Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G3683 Fragaria x ananassa HOM05D004953 ORTHO05D006193 9.1e-137 490.3 266 100.0
FAN24G2388 Fragaria x ananassa HOM05D004953 ORTHO05D006193 7.3e-62 241.5 344 47.1
FvH4_2g17460 Fragaria vesca HOM05D004953 ORTHO05D006193 2.8e-61 239.6 344 46.8
FAN27G2958 Fragaria x ananassa HOM05D004953 ORTHO05D006193 1.8e-60 236.9 344 46.5
FAN15G1962 Fragaria x ananassa HOM05D004953 ORTHO05D006193 4.0e-60 235.7 345 46.1
RcHm_v2.0_Chr6g0282191 Rosa chinensis HOM05D004953 ORTHO05D006193 2.9e-58 229.6 344 45.1
FvH4_3g38850 Fragaria vesca HOM05D004953 ORTHO05D006193 5.4e-57 225.3 124 95.2
FvH4_2g09600 Fragaria vesca HOM05D004953 ORTHO05D006193 1.7e-50 203.8 165 72.1
FAN24G3373 Fragaria x ananassa HOM05D004953 ORTHO05D006193 3.2e-49 199.5 171 69.6
FvH4_6g27414 Fragaria vesca HOM05D004953 ORTHO05D006193 6.7e-47 191.8 132 84.1
FvH4_4g10312 Fragaria vesca HOM05D004953 ORTHO05D006193 1.5e-46 190.7 133 84.2
FvH4_2g12761 Fragaria vesca HOM05D004953 ORTHO05D006193 5.6e-46 188.7 132 75.8
MD05G1153500 Malus domestica HOM05D004953 ORTHO05D006193 3.7e-45 186.0 344 38.1
GSVIVG01001528001 Vitis vinifera HOM05D004953 ORTHO05D006193 3.7e-45 186.0 343 37.0
Manes.13G056300 Manihot esculenta HOM05D004953 ORTHO05D006193 4.8e-45 185.7 348 36.5
Dinv28790 Davidia involucrata HOM05D004953 ORTHO05D006193 2.9e-42 176.4 344 36.0
Lj1g0025378 Lotus japonicus HOM05D004953 ORTHO05D006193 3.8e-42 176.0 343 36.2
CANSAT01G2219 Cannabis sativa HOM05D004953 ORTHO05D006193 4.9e-42 175.6 349 35.5
Medtr7g080880 Medicago truncatula HOM05D004953 ORTHO05D006193 4.9e-42 175.6 343 37.6
Thecc.01G207300 Theobroma cacao HOM05D004953 ORTHO05D006193 1.1e-41 174.5 347 34.9
CARHR183800 Cardamine hirsuta HOM05D004953 ORTHO05D006193 3.2e-41 172.9 350 34.9
FAN14G2572 Fragaria x ananassa HOM05D004953 ORTHO05D006193 5.5e-41 172.2 136 69.1
AT5G48390 Arabidopsis thaliana HOM05D004953 ORTHO05D006193 7.1e-41 171.8 350 35.1
Ca_08034_v3 Cicer arietinum L. HOM05D004953 ORTHO05D006193 9.3e-41 171.4 349 36.7
Duzib133G0915 Durio zibethinus HOM05D004953 ORTHO05D006193 1.2e-40 171.0 347 33.7
Lj2C1111T4 Lonicera japonica HOM05D004953 ORTHO05D006193 2.1e-40 170.2 343 35.3
FAN09G3899 Fragaria x ananassa HOM05D004953 ORTHO05D006193 3.5e-40 169.5 111 89.2
Glyma.18G246600 Glycine max HOM05D004953 ORTHO05D006193 3.5e-40 169.5 346 35.5
Cpa.g.sc8.38 Carica papaya HOM05D004953 ORTHO05D006193 4.6e-40 169.1 349 34.1
FAN14G1126 Fragaria x ananassa HOM05D004953 ORTHO05D006193 6.0e-40 168.7 111 80.2
Eucgr.K00106 Eucalyptus grandis HOM05D004953 ORTHO05D006193 7.9e-40 168.3 352 33.2
Thhalv10005371m.g Eutrema salsugineum HOM05D004953 ORTHO05D006193 7.9e-40 168.3 353 33.4
Psat3g100880 Pisum sativum HOM05D004953 ORTHO05D006193 7.9e-40 168.3 349 35.2
FvH4_6g36881 Fragaria vesca HOM05D004953 ORTHO05D006193 1.0e-39 167.9 132 69.7
TWI36G1252 Tripterygium wilfordii HOM05D004953 ORTHO05D006193 1.0e-39 167.9 349 33.8
AL8G21200 Arabidopsis lyrata HOM05D004953 ORTHO05D006193 2.3e-39 166.8 350 34.3
Carub.0008s0798 Capsella rubella HOM05D004953 ORTHO05D006193 2.3e-39 166.8 350 34.3
FvH4_7g08382 Fragaria vesca HOM05D004953 ORTHO05D006193 4.3e-38 162.5 135 77.0
CiPaw.13G055800 Carya illinoinensis HOM05D004953 ORTHO05D006193 7.4e-38 161.8 351 33.3
TPR.G35843 Trifolium pratense HOM05D004953 ORTHO05D006193 7.4e-38 161.8 357 35.3
Cc01_g15850 Coffea canephora HOM05D004953 ORTHO05D006193 9.7e-38 161.4 345 33.0
THA.LOC104819011 Tarenaya hassleriana HOM05D004953 ORTHO05D006193 9.7e-38 161.4 352 33.8
Nn1g09452 Nelumbo nucifera HOM05D004953 ORTHO05D006193 1.3e-37 161.0 341 33.1
Ciclev10018269m.g Citrus clementina HOM05D004953 ORTHO05D006193 1.6e-37 160.6 349 33.2
Gohir.A11G144000 Gossypium hirsutum HOM05D004953 ORTHO05D006193 1.6e-37 160.6 347 32.6
Sp2g18750 Schrenkiella parvula HOM05D004953 ORTHO05D006193 1.6e-37 160.6 357 32.5
Gorai.007G161300 Gossypium raimondii HOM05D004953 ORTHO05D006193 2.2e-37 160.2 347 32.6
Gohir.D11G150400 Gossypium hirsutum HOM05D004953 ORTHO05D006193 6.3e-37 158.7 347 32.3
A06p39200 Brassica napus HOM05D004953 ORTHO05D006193 1.4e-36 157.5 345 32.8
Solyc09g042760.2 Solanum lycopersicum HOM05D004953 ORTHO05D006193 1.4e-36 157.5 344 32.3
Sopen09g015810 Solanum pennellii HOM05D004953 ORTHO05D006193 2.4e-36 156.8 343 32.4
C07p39140 Brassica napus HOM05D004953 ORTHO05D006193 5.3e-36 155.6 345 32.8
BolC7t44434H Brassica oleracea HOM05D004953 ORTHO05D006193 5.3e-36 155.6 345 32.8
CAN.G1468.3 Capsicum annuum HOM05D004953 ORTHO05D006193 5.3e-36 155.6 341 33.4
Atru.BG.40.p Acer truncatum HOM05D004953 ORTHO05D006193 1.2e-35 154.5 350 33.7
HanXRQChr12g0363951 Helianthus annuus HOM05D004953 ORTHO05D006193 4.5e-35 152.5 344 32.6
AUR62028642 Chenopodium quinoa HOM05D004953 ORTHO05D006193 7.6e-35 151.8 348 31.9
PGSC0003DMG400021911 Solanum tuberosum HOM05D004953 ORTHO05D006193 7.6e-35 151.8 344 31.7
PSO017G6601 Papaver somniferum HOM05D004953 ORTHO05D006193 1.7e-34 150.6 343 32.7
PSO478G1281 Papaver somniferum HOM05D004953 ORTHO05D006193 1.7e-34 150.6 343 32.7
Prupe.8G186900 Prunus persica HOM05D004953 ORTHO05D006193 2.9e-34 149.8 408 32.1
MELO3C008751.2 Cucumis melo HOM05D004953 ORTHO05D006193 5.0e-34 149.1 344 31.7
vmacro02841 Vaccinium macrocarpon HOM05D004953 ORTHO05D006193 8.5e-34 148.3 367 30.5
Aqoxy2G04177 Aquilegia oxysepala HOM05D004953 ORTHO05D006193 1.4e-33 147.5 360 31.1
BcaC06g30800 Brassica carinata HOM05D004953 ORTHO05D006193 1.4e-33 147.5 292 35.3
CsaV3_2G009520 Cucumis sativus L. HOM05D004953 ORTHO05D006193 1.4e-33 147.5 344 31.4
Actinidia04690 Actinidia chinensis HOM05D004953 ORTHO05D006193 2.5e-33 146.7 121 62.8
DCAR_004775 Daucus carota HOM05D004953 ORTHO05D006193 4.2e-33 146.0 120 64.2
Phvul.008G050500 Phaseolus vulgaris HOM05D004953 ORTHO05D006193 5.5e-33 145.6 123 65.0
Aa31LG11G3580 Aethionema arabicum HOM05D004953 ORTHO05D006193 7.2e-33 145.2 362 30.9
VMungo1383G3652 Vigna mungo HOM05D004953 ORTHO05D006193 7.2e-33 145.2 123 65.9
COL.COLO4_34276 Corchorus olitorius HOM05D004953 ORTHO05D006193 9.3e-33 144.8 121 63.6
Rhsim13G0055000 Rhododendron simsii HOM05D004953 ORTHO05D006193 9.3e-33 144.8 121 62.0
SGA_v2.0_scaffold8G04488 Striga asiatica HOM05D004953 ORTHO05D006193 1.2e-32 144.4 121 59.5
QL09p045412 Quercus lobata HOM05D004953 ORTHO05D006193 2.1e-32 143.7 381 31.5
TAR365G0304 Trochodendron aralioides HOM05D004953 ORTHO05D006193 2.1e-32 143.7 117 66.7
Sed0024263 Sechium edule HOM05D004953 ORTHO05D006193 7.9e-32 141.7 343 30.3
Cfa010574 Carpinus fangiana HOM05D004953 ORTHO05D006193 1.0e-31 141.4 341 31.4
CSS0005222 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 1.4e-31 141.0 121 61.2
CSS0012001 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 1.4e-31 141.0 121 61.2
Sabra14G0134100 Salix brachista HOM05D004953 ORTHO05D006193 1.4e-31 141.0 121 64.5
CANSAT01G2868 Cannabis sativa HOM05D004953 ORTHO05D006193 3.0e-31 139.8 275 36.4
Migut.D00772 Erythranthe guttata HOM05D004953 ORTHO05D006193 3.9e-31 139.4 122 59.8
SalBow3G1227 Salvia bowleyana HOM05D004953 ORTHO05D006193 5.7e-30 135.6 122 59.8
Aa31LG11G8930 Aethionema arabicum HOM05D004953 ORTHO05D006193 9.7e-30 134.8 139 54.0
Haze_03508 Corylus avellana HOM05D004953 ORTHO05D006193 9.7e-30 134.8 341 30.5
Lsat_1_v5_gn_8_98501 Lactuca sativa HOM05D004953 ORTHO05D006193 2.2e-29 133.7 344 29.9
Potri.014G175350 Populus trichocarpa HOM05D004953 ORTHO05D006193 3.7e-29 132.9 123 63.4
SHI10219 Sapria himalayana HOM05D004953 ORTHO05D006193 4.8e-29 132.5 123 59.3
Ah.11g050790 Amaranthus hybridus HOM05D004953 ORTHO05D006193 2.4e-28 130.2 347 28.2
Nitab4.5_0008926g0010 Nicotiana tabacum HOM05D004953 ORTHO05D006193 4.1e-28 129.4 121 56.2
Peaxi162Scf02239g00020 Petunia axillaris HOM05D004953 ORTHO05D006193 5.3e-28 129.0 122 55.7
ClCG11G010960 Citrullus lanatus HOM05D004953 ORTHO05D006193 9.1e-28 128.3 344 30.2
Hund02809 Selenicereus undatus HOM05D004953 ORTHO05D006193 3.4e-27 126.3 121 54.5
Oeu013420.1 Olea europaea HOM05D004953 ORTHO05D006193 7.7e-27 125.2 122 57.4
ECA236G0268 Erigeron canadensis HOM05D004953 ORTHO05D006193 1.0e-26 124.8 316 30.7
arahy.Tifrunner.gnm1.ann1.57Z9Z9 Arachis hypogaea HOM05D004953 ORTHO05D006193 1.7e-26 124.0 406 28.1
EL10Ac5g10584 Beta vulgaris HOM05D004953 ORTHO05D006193 2.2e-26 123.6 126 56.3
Nitab4.5_0000038g0380 Nicotiana tabacum HOM05D004953 ORTHO05D006193 8.5e-26 121.7 125 54.4
Actinidia33396 Actinidia chinensis HOM05D004953 ORTHO05D006193 1.4e-25 120.9 274 32.1
AUR62008065 Chenopodium quinoa HOM05D004953 ORTHO05D006193 1.2e-24 117.9 349 28.1
CDE07G1537 Ceratophyllum demersum HOM05D004953 ORTHO05D006193 1.8e-23 114.0 118 50.8
Sc17g0001570 Simmondsia chinensis HOM05D004953 ORTHO05D006193 2.3e-23 113.6 126 51.6
MBI10_g23576_MAGBIO Magnolia biondii HOM05D004953 ORTHO05D006193 3.0e-23 113.2 120 53.3
Sed0015090 Sechium edule HOM05D004953 ORTHO05D006193 1.7e-21 107.5 347 27.1
Lalb_Chr03g0040531 Lupinus albus HOM05D004953 ORTHO05D006193 1.5e-19 100.9 325 29.2
unitig_52.g16794 Utricularia gibba HOM05D004953 ORTHO05D006193 2.6e-19 100.1 122 41.0
HPP92_001916 Vanilla planifolia HOM05D004953 ORTHO05D006193 6.5e-18 95.5 118 46.6
FAN14G1607 Fragaria x ananassa HOM05D004953 ORTHO05D006193 8.5e-18 95.1 59 89.8
Os01g0890900 Oryza sativa ssp. japonica HOM05D004953 ORTHO05D006193 2.0e-14 84.0 120 45.8
FvH4_6g36680 Fragaria vesca HOM05D004953 ORTHO05D006193 2.6e-14 83.6 64 70.3
ATR0743G003 Amborella trichopoda HOM05D004953 ORTHO05D006193 5.7e-14 82.4 96 42.7
Zm00001eb145140 Zea mays HOM05D004953 ORTHO05D006193 1.7e-13 80.9 176 35.2
Actinidia23342 Actinidia chinensis HOM05D004953 ORTHO05D006193 6.3e-13 79.0 264 28.8
FvH4_4g15200 Fragaria vesca HOM05D004953 ORTHO05D006193 2.4e-12 77.0 82 56.1
FAN14G2335 Fragaria x ananassa HOM05D004953 ORTHO05D006193 3.8e-10 69.7 166 37.3
FAN24G1763 Fragaria x ananassa HOM05D004953 ORTHO05D006193 5.0e-10 69.3 37 86.5
SEGI_29467 Sequoiadendron giganteum HOM05D004953 ORTHO05D006193 4.2e-09 66.2 72 41.7
TPR.G1778 Trifolium pratense HOM05D004953 ORTHO05D019267 7.2e-09 65.5 92 43.5
CSS0012475 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 8.0e-08 62.0 49 53.1
CSS0023073 Camellia sinensis var. sinensis HOM05D004953 ORTHO05D006193 2.3e-07 60.5 49 53.1
SMO201G0221 Selaginella moellendorffii HOM05D004953 ORTHO05D006193 3.0e-07 60.1 83 36.1
FvH4_2g12781 Fragaria vesca HOM05D004953 ORTHO05D196320 8.8e-07 58.5 36 83.3


User provided reference genes

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