Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 8.6e-268 926.4 462 100.0
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.0e-264 915.2 462 99.4
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 2.3e-257 891.7 462 97.2
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 5.2e-249 864.0 462 94.6
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 2.4e-246 855.1 461 93.3
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 1.0e-236 823.2 464 87.3
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 1.8e-233 812.4 459 86.1
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 1.2e-232 809.7 466 86.1
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.3e-231 806.2 510 83.1
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 3.8e-231 804.7 459 85.2
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 1.9e-230 802.4 435 88.3
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 3.2e-230 801.6 467 84.8
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 9.3e-230 800.0 454 86.1
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 1.2e-229 799.7 460 86.3
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 1.6e-229 799.3 453 85.0
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 2.1e-229 798.9 466 84.5
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 1.8e-228 795.8 461 84.6
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 1.8e-228 795.8 463 84.0
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 2.3e-228 795.4 462 84.6
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 3.0e-228 795.0 468 83.8
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 6.7e-228 793.9 434 87.3
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 6.7e-228 793.9 433 87.8
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 1.5e-227 792.7 465 84.1
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 3.3e-227 791.6 432 87.7
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 4.3e-227 791.2 432 86.6
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 9.6e-227 790.0 462 81.6
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 9.6e-227 790.0 456 84.9
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 1.3e-226 789.6 433 87.1
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 1.3e-226 789.6 466 83.0
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 1.6e-226 789.3 434 87.1
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 2.1e-226 788.9 464 83.4
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 2.8e-226 788.5 463 84.0
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 1.4e-225 786.2 432 87.0
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 1.8e-225 785.8 438 85.8
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 4.0e-225 784.6 463 84.2
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 1.2e-224 783.1 453 83.0
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 1.5e-224 782.7 461 83.1
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 2.6e-224 781.9 465 81.7
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 3.4e-224 781.6 463 82.3
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 5.8e-224 780.8 463 81.6
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 1.7e-223 779.2 466 81.3
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 2.2e-223 778.9 457 82.7
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 2.2e-223 778.9 435 85.1
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 2.9e-223 778.5 463 81.2
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 4.9e-223 777.7 426 87.3
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 6.5e-223 777.3 427 86.2
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 6.5e-223 777.3 433 85.9
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 1.1e-222 776.5 452 83.0
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 1.1e-222 776.5 433 84.3
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 1.1e-222 776.5 463 81.9
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 1.4e-222 776.2 456 81.4
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 3.2e-222 775.0 425 87.5
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 4.2e-222 774.6 463 81.2
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 7.1e-222 773.9 463 81.0
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 1.2e-221 773.1 435 84.4
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 1.2e-221 773.1 466 80.5
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 2.1e-221 772.3 461 81.3
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 3.5e-221 771.5 457 81.4
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 4.6e-221 771.2 438 82.6
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 4.6e-221 771.2 452 82.1
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 7.9e-221 770.4 456 82.2
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 7.9e-221 770.4 452 81.9
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 2.3e-220 768.8 433 85.7
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 3.0e-220 768.5 432 83.8
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 6.7e-220 767.3 431 84.5
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 2.5e-219 765.4 434 83.2
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 9.6e-219 763.5 466 81.1
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 3.7e-218 761.5 431 84.2
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 8.2e-218 760.4 416 86.3
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 5.8e-216 754.2 434 85.0
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 7.2e-214 747.3 482 75.1
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 9.3e-214 746.9 424 83.7
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 2.1e-213 745.7 417 83.9
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 6.7e-212 740.7 482 78.4
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.1e-211 740.0 456 79.2
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 3.7e-210 734.9 423 81.1
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 4.1e-209 731.5 402 87.8
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 9.0e-209 730.3 430 81.4
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 2.0e-208 729.2 428 80.1
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.2e-205 719.9 433 78.8
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 3.6e-205 718.4 495 73.9
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 6.7e-204 714.1 426 80.5
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 1.5e-203 713.0 422 78.9
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 3.3e-203 711.8 419 79.2
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 4.8e-202 708.0 402 83.8
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 1.8e-201 706.1 419 78.8
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 2.9e-199 698.7 451 77.8
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 4.2e-198 694.9 405 86.7
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 1.2e-197 693.3 383 88.0
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.0e-196 690.3 436 77.1
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 1.1e-195 686.8 489 71.2
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 2.7e-189 665.6 524 67.0
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 1.4e-188 663.3 392 82.1
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 3.0e-188 662.1 462 71.4
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 1.4e-185 653.3 388 81.4
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 2.7e-184 649.0 422 71.6
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 2.1e-181 639.4 358 86.3
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 4.2e-174 615.1 435 71.3
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 9.8e-171 604.0 426 67.6
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 2.7e-168 595.9 422 67.1
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 2.9e-167 592.4 378 78.6
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 3.4e-163 578.9 496 62.5
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 4.7e-141 505.4 272 89.0
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 3.1e-140 502.7 273 87.5
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 5.4e-137 491.9 459 57.5
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 5.4e-137 491.9 277 85.9
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 3.0e-135 486.1 375 63.2
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 1.5e-118 430.6 260 83.5
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 7.7e-67 258.8 189 68.8
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 1.1e-65 255.0 147 82.3
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 2.7e-59 233.8 147 74.8
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 1.1e-41 175.3 97 81.4
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 6.0e-27 126.3 79 72.2
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 3.0e-26 124.0 70 84.3
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 7.1e-20 102.8 57 82.5
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 1.2e-16 92.0 49 87.8
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 1.0e-10 72.4 49 69.4
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 1.0e-10 72.4 42 78.6
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 6.6e-10 69.7 42 73.8
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 2.4e-07 61.2 40 75.0


User provided reference genes

Program Settings