Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G3494 Fragaria x ananassa HOM05D007699 ORTHO05D009796 3.8e-31 137.5 68 100.0
FvH4_3g13700 Fragaria vesca HOM05D007699 ORTHO05D009796 9.4e-30 132.9 68 97.1
FAN11G1327 Fragaria x ananassa HOM05D007699 ORTHO05D009796 1.2e-24 115.9 62 88.7
FAN08G2016 Fragaria x ananassa HOM05D007699 ORTHO05D009796 2.2e-23 111.7 71 81.7
FAN13G3199 Fragaria x ananassa HOM05D007699 ORTHO05D009796 9.1e-17 89.7 50 86.0
Nitab4.5_0005352g0040 Nicotiana tabacum HOM05D007699 ORTHO05D009796 1.6e-16 89.0 62 71.0
FAN18G1300 Fragaria x ananassa HOM05D005738 ORTHO05D007135 4.5e-16 87.4 68 63.2
FAN18G3749 Fragaria x ananassa HOM05D005738 ORTHO05D007135 5.9e-16 87.0 65 64.6
Mapoly0020s0143 Marchantia polymorpha HOM05D007699 ORTHO05D009796 3.8e-15 84.3 40 95.0
TPR.G12299 Trifolium pratense HOM05D007699 ORTHO05D009796 1.1e-14 82.8 45 86.7
Medtr3g105890 Medicago truncatula HOM05D007699 ORTHO05D009796 1.9e-14 82.0 40 95.0
Potri.011G103301 Populus trichocarpa HOM05D007699 ORTHO05D009796 1.9e-14 82.0 40 95.0
FAN08G0324 Fragaria x ananassa HOM05D007699 ORTHO05D009796 2.5e-14 81.6 39 94.9
Prupe.7G080000 Prunus persica HOM05D007699 ORTHO05D009796 3.2e-14 81.3 39 94.9
Medtr3g084270 Medicago truncatula HOM05D007699 ORTHO05D009796 4.2e-14 80.9 43 86.0
Phvul.001G066700 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 4.2e-14 80.9 61 67.2
Phvul.008G062500 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 4.2e-14 80.9 42 88.1
Prupe.7G069600 Prunus persica HOM05D007699 ORTHO05D009796 4.2e-14 80.9 39 94.9
QL03p053410 Quercus lobata HOM05D007699 ORTHO05D009796 4.2e-14 80.9 36 100.0
C03p91420 Brassica napus HOM05D007699 ORTHO05D009796 5.5e-14 80.5 37 97.3
Mapoly0086s0020 Marchantia polymorpha HOM05D007699 ORTHO05D009796 5.5e-14 80.5 37 97.3
Sopen12g028800 Solanum pennellii HOM05D007699 ORTHO05D009796 5.5e-14 80.5 38 94.7
A05p18230 Brassica napus HOM05D007699 ORTHO05D009796 7.2e-14 80.1 38 94.7
CARHR088640 Cardamine hirsuta HOM05D007699 ORTHO05D009796 7.2e-14 80.1 48 83.3
Migut.J00839 Erythranthe guttata HOM05D007699 ORTHO05D009796 7.2e-14 80.1 41 85.4
Hma1.2p1_0886F.1_g232660 Hydrangea macrophylla HOM05D007699 ORTHO05D009796 7.2e-14 80.1 38 94.7
Hma1.2p1_0886F.1_g232685 Hydrangea macrophylla HOM05D007699 ORTHO05D009796 7.2e-14 80.1 38 94.7
arahy.Tifrunner.gnm1.ann1.3J1SD9 Arachis hypogaea HOM05D007699 ORTHO05D009796 9.4e-14 79.7 49 77.6
Manes.11G145650 Manihot esculenta HOM05D007699 ORTHO05D009796 9.4e-14 79.7 38 94.7
Potri.011G103401 Populus trichocarpa HOM05D007699 ORTHO05D009796 9.4e-14 79.7 41 87.8
TPR.G38695 Trifolium pratense HOM05D000020 ORTHO05D000543 9.4e-14 79.7 38 94.7
Phvul.001G084100 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 1.2e-13 79.3 38 94.7
Pp3c15_10810 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.2e-13 79.3 58 69.0
Pp3c15_10813 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.2e-13 79.3 58 69.0
Pp3c15_10820 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.2e-13 79.3 58 69.0
arahy.Tifrunner.gnm1.ann1.3C01L3 Arachis hypogaea HOM05D007699 ORTHO05D009796 1.6e-13 79.0 35 100.0
Carub.0003s1340 Capsella rubella HOM05D007699 ORTHO05D009796 1.6e-13 79.0 35 100.0
CARHR185520 Cardamine hirsuta HOM05D007699 ORTHO05D009796 1.6e-13 79.0 35 100.0
Phvul.001G066900 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 1.6e-13 79.0 35 100.0
Gohir.D06G068332 Gossypium hirsutum HOM05D007699 ORTHO05D009796 4.7e-13 77.4 38 92.1
Solyc12g056290.2 Solanum lycopersicum HOM05D007699 ORTHO05D009796 1.4e-12 75.9 35 97.1
FAN11G3758 Fragaria x ananassa HOM05D007699 ORTHO05D009796 1.8e-12 75.5 35 100.0
GSVIVG01037330001 Vitis vinifera HOM05D007699 ORTHO05D009796 2.3e-12 75.1 47 76.6
TPR.G32688 Trifolium pratense HOM05D007699 ORTHO05D009796 3.0e-12 74.7 43 83.7
EL10Ac6g13683 Beta vulgaris HOM05D007699 ORTHO05D009796 4.0e-12 74.3 40 85.0
Ah.10g036850 Amaranthus hybridus HOM05D007699 ORTHO05D009796 5.2e-12 73.9 41 85.4
Pp3s677_20 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.2e-12 73.9 54 68.5
Nn7g36904 Nelumbo nucifera HOM05D007699 ORTHO05D009796 8.8e-12 73.2 36 91.7
EL10Ac6g13349 Beta vulgaris HOM05D007699 ORTHO05D009796 1.2e-11 72.8 35 94.3
EL10Ac6g13624 Beta vulgaris HOM05D007699 ORTHO05D009796 1.2e-11 72.8 35 94.3
EL10Ac6g13685 Beta vulgaris HOM05D007699 ORTHO05D009796 1.2e-11 72.8 35 94.3
Ciclev10018283m.g Citrus clementina HOM05D007699 ORTHO05D009796 1.2e-11 72.8 35 94.3
Pp3c1_6540 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.2e-11 72.8 35 94.3
EL10Ac6g13623 Beta vulgaris HOM05D007699 ORTHO05D009796 2.0e-11 72.0 34 94.1
Gorai.010G079800 Gossypium raimondii HOM05D007699 ORTHO05D009796 2.0e-11 72.0 37 89.2
Pp3c21_2000 Physcomitrium patens HOM05D007699 ORTHO05D009796 3.4e-11 71.2 40 82.5
Pp3c21_2022 Physcomitrium patens HOM05D007699 ORTHO05D009796 3.4e-11 71.2 40 82.5
Pp3c10_15080 Physcomitrium patens HOM05D007699 ORTHO05D009796 4.4e-11 70.9 35 91.4
Pp3c10_15084 Physcomitrium patens HOM05D007699 ORTHO05D009796 4.4e-11 70.9 35 91.4
Pp3s1006_30 Physcomitrium patens HOM05D007699 ORTHO05D009796 4.4e-11 70.9 35 91.4
Pp3s638_22 Physcomitrium patens HOM05D007699 ORTHO05D009796 4.4e-11 70.9 35 91.4
Pp3s677_10 Physcomitrium patens HOM05D007699 ORTHO05D009796 4.4e-11 70.9 35 91.4
Pp3s677_11 Physcomitrium patens HOM05D007699 ORTHO05D009796 4.4e-11 70.9 35 91.4
Thecc.10G037500 Theobroma cacao HOM05D007699 ORTHO05D009796 4.4e-11 70.9 34 94.1
EL10Ac6g13684 Beta vulgaris HOM05D007699 ORTHO05D009796 5.7e-11 70.5 34 94.1
Gohir.A11G277350 Gossypium hirsutum HOM05D007699 ORTHO05D009796 7.5e-11 70.1 52 65.4
Phvul.001G090500 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 9.8e-11 69.7 40 87.5
Gorai.011G262200 Gossypium raimondii HOM05D007699 ORTHO05D009796 1.3e-10 69.3 31 100.0
Medtr8g461450 Medicago truncatula HOM05D007699 ORTHO05D009796 1.3e-10 69.3 31 100.0
Potri.005G055534 Populus trichocarpa HOM05D007699 ORTHO05D009796 1.3e-10 69.3 31 100.0
Potri.005G055667 Populus trichocarpa HOM05D007699 ORTHO05D009796 1.3e-10 69.3 31 100.0
CSS0021910 Camellia sinensis var. sinensis HOM05D007699 ORTHO05D009796 2.2e-10 68.6 39 82.1
CSS0023756 Camellia sinensis var. sinensis HOM05D007699 ORTHO05D009796 2.2e-10 68.6 41 78.0
Gorai.011G262800 Gossypium raimondii HOM05D007699 ORTHO05D009796 2.2e-10 68.6 31 100.0
Pp3c24_6960 Physcomitrium patens HOM05D007699 ORTHO05D009796 2.2e-10 68.6 34 91.2
Pp3c24_6961 Physcomitrium patens HOM05D007699 ORTHO05D009796 2.2e-10 68.6 34 91.2
SHI29091 Sapria himalayana HOM05D007699 ORTHO05D009796 2.8e-10 68.2 33 93.9
FAN18G1871 Fragaria x ananassa HOM05D007699 ORTHO05D009796 3.7e-10 67.8 35 88.6
PGSC0003DMG400029597 Solanum tuberosum HOM05D000312 ORTHO05D000221 4.8e-10 67.4 31 96.8
Carub.0006s3371 Capsella rubella HOM05D007699 ORTHO05D009796 6.3e-10 67.0 30 100.0
Glyma.19G099100 Glycine max HOM05D007699 ORTHO05D009796 6.3e-10 67.0 30 100.0
Medtr3g108610 Medicago truncatula HOM05D007699 ORTHO05D009796 6.3e-10 67.0 31 96.8
Pp3c1_26810 Physcomitrium patens HOM05D007699 ORTHO05D009796 6.3e-10 67.0 31 96.8
Pp3c1_26830 Physcomitrium patens HOM05D007699 ORTHO05D009796 6.3e-10 67.0 31 96.8
Phvul.009G076400 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 1.1e-09 66.2 37 86.5
arahy.Tifrunner.gnm1.ann1.C3EWW9 Arachis hypogaea HOM05D007699 ORTHO05D009796 3.1e-09 64.7 30 96.7
EL10Ac6g13625 Beta vulgaris HOM05D007699 ORTHO05D009796 4.1e-09 64.3 33 90.9
EL10Ac6g13621 Beta vulgaris HOM05D007699 ORTHO05D009796 3.5e-08 61.2 36 77.8
Medtr2g101670 Medicago truncatula HOM05D007699 ORTHO05D009796 5.9e-08 60.5 33 81.8
Pp3c24_16090 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.3e-07 59.3 41 70.7
Pp3c24_16091 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.3e-07 59.3 41 70.7
AT2G15530 Arabidopsis thaliana HOM05D000187 ORTHO05D000230 8.6e-07 56.6 47 61.7
Medtr6g070990 Medicago truncatula HOM05D007699 ORTHO05D009796 1.1e-06 56.2 25 100.0
SHI28974 Sapria himalayana HOM05D007699 ORTHO05D009796 2.5e-06 55.1 31 80.6
Pp3c27_1930 Physcomitrium patens HOM05D007699 ORTHO05D009796 4.2e-06 54.3 32 75.0


User provided reference genes

Program Settings