Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G3775 Fragaria x ananassa HOM05D012161 ORTHO05D002431 8.7e-44 179.9 88 100.0
FAN21G0185 Fragaria x ananassa HOM05D002917 ORTHO05D002431 1.8e-33 145.6 79 93.7
FvH4_3g27760 Fragaria vesca HOM05D012161 ORTHO05D002431 5.3e-33 144.1 71 98.6
RcHm_v2.0_Chr5g0050361 Rosa chinensis HOM05D012161 ORTHO05D002431 9.6e-27 123.2 79 81.0
Prupe.4G264200 Prunus persica HOM05D002917 ORTHO05D002431 2.8e-18 95.1 77 66.2
MD03G1164700 Malus domestica HOM05D012161 ORTHO05D002431 4.5e-16 87.8 62 71.0
Lalb_Chr04g0249281 Lupinus albus HOM05D009394 ORTHO05D002431 6.7e-12 73.9 64 60.9
CiPaw.13G149300 Carya illinoinensis HOM05D002917 ORTHO05D002431 2.0e-11 72.4 76 55.3
LjContig00564g0021896 Lotus japonicus HOM05D009394 ORTHO05D002431 3.3e-11 71.6 67 55.2
CsaV3_6G038900 Cucumis sativus L. HOM05D009394 ORTHO05D002431 4.3e-11 71.2 63 57.1
Psat2g020800 Pisum sativum HOM05D009394 ORTHO05D002431 4.3e-11 71.2 69 53.6
Haze_23253 Corylus avellana HOM05D002917 ORTHO05D002431 7.4e-11 70.5 54 66.7
Lj6g0020665 Lotus japonicus HOM05D009394 ORTHO05D002431 9.7e-11 70.1 67 50.7
CANSAT54G1823 Cannabis sativa HOM05D002917 ORTHO05D002431 1.3e-10 69.7 71 54.9
Lalb_Chr18g0049791 Lupinus albus HOM05D009394 ORTHO05D002431 1.7e-10 69.3 70 52.9
Medtr5g089290 Medicago truncatula HOM05D009394 ORTHO05D002431 2.2e-10 68.9 65 56.9
FAN25G0211 Fragaria x ananassa HOM05D012161 ORTHO05D002431 3.7e-10 68.2 38 89.5
Glyma.15G055400 Glycine max HOM05D009394 ORTHO05D002431 8.2e-10 67.0 61 59.0
Phvul.006G015600 Phaseolus vulgaris HOM05D009394 ORTHO05D002431 8.2e-10 67.0 59 55.9
Psat5g191400 Pisum sativum HOM05D009394 ORTHO05D002431 2.4e-09 65.5 62 54.8
Lalb_Chr10g0106201 Lupinus albus HOM05D009394 ORTHO05D002431 3.1e-09 65.1 65 53.8
PGR119G1093 Punica granatum HOM05D002917 ORTHO05D002431 3.1e-09 65.1 63 57.1
Carub.0006s1781 Capsella rubella HOM05D002917 ORTHO05D002431 1.5e-08 62.8 62 53.2
Glyma.07G232600 Glycine max HOM05D009394 ORTHO05D002431 1.5e-08 62.8 68 48.5
Dinv15024 Davidia involucrata HOM05D002917 ORTHO05D002431 2.0e-08 62.4 67 52.2
TPR.G16410 Trifolium pratense HOM05D009394 ORTHO05D002431 2.0e-08 62.4 65 55.4
TPR.G24378 Trifolium pratense HOM05D012161 ORTHO05D002431 2.0e-08 62.4 60 48.3
CSS0010926 Camellia sinensis var. sinensis HOM05D002917 ORTHO05D002431 4.5e-08 61.2 75 49.3
Potri.009G067600 Populus trichocarpa HOM05D002917 ORTHO05D002431 4.5e-08 61.2 60 56.7
Sabra09G0050600 Salix brachista HOM05D002917 ORTHO05D002431 4.5e-08 61.2 58 58.6
AL6G30970 Arabidopsis lyrata HOM05D002917 ORTHO05D002431 5.9e-08 60.8 62 51.6
Nn7g36760 Nelumbo nucifera HOM05D002917 ORTHO05D002431 7.7e-08 60.5 54 64.8
AT5G19473 Arabidopsis thaliana HOM05D002917 ORTHO05D002431 1.0e-07 60.1 58 51.7
MBI19_g20793_MAGBIO Magnolia biondii HOM05D002917 ORTHO05D002431 2.2e-07 58.9 56 58.9
QL01p016834 Quercus lobata HOM05D012161 ORTHO05D002431 2.2e-07 58.9 68 47.1
CSS0039673 Camellia sinensis var. sinensis HOM05D002917 ORTHO05D002431 2.9e-07 58.5 61 52.5
Eucgr.J00684 Eucalyptus grandis HOM05D002917 ORTHO05D002431 2.9e-07 58.5 66 56.1
Medtr3g436750 Medicago truncatula HOM05D009394 ORTHO05D002431 2.9e-07 58.5 61 50.8
Aqoxy1G00393 Aquilegia oxysepala HOM05D002917 ORTHO05D002431 3.8e-07 58.2 71 49.3
Potri.001G273300 Populus trichocarpa HOM05D002917 ORTHO05D002431 3.8e-07 58.2 70 48.6
Rhsim13G0207800 Rhododendron simsii HOM05D002917 ORTHO05D002431 3.8e-07 58.2 63 50.8
Manes.02G136400 Manihot esculenta HOM05D002917 ORTHO05D002431 5.0e-07 57.8 64 53.1
Sabra16G0168400 Salix brachista HOM05D002917 ORTHO05D002431 5.0e-07 57.8 57 54.4
Thecc.09G247400 Theobroma cacao HOM05D002917 ORTHO05D002431 5.0e-07 57.8 53 60.4
BcaB01g04859 Brassica carinata HOM05D002917 ORTHO05D002431 6.5e-07 57.4 57 54.4
CSS0017424 Camellia sinensis var. sinensis HOM05D002917 ORTHO05D002431 6.5e-07 57.4 79 45.6
Cpa.g.sc34.178 Carica papaya HOM05D009394 ORTHO05D002431 6.5e-07 57.4 55 58.2
Oeu032569.1 Olea europaea HOM05D002917 ORTHO05D002431 6.5e-07 57.4 53 56.6
CARHR193450 Cardamine hirsuta HOM05D002917 ORTHO05D002431 8.5e-07 57.0 57 50.9
Nitab4.5_0004840g0020 Nicotiana tabacum HOM05D002917 ORTHO05D002431 8.5e-07 57.0 73 50.7
Nitab4.5_0007284g0050 Nicotiana tabacum HOM05D002917 ORTHO05D002431 8.5e-07 57.0 73 50.7
arahy.Tifrunner.gnm1.ann1.7K9SF4 Arachis hypogaea HOM05D033084 ORTHO05D002431 1.1e-06 56.6 50 52.0
Phvul.008G202100 Phaseolus vulgaris HOM05D009394 ORTHO05D002431 1.1e-06 56.6 76 44.7
arahy.Tifrunner.gnm1.ann1.48WV5B Arachis hypogaea HOM05D033084 ORTHO05D002431 1.9e-06 55.8 50 52.0
BcaB01g05147 Brassica carinata HOM05D002917 ORTHO05D002431 1.9e-06 55.8 57 52.6
A03p09490 Brassica napus HOM05D002917 ORTHO05D002431 1.9e-06 55.8 57 52.6
C03p11070 Brassica napus HOM05D002917 ORTHO05D002431 1.9e-06 55.8 57 52.6
BolC3t13577H Brassica oleracea HOM05D002917 ORTHO05D002431 1.9e-06 55.8 57 52.6
BraA03t10267Z Brassica rapa HOM05D002917 ORTHO05D002431 1.9e-06 55.8 57 52.6
Ciclev10018107m.g Citrus clementina HOM05D002917 ORTHO05D002431 2.5e-06 55.5 67 49.3
Gohir.A09G110600 Gossypium hirsutum HOM05D009394 ORTHO05D002431 2.5e-06 55.5 76 43.4
Gohir.D09G107100 Gossypium hirsutum HOM05D009394 ORTHO05D002431 2.5e-06 55.5 76 43.4
Gorai.006G124700 Gossypium raimondii HOM05D009394 ORTHO05D002431 2.5e-06 55.5 76 43.4
GSVIVG01037326001 Vitis vinifera HOM05D002917 ORTHO05D002431 2.5e-06 55.5 67 47.8
Sopen11g024730 Solanum pennellii HOM05D012161 ORTHO05D002431 3.2e-06 55.1 62 51.6
arahy.Tifrunner.gnm1.ann1.NQ28YP Arachis hypogaea HOM05D009394 ORTHO05D002431 4.2e-06 54.7 66 51.5
A10p20240 Brassica napus HOM05D006224 ORTHO05D007691 4.2e-06 54.7 60 51.7
C09p56830 Brassica napus HOM05D002917 ORTHO05D002431 4.2e-06 54.7 60 51.7
BolC9t58537H Brassica oleracea HOM05D002917 ORTHO05D002431 4.2e-06 54.7 60 51.7
BraA10t44095Z Brassica rapa HOM05D006224 ORTHO05D007691 4.2e-06 54.7 60 51.7
Phvul.006G204500 Phaseolus vulgaris HOM05D009394 ORTHO05D002431 4.2e-06 54.7 48 58.3
Sc09g0001070 Simmondsia chinensis HOM05D009394 ORTHO05D002431 4.2e-06 54.7 64 50.0
Duzib170G0372 Durio zibethinus HOM05D006044 ORTHO05D007653 7.2e-06 53.9 67 49.3
Migut.N02378 Erythranthe guttata HOM05D009394 ORTHO05D002431 7.2e-06 53.9 60 48.3
Peaxi162Scf00359g00124 Petunia axillaris HOM05D002917 ORTHO05D002431 7.2e-06 53.9 72 48.6
arahy.Tifrunner.gnm1.ann1.S8RCCH Arachis hypogaea HOM05D009394 ORTHO05D002431 9.4e-06 53.5 66 50.0
Sp6g24940 Schrenkiella parvula HOM05D002917 ORTHO05D002431 9.4e-06 53.5 57 52.6


User provided reference genes

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