D003884 ORTHO05D004482 4.1e-45 185.3 167 59.9
Lj3A1049T56 Lonicera japonica HOM05D003884 ORTHO05D004482 5.9e-44 181.4 183 54.1
unitig_62.g23678 Utricularia gibba HOM05D003884 ORTHO05D004482 7.7e-44 181.0 111 73.9
HPP92_010213 Vanilla planifolia HOM05D003884 ORTHO05D004482 6.5e-43 177.9 176 55.7
Lalb_Chr05g0228011 Lupinus albus HOM05D003884 ORTHO05D004482 4.7e-41 171.8 176 52.8
ECA238G2328 Erigeron canadensis HOM05D003884 ORTHO05D004482 6.1e-41 171.4 103 72.8
ATR1149G058 Amborella trichopoda HOM05D003884 ORTHO05D004482 1.5e-39 166.8 112 67.9
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 1.8e-37 159.8 136 59.6
vmacro16279 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 3.1e-37 159.1 184 51.1
SalBow2G1244 Salvia bowleyana HOM05D003884 ORTHO05D004482 1.2e-36 157.1 165 51.5
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 1.6e-36 156.8 128 57.8
Zm00001eb098980 Zea mays HOM05D003884 ORTHO05D004482 7.2e-34 147.9 120 56.7
Os09g0382400 Oryza sativa ssp. japonica HOM05D003884 ORTHO05D004482 4.0e-32 142.1 176 44.3
GSVIVG01020166001 Vitis vinifera HOM05D003884 ORTHO05D004482 1.3e-30 137.1 136 53.7
PSO161G0071 Papaver somniferum HOM05D003884 ORTHO05D004482 2.2e-30 136.3 132 50.8
CiPaw.05G149600 Carya illinoinensis HOM05D003884 ORTHO05D004482 2.8e-30 136.0 108 56.5
HPP92_017073 Vanilla planifolia HOM05D003884 ORTHO05D004482 2.8e-30 136.0 142 50.0
TAR622G0672 Trochodendron aralioides HOM05D003884 ORTHO05D004482 6.3e-30 134.8 171 47.4
Nitab4.5_0004536g0010 Nicotiana tabacum HOM05D003884 ORTHO05D004482 8.3e-30 134.4 149 49.0
CSS0028392 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 1.1e-29 134.0 105 59.0
Gorai.009G344500 Gossypium raimondii HOM05D003884 ORTHO05D004482 1.8e-29 133.3 108 54.6
Dinv24898 Davidia involucrata HOM05D003884 ORTHO05D004482 2.4e-29 132.9 136 50.0
COL.COLO4_37908 Corchorus olitorius HOM05D003884 ORTHO05D004482 4.1e-29 132.1 166 46.4
PSO478G1563 Papaver somniferum HOM05D003884 ORTHO05D004482 4.1e-29 132.1 172 41.3
MSTRG.2381 Avicennia marina HOM05D003884 ORTHO05D004482 7.0e-29 131.3 105 53.3
Nitab4.5_0004033g0080 Nicotiana tabacum HOM05D003884 ORTHO05D004482 9.1e-29 131.0 143 46.9
MD16G1087000 Malus domestica HOM05D003884 ORTHO05D004482 1.2e-28 130.6 62 91.9
Manes.01G197000 Manihot esculenta HOM05D003884 ORTHO05D004482 1.2e-28 130.6 108 53.7
Gohir.D05G321100 Gossypium hirsutum HOM05D003884 ORTHO05D004482 2.0e-28 129.8 103 56.3
Psat4g125600 Pisum sativum HOM05D003884 ORTHO05D004482 2.0e-28 129.8 105 55.2
Oeu001665.1 Olea europaea HOM05D003884 ORTHO05D004482 3.5e-28 129.0 105 54.3
Aqoxy3G00923 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 1.0e-27 127.5 104 55.8
Sed0027154 Sechium edule HOM05D003884 ORTHO05D004482 1.0e-27 127.5 153 45.1
PGSC0003DMG400015596 Solanum tuberosum HOM05D003884 ORTHO05D004482 1.0e-27 127.5 137 48.2
Gohir.A05G318900 Gossypium hirsutum HOM05D003884 ORTHO05D004482 1.3e-27 127.1 134 49.3
Thecc.02G243200 Theobroma cacao HOM05D003884 ORTHO05D004482 1.7e-27 126.7 167 44.9
TWI75G1604 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 1.7e-27 126.7 138 47.1
Hma1.2p1_1017F.1_g248220 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 3.8e-27 125.6 105 55.2
MBI15_g14835_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 3.8e-27 125.6 60 88.3
SGA_v2.0_scaffold87G27003 Striga asiatica HOM05D003884 ORTHO05D004482 3.8e-27 125.6 104 55.8
Haze_12163 Corylus avellana HOM05D003884 ORTHO05D004482 8.6e-27 124.4 123 48.8
Duzib248G1263 Durio zibethinus HOM05D003884 ORTHO05D004482 8.6e-27 124.4 108 50.9
Medtr8g063190 Medicago truncatula HOM05D003884 ORTHO05D004482 8.6e-27 124.4 135 46.7
Migut.E00143 Erythranthe guttata HOM05D003884 ORTHO05D004482 1.5e-26 123.6 105 49.5
MBI15_g16616_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 2.5e-26 122.9 94 60.6
Sopen05g002070 Solanum pennellii HOM05D003884 ORTHO05D004482 3.3e-26 122.5 145 45.5
Glyma.08G290900 Glycine max HOM05D003884 ORTHO05D004482 4.2e-26 122.1 103 53.4
ATR1149G127 Amborella trichopoda HOM05D003884 ORTHO05D004482 5.5e-26 121.7 142 49.3
Cpa.g.sc5.356 Carica papaya HOM05D003884 ORTHO05D004482 7.2e-26 121.3 168 44.0
CsaV3_5G031830 Cucumis sativus L. HOM05D003884 ORTHO05D004482 7.2e-26 121.3 106 49.1
FvH4_4g34960 Fragaria vesca HOM05D003884 ORTHO05D004482 1.6e-25 120.2 105 52.4
FAN12G0178 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.6e-25 120.2 105 52.4
Prupe.1G258900 Prunus persica HOM05D003884 ORTHO05D004482 3.6e-25 119.0 135 43.7
Rhsim12G0124000 Rhododendron simsii HOM05D003884 ORTHO05D004482 6.1e-25 118.2 167 43.1
ClCG05G025070 Citrullus lanatus HOM05D003884 ORTHO05D004482 1.0e-24 117.5 191 36.1
FAN17G0777 Fragaria x ananassa HOM05D003884 ORTHO05D004482 3.0e-24 115.9 176 39.8
Lsat_1_v5_gn_3_49081 Lactuca sativa HOM05D003884 ORTHO05D004482 4.0e-24 115.5 165 43.6
MBI15_g45678_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 5.2e-24 115.2 102 55.9
Lj4g0012912 Lotus japonicus HOM05D003884 ORTHO05D004482 6.8e-24 114.8 126 45.2
FAN22G1839 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.0e-23 113.2 165 42.4
AUR62026600 Chenopodium quinoa HOM05D003884 ORTHO05D004482 4.4e-23 112.1 125 44.0
CDE05G1492 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 5.7e-23 111.7 155 41.9
FAN07G1775 Fragaria x ananassa HOM05D003884 ORTHO05D004482 5.7e-23 111.7 170 40.0
Peaxi162Scf00421g00615 Petunia axillaris HOM05D003884 ORTHO05D004482 8.3e-22 107.8 164 40.9
VMungo0251G0159 Vigna mungo HOM05D003884 ORTHO05D004482 8.3e-22 107.8 181 36.5
MELO3C012022.2 Cucumis melo HOM05D003884 ORTHO05D004482 1.1e-21 107.5 177 35.0
ECA246G1403 Erigeron canadensis HOM05D003884 ORTHO05D004482 1.4e-21 107.1 106 46.2
Phvul.003G054800 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 1.8e-21 106.7 157 40.8
Atru.chr11.1968 Acer truncatum HOM05D003884 ORTHO05D004482 2.4e-21 106.3 88 55.7
Medtr2g099400 Medicago truncatula HOM05D000001 ORTHO05D011365 5.4e-21 105.1 61 73.8
vmacro16296 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 7.0e-21 104.8 131 48.9
Hund25320 Selenicereus undatus HOM05D003884 ORTHO05D004482 5.9e-20 101.7 169 36.7
TPR.G35986 Trifolium pratense HOM05D003884 ORTHO05D004482 7.8e-20 101.3 59 71.2
CDE10G0535 Ceratophyllum demersum HOM05D007469 ORTHO05D003360 3.8e-19 99.0 184 37.0
arahy.Tifrunner.gnm1.ann1.9N1GR3 Arachis hypogaea HOM05D003884 ORTHO05D004482 5.0e-19 98.6 137 41.6
arahy.Tifrunner.gnm1.ann1.QD9WVF Arachis hypogaea HOM05D003884 ORTHO05D004482 1.9e-18 96.7 137 41.6
QL03p062328 Quercus lobata HOM05D003884 ORTHO05D004482 2.5e-18 96.3 253 30.4
EL10Ac6g13616 Beta vulgaris HOM05D000625 ORTHO05D000467 8.0e-17 91.3 91 46.2
TPR.G40428 Trifolium pratense HOM05D003884 ORTHO05D004482 4.0e-16 89.0 59 62.7
PGR102G1298 Punica granatum HOM05D003884 ORTHO05D004482 8.9e-16 87.8 139 41.0
QL03p062368 Quercus lobata HOM05D003884 ORTHO05D004482 1.2e-15 87.4 276 27.9
TPR.G39492 Trifolium pratense HOM05D003884 ORTHO05D004482 2.6e-15 86.3 104 51.0
CSS0008150 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 1.6e-12 77.0 78 47.4
AagrBONN_evm.TU.Sc2ySwM_368.3177 Anthoceros agrestis HOM05D003884 ORTHO05D004482 5.6e-10 68.6 96 36.5
Mapoly0021s0016 Marchantia polymorpha HOM05D003884 ORTHO05D004482 8.0e-09 64.7 129 31.0
Medtr7g101780 Medicago truncatula HOM05D001475 ORTHO05D001525 1.7e-06 57.0 43 62.8


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