Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN12G0063 Fragaria x ananassa HOM05D005595 ORTHO05D006962 1.3e-127 459.9 226 100.0
FAN12G0306 Fragaria x ananassa HOM05D005595 ORTHO05D006962 7.4e-86 321.2 220 77.7
FvH4_4g11850 Fragaria vesca HOM05D005595 ORTHO05D006962 7.6e-75 284.6 250 64.4
RcHm_v2.0_Chr4g0409361 Rosa chinensis HOM05D005595 ORTHO05D006962 7.0e-52 208.4 200 59.0
RcHm_v2.0_Chr2g0174761 Rosa chinensis HOM05D005595 ORTHO05D006962 2.6e-51 206.5 212 56.6
Ca_16345_v3 Cicer arietinum L. HOM05D005595 ORTHO05D006962 1.0e-50 204.5 212 54.7
FvH4_6g53020 Fragaria vesca HOM05D005595 ORTHO05D006962 1.7e-50 203.8 212 55.7
Duzib041G0186 Durio zibethinus HOM05D005595 ORTHO05D006962 2.2e-50 203.4 212 55.2
Phvul.010G007100 Phaseolus vulgaris HOM05D005595 ORTHO05D006962 2.9e-50 203.0 212 54.7
CANSAT64G2788 Cannabis sativa HOM05D005595 ORTHO05D006962 3.8e-50 202.6 212 54.7
Dinv33365 Davidia involucrata HOM05D005595 ORTHO05D006962 3.8e-50 202.6 212 55.2
Glyma.19G075200 Glycine max HOM05D005595 ORTHO05D006962 3.8e-50 202.6 212 55.2
Glyma.19G180500 Glycine max HOM05D005595 ORTHO05D006962 3.8e-50 202.6 212 55.2
ECA232G1699 Erigeron canadensis HOM05D005595 ORTHO05D006962 6.5e-50 201.8 233 49.4
Glyma.20G058200 Glycine max HOM05D005595 ORTHO05D006962 6.5e-50 201.8 200 56.5
FAN05G0361 Fragaria x ananassa HOM05D005595 ORTHO05D006962 1.1e-49 201.1 212 55.2
HanXRQChr08g0233931 Helianthus annuus HOM05D005595 ORTHO05D006962 1.1e-49 201.1 227 52.9
Sed0017898 Sechium edule HOM05D005595 ORTHO05D006962 1.5e-49 200.7 212 53.8
Ciclev10016747m.g Citrus clementina HOM05D005595 ORTHO05D006962 1.9e-49 200.3 227 52.0
Hund25939 Selenicereus undatus HOM05D005595 ORTHO05D006962 1.9e-49 200.3 227 52.4
Gohir.D05G248400 Gossypium hirsutum HOM05D005595 ORTHO05D006962 2.5e-49 199.9 213 54.0
Gorai.009G259400 Gossypium raimondii HOM05D005595 ORTHO05D006962 2.5e-49 199.9 213 54.0
Dinv37839 Davidia involucrata HOM05D005595 ORTHO05D006962 3.2e-49 199.5 212 54.2
Psat5g104400 Pisum sativum HOM05D005595 ORTHO05D006962 3.2e-49 199.5 227 50.7
Prupe.3G148400 Prunus persica HOM05D005595 ORTHO05D006962 3.2e-49 199.5 212 54.7
Haze_14834 Corylus avellana HOM05D005595 ORTHO05D006962 4.2e-49 199.1 209 54.1
Potri.017G066000 Populus trichocarpa HOM05D005595 ORTHO05D006962 4.2e-49 199.1 212 53.8
Cc07_g00580 Coffea canephora HOM05D005595 ORTHO05D006962 5.5e-49 198.7 212 52.8
Lalb_Chr05g0227671 Lupinus albus HOM05D005595 ORTHO05D006962 5.5e-49 198.7 226 51.8
PGR083G2585 Punica granatum HOM05D005595 ORTHO05D006962 5.5e-49 198.7 212 53.8
EL10Ac8g19198 Beta vulgaris HOM05D005595 ORTHO05D006962 7.2e-49 198.4 212 54.2
AUR62029058 Chenopodium quinoa HOM05D005595 ORTHO05D006962 1.2e-48 197.6 232 50.9
AUR62034098 Chenopodium quinoa HOM05D005595 ORTHO05D006962 1.2e-48 197.6 232 50.9
Eucgr.J02309 Eucalyptus grandis HOM05D005595 ORTHO05D006962 1.2e-48 197.6 200 55.0
Manes.17G105900 Manihot esculenta HOM05D005595 ORTHO05D006962 1.2e-48 197.6 231 50.6
Oeu035209.1 Olea europaea HOM05D005595 ORTHO05D006962 1.2e-48 197.6 212 53.3
Gohir.A05G246900 Gossypium hirsutum HOM05D005595 ORTHO05D006962 1.6e-48 197.2 213 53.5
Thecc.08G161400 Theobroma cacao HOM05D005595 ORTHO05D006962 1.6e-48 197.2 212 53.8
SGA_v2.0_scaffold47G17577 Striga asiatica HOM05D005595 ORTHO05D006962 2.1e-48 196.8 233 48.9
TWI59G1157 Tripterygium wilfordii HOM05D005595 ORTHO05D006962 2.1e-48 196.8 212 53.3
arahy.Tifrunner.gnm1.ann1.AY8PV2 Arachis hypogaea HOM05D005595 ORTHO05D006962 2.7e-48 196.4 252 47.2
VMungo1127G0708 Vigna mungo HOM05D005595 ORTHO05D006962 2.7e-48 196.4 212 51.4
Duzib093G1178 Durio zibethinus HOM05D005595 ORTHO05D006962 3.6e-48 196.1 200 54.5
Nitab4.5_0000401g0090 Nicotiana tabacum HOM05D005595 ORTHO05D006962 3.6e-48 196.1 227 51.1
Nitab4.5_0006964g0020 Nicotiana tabacum HOM05D005595 ORTHO05D006962 3.6e-48 196.1 227 51.1
TWI23G0028 Tripterygium wilfordii HOM05D005595 ORTHO05D006962 3.6e-48 196.1 212 53.8
Solyc09g092090.4 Solanum lycopersicum HOM05D005595 ORTHO05D006962 4.7e-48 195.7 212 53.8
Sopen09g034960 Solanum pennellii HOM05D005595 ORTHO05D006962 4.7e-48 195.7 212 53.8
CSS0001891 Camellia sinensis var. sinensis HOM05D005595 ORTHO05D006962 6.1e-48 195.3 221 52.9
CAN.G1333.9 Capsicum annuum HOM05D005595 ORTHO05D006962 6.1e-48 195.3 212 53.3
CiPaw.03G052400 Carya illinoinensis HOM05D005595 ORTHO05D006962 6.1e-48 195.3 212 52.4
Ca_04418_v3 Cicer arietinum L. HOM05D005595 ORTHO05D006962 6.1e-48 195.3 212 52.4
Peaxi162Scf00753g00428 Petunia axillaris HOM05D005595 ORTHO05D006962 6.1e-48 195.3 227 50.7
A03p32350 Brassica napus HOM05D005595 ORTHO05D006962 8.0e-48 194.9 205 55.1
C03p39400 Brassica napus HOM05D005595 ORTHO05D006962 8.0e-48 194.9 205 55.1
BraA03t12405Z Brassica rapa HOM05D005595 ORTHO05D006962 8.0e-48 194.9 205 55.1
arahy.Tifrunner.gnm1.ann1.HCN1MH Arachis hypogaea HOM05D005595 ORTHO05D006962 1.0e-47 194.5 250 46.8
Atru.chr6.2514 Acer truncatum HOM05D005595 ORTHO05D006962 1.4e-47 194.1 236 48.3
CsaV3_6G042550 Cucumis sativus L. HOM05D005595 ORTHO05D006962 1.8e-47 193.7 200 54.5
LjContig00102g0027903 Lotus japonicus HOM05D005595 ORTHO05D006962 1.8e-47 193.7 212 52.4
Medtr3g082760 Medicago truncatula HOM05D005595 ORTHO05D006962 1.8e-47 193.7 212 51.4
Peaxi162Scf00047g00333 Petunia axillaris HOM05D005595 ORTHO05D006962 1.8e-47 193.7 227 50.2
BcaNung05589 Brassica carinata HOM05D005595 ORTHO05D006962 2.3e-47 193.4 212 53.8
Lj3A195G12 Lonicera japonica HOM05D005595 ORTHO05D006962 2.3e-47 193.4 239 49.4
MBI10_g24386_MAGBIO Magnolia biondii HOM05D005595 ORTHO05D006962 2.3e-47 193.4 193 54.9
Oeu013953.1 Olea europaea HOM05D005595 ORTHO05D006962 2.3e-47 193.4 227 50.2
Aqoxy5G03493 Aquilegia oxysepala HOM05D005595 ORTHO05D006962 3.0e-47 193.0 213 53.5
Lsat_1_v5_gn_4_185480 Lactuca sativa HOM05D005595 ORTHO05D006962 3.0e-47 193.0 212 52.4
THA.LOC104809576 Tarenaya hassleriana HOM05D005595 ORTHO05D006962 3.0e-47 193.0 232 49.1
SalBow1G1604 Salvia bowleyana HOM05D005595 ORTHO05D006962 4.0e-47 192.6 222 50.0
TAR625G0935 Trochodendron aralioides HOM05D005595 ORTHO05D006962 4.0e-47 192.6 212 53.3
TAR633G2523 Trochodendron aralioides HOM05D005595 ORTHO05D006962 4.0e-47 192.6 233 49.4
Ah.09g228170 Amaranthus hybridus HOM05D005595 ORTHO05D006962 5.2e-47 192.2 212 52.8
TPR.G22469 Trifolium pratense HOM05D000829 ORTHO05D006962 5.2e-47 192.2 212 51.9
GSVIVG01001821001 Vitis vinifera HOM05D005595 ORTHO05D006962 5.2e-47 192.2 212 53.3
MD17G1015300 Malus domestica HOM05D005595 ORTHO05D006962 6.7e-47 191.8 200 53.0
Potri.001G334000 Populus trichocarpa HOM05D005595 ORTHO05D006962 6.7e-47 191.8 212 52.4
QL02p072441 Quercus lobata HOM05D005595 ORTHO05D006962 6.7e-47 191.8 209 53.6
Sp3g00270 Schrenkiella parvula HOM05D005595 ORTHO05D006962 6.7e-47 191.8 193 54.4
Aa31LG5G10920 Aethionema arabicum HOM05D005595 ORTHO05D006962 1.2e-46 191.0 200 54.5
Nn3g20286 Nelumbo nucifera HOM05D005595 ORTHO05D006962 1.2e-46 191.0 212 52.4
SEGI_22376 Sequoiadendron giganteum HOM05D005595 ORTHO05D006962 1.2e-46 191.0 213 51.6
Nn1g08708 Nelumbo nucifera HOM05D005595 ORTHO05D006962 1.5e-46 190.7 212 52.4
PGSC0003DMG400026415 Solanum tuberosum HOM05D005595 ORTHO05D006962 1.5e-46 190.7 212 52.8
THA.LOC104813780 Tarenaya hassleriana HOM05D005595 ORTHO05D006962 2.6e-46 189.9 227 49.8
Thecc.04G030300 Theobroma cacao HOM05D005595 ORTHO05D006962 3.3e-46 189.5 212 51.9
vmacro18324 Vaccinium macrocarpon HOM05D005595 ORTHO05D006962 3.3e-46 189.5 246 48.0
AL3G10340 Arabidopsis lyrata HOM05D005595 ORTHO05D006962 5.7e-46 188.7 200 53.0
AT3G01790 Arabidopsis thaliana HOM05D005595 ORTHO05D006962 7.5e-46 188.3 200 53.0
MSTRG.15560 Avicennia marina HOM05D005595 ORTHO05D006962 7.5e-46 188.3 212 50.9
MELO3C007496.2 Cucumis melo HOM05D005595 ORTHO05D006962 9.7e-46 188.0 200 53.0
SEGI_32901 Sequoiadendron giganteum HOM05D005595 ORTHO05D006962 9.7e-46 188.0 215 49.8
Thhalv10021543m.g Eutrema salsugineum HOM05D005595 ORTHO05D006962 1.3e-45 187.6 227 49.3
Carub.0003s0027 Capsella rubella HOM05D005595 ORTHO05D006962 1.7e-45 187.2 200 52.5
HPP92_011547 Vanilla planifolia HOM05D005595 ORTHO05D006962 1.7e-45 187.2 212 51.4
SGA_v2.0_scaffold154G37161 Striga asiatica HOM05D005595 ORTHO05D006962 3.7e-45 186.0 217 52.5
FAN09G4421 Fragaria x ananassa HOM05D005595 ORTHO05D006962 1.1e-44 184.5 212 51.4
CARHR075140 Cardamine hirsuta HOM05D005595 ORTHO05D006962 3.1e-44 183.0 212 49.5
Migut.G01349 Erythranthe guttata HOM05D005595 ORTHO05D006962 5.3e-44 182.2 233 45.5
PSO063G5361 Papaver somniferum HOM05D005595 ORTHO05D006962 7.0e-44 181.8 213 49.8
Os08g0162033 Oryza sativa ssp. japonica HOM05D005595 ORTHO05D006962 1.2e-43 181.0 229 48.0
Os05g0243300 Oryza sativa ssp. japonica HOM05D005595 ORTHO05D006962 1.3e-42 177.6 229 47.6
Zm00001eb365700 Zea mays HOM05D005595 ORTHO05D006962 1.3e-42 177.6 212 50.5
COL.COLO4_13732 Corchorus olitorius HOM05D005595 ORTHO05D006962 3.8e-42 176.0 215 50.2
PSO782G0616 Papaver somniferum HOM05D005595 ORTHO05D006962 1.5e-41 174.1 213 48.8
ATR0723G078 Amborella trichopoda HOM05D005595 ORTHO05D006962 2.5e-41 173.3 218 46.3
Peaxi162Scf00318g00721 Petunia axillaris HOM05D005595 ORTHO05D006962 1.4e-39 167.5 216 48.6
SEGI_06133 Sequoiadendron giganteum HOM05D005595 ORTHO05D006962 8.8e-39 164.9 121 68.6
FAN14G1531 Fragaria x ananassa HOM05D005595 ORTHO05D006962 3.4e-38 162.9 100 82.0
Sc18g0002160 Simmondsia chinensis HOM05D005595 ORTHO05D006962 4.4e-38 162.5 106 76.4
CSS0048340 Camellia sinensis var. sinensis HOM05D005595 ORTHO05D006962 2.4e-36 156.8 205 48.8
CSS0030746 Camellia sinensis var. sinensis HOM05D005595 ORTHO05D006962 4.1e-36 156.0 179 50.8
CiPaw.04G034600 Carya illinoinensis HOM05D005595 ORTHO05D006962 7.0e-36 155.2 106 74.5
SHI03897 Sapria himalayana HOM05D005595 ORTHO05D006962 9.1e-36 154.8 187 49.7
SalBow7G1090 Salvia bowleyana HOM05D005595 ORTHO05D006962 4.5e-35 152.5 219 45.2
Mapoly0030s0026 Marchantia polymorpha HOM05D005595 ORTHO05D006962 4.2e-33 146.0 202 42.6
AagrBONN_evm.TU.Sc2ySwM_344.3616 Anthoceros agrestis HOM05D005595 ORTHO05D006962 1.0e-31 141.4 212 41.0
Pp3c1_3220 Physcomitrium patens HOM05D005595 ORTHO05D006962 3.7e-29 132.9 212 38.7
CBR_g2974 Chara braunii HOM05D005595 ORTHO05D006962 4.1e-28 129.4 208 38.5
Os05g0243100 Oryza sativa ssp. japonica HOM05D005595 ORTHO05D006962 2.9e-26 123.2 73 76.7
HanXRQChr17g0550171 Helianthus annuus HOM05D005595 ORTHO05D006962 3.8e-26 122.9 197 41.1
Zm00001eb144650 Zea mays HOM05D005595 ORTHO05D006962 1.5e-25 120.9 221 40.3
Sabra17G0059400 Salix brachista HOM05D005595 ORTHO05D006962 1.1e-20 104.8 180 38.3
Sabra17G0061400 Salix brachista HOM05D005595 ORTHO05D006962 1.1e-20 104.8 180 38.3
CDE05G0827 Ceratophyllum demersum HOM05D005595 ORTHO05D006962 2.4e-20 103.6 106 55.7
AagrBONN_evm.TU.Sc2ySwM_344.1421 Anthoceros agrestis HOM05D005595 ORTHO05D006962 4.1e-20 102.8 74 64.9
SMO117G0155 Selaginella moellendorffii HOM05D005595 ORTHO05D006962 1.0e-18 98.2 201 32.8
Os05g0243200 Oryza sativa ssp. japonica HOM05D005595 ORTHO05D006962 5.0e-18 95.9 58 75.9
Cre09.g405200 Chlamydomonas reinhardtii HOM05D005595 ORTHO05D006962 1.5e-17 94.4 208 33.2
MCO07G681 Micromonas commoda HOM05D005595 ORTHO05D006962 7.3e-17 92.0 95 44.2
TAR629G0540 Trochodendron aralioides HOM05D005595 ORTHO05D006962 1.2e-11 74.7 199 33.7
PRCOL_00005998 Prasinoderma coloniale HOM05D005595 ORTHO05D006962 3.5e-11 73.2 83 43.4
BolC3t16209H Brassica oleracea HOM05D005595 ORTHO05D006962 7.8e-11 72.0 127 39.4
unitig_0.g789 Utricularia gibba HOM05D005595 ORTHO05D006962 2.3e-10 70.5 147 34.7
ClCG01G016260 Citrullus lanatus HOM05D005595 ORTHO05D006962 1.5e-09 67.8 135 39.3
Aqoxy3G01736 Aquilegia oxysepala HOM05D005595 ORTHO05D001321 9.5e-09 65.1 48 60.4
Sed0014572 Sechium edule HOM05D002452 ORTHO05D006585 1.4e-07 61.2 58 48.3
CsaV3_4G032830 Cucumis sativus L. HOM05D002452 ORTHO05D006585 2.3e-07 60.5 58 48.3
FAN14G1625 Fragaria x ananassa HOM05D000664 ORTHO05D000491 2.3e-07 60.5 45 66.7
MELO3C025669.2 Cucumis melo HOM05D002452 ORTHO05D006585 3.1e-07 60.1 58 46.6
Sed0027576 Sechium edule HOM05D002452 ORTHO05D006585 8.9e-07 58.5 58 46.6
SEGI_16031 Sequoiadendron giganteum HOM05D002452 ORTHO05D006585 8.9e-07 58.5 58 44.8
CBR_g88534 Chara braunii HOM05D002452 ORTHO05D006585 1.2e-06 58.2 59 45.8
Cre06.g264350 Chlamydomonas reinhardtii HOM05D002452 ORTHO05D006585 1.2e-06 58.2 55 47.3
Cpa.g.sc77.57 Carica papaya HOM05D002452 ORTHO05D006585 1.5e-06 57.8 58 44.8
Gohir.A13G150900 Gossypium hirsutum HOM05D002452 ORTHO05D006585 1.5e-06 57.8 58 43.1
Gohir.D13G155000 Gossypium hirsutum HOM05D002452 ORTHO05D006585 1.5e-06 57.8 58 43.1
Gorai.013G175400 Gossypium raimondii HOM05D002452 ORTHO05D006585 1.5e-06 57.8 58 43.1
SMO116G0167 Selaginella moellendorffii HOM05D002452 ORTHO05D006585 1.5e-06 57.8 59 42.4
Thecc.07G130500 Theobroma cacao HOM05D002452 ORTHO05D006585 1.5e-06 57.8 58 43.1
ClCG11G017210 Citrullus lanatus HOM05D002452 ORTHO05D006585 2.6e-06 57.0 58 44.8
CiPaw.12G110400 Carya illinoinensis HOM05D002452 ORTHO05D006585 3.4e-06 56.6 58 43.1
Haze_09242 Corylus avellana HOM05D002452 ORTHO05D006585 3.4e-06 56.6 58 43.1
arahy.Tifrunner.gnm1.ann1.4IG6PJ Arachis hypogaea HOM05D002452 ORTHO05D006585 4.4e-06 56.2 58 46.6
CAN.G375.47 Capsicum annuum HOM05D002452 ORTHO05D006585 4.4e-06 56.2 58 43.1
Aqoxy1G01922 Aquilegia oxysepala HOM05D002452 ORTHO05D006585 5.8e-06 55.8 65 41.5
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 5.8e-06 55.8 44 61.4
CDE10G1050 Ceratophyllum demersum HOM05D002452 ORTHO05D006585 5.8e-06 55.8 58 44.8
Gohir.A01G048100 Gossypium hirsutum HOM05D002452 ORTHO05D006585 5.8e-06 55.8 58 44.8
GSVIVG01014101001 Vitis vinifera HOM05D002452 ORTHO05D006585 5.8e-06 55.8 58 41.4
ATR0800G053 Amborella trichopoda HOM05D002452 ORTHO05D006585 7.5e-06 55.5 58 41.4
CSS0019439 Camellia sinensis var. sinensis HOM05D002452 ORTHO05D006585 7.5e-06 55.5 58 41.4
Eucgr.F01365 Eucalyptus grandis HOM05D002452 ORTHO05D006585 7.5e-06 55.5 59 40.7
Manes.15G097600 Manihot esculenta HOM05D002452 ORTHO05D006585 7.5e-06 55.5 58 43.1
Medtr8g054450 Medicago truncatula HOM05D002452 ORTHO05D006585 7.5e-06 55.5 58 41.4
Peaxi162Scf00111g01331 Petunia axillaris HOM05D002452 ORTHO05D006585 7.5e-06 55.5 58 43.1
Phvul.011G168200 Phaseolus vulgaris HOM05D002452 ORTHO05D006585 7.5e-06 55.5 58 46.6
Psat4g140640 Pisum sativum HOM05D002452 ORTHO05D006585 7.5e-06 55.5 58 41.4
QL08p024701 Quercus lobata HOM05D002452 ORTHO05D006585 7.5e-06 55.5 58 43.1
Rhsim06G0211400 Rhododendron simsii HOM05D002452 ORTHO05D006585 7.5e-06 55.5 58 41.4
VMungo1127G1496 Vigna mungo HOM05D002452 ORTHO05D006585 7.5e-06 55.5 58 46.6
arahy.Tifrunner.gnm1.ann1.EQXZ2A Arachis hypogaea HOM05D002452 ORTHO05D006585 9.9e-06 55.1 58 44.8
Ca_07451_v3 Cicer arietinum L. HOM05D002452 ORTHO05D006585 9.9e-06 55.1 58 43.1
Glyma.15G209000 Glycine max HOM05D002452 ORTHO05D006585 9.9e-06 55.1 58 44.8
Gohir.D01G038800 Gossypium hirsutum HOM05D002452 ORTHO05D006585 9.9e-06 55.1 58 43.1
Gorai.002G048000 Gossypium raimondii HOM05D002452 ORTHO05D006585 9.9e-06 55.1 58 43.1
Hma1.2p1_0050F.1_g028830 Hydrangea macrophylla HOM05D002452 ORTHO05D006585 9.9e-06 55.1 59 42.4
Lsat_1_v5_gn_9_100460 Lactuca sativa HOM05D002452 ORTHO05D006585 9.9e-06 55.1 58 41.4
Potri.001G384600 Populus trichocarpa HOM05D002452 ORTHO05D006585 9.9e-06 55.1 58 41.4
Sabra16G0253200 Salix brachista HOM05D002452 ORTHO05D006585 9.9e-06 55.1 58 41.4
vmacro11967 Vaccinium macrocarpon HOM05D002452 ORTHO05D006585 9.9e-06 55.1 58 43.1


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