Gene: AT3G01790

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G01790
  • Transcript Identifier AT3G01790.2
  • Gene Type Coding gene
  • Location Chr3 : 283880-285583 : negative

Gene Family Information

  • ID HOM05D005595
  • #Genes/#Species 137/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G01790.2
  • uniprot Q7XA68

Descriptions

  • Description Ribosomal protein L13 family protein
  • Computational description Ribosomal protein L13 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L13, bacterial-type (InterPro:IPR005823), Ribosomal protein L13 (InterPro:IPR005822); BEST Arabidopsis thaliana protein match is: Ribosomal protein L13 family protein (TAIR:AT1G78630.1); Has 7701 Blast hits to 7701 proteins in 2675 species: Archae - 7; Bacteria - 5222; Metazoa - 123; Fungi - 136; Plants - 125; Viruses - 0; Other Eukaryotes - 2088 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
Gene Ontologytranslation
GO:0006412
IEA
InterProtranslation
GO:0017148
IBA
Gene Ontologynegative regulation of translation1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IBA
IEA
Gene Ontologystructural constituent of ribosome1
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003729
IBA
Gene OntologymRNA binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISM
Gene Ontologymitochondrion
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005762
IBA
Gene Ontologymitochondrial large ribosomal subunit1
GO:0005840
IEA
GOA Databaseribosome
GO:0005840
IBA
Gene Ontologyribosome1
GO:0005840
IEA
InterProribosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036899 Ribosomal protein L13 superfamily
IPR005823 Ribosomal protein L13, bacterial-type
IPR005822 Ribosomal protein L13
Mapman id Description
17.7.1.1.12 Protein biosynthesis.organelle machinery.mitochondrial ribosome.large ribosomal subunit proteome.component mtRPL13