Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_3g29500 Fragaria vesca HOM05D004814 ORTHO05D005778 9.8e-104 380.2 197 100.0
FAN11G3417 Fragaria x ananassa HOM05D004814 ORTHO05D005778 9.8e-104 380.2 197 100.0
FAN21G1289 Fragaria x ananassa HOM05D004814 ORTHO05D005778 4.9e-103 377.9 197 99.5
FAN16G2593 Fragaria x ananassa HOM05D004814 ORTHO05D005778 9.2e-102 373.6 197 98.5
FAN25G3790 Fragaria x ananassa HOM05D004814 ORTHO05D005778 5.6e-99 364.4 197 97.5
RcHm_v2.0_Chr5g0054381 Rosa chinensis HOM05D004814 ORTHO05D005778 2.8e-98 362.1 198 96.5
MD03G1187000 Malus domestica HOM05D004814 ORTHO05D005778 3.6e-82 308.5 200 84.0
QL08p004842 Quercus lobata HOM05D004814 ORTHO05D005778 1.7e-76 289.7 208 78.8
Cfa020215 Carpinus fangiana HOM05D004814 ORTHO05D005778 8.6e-76 287.3 208 76.9
Prupe.4G239600 Prunus persica HOM05D004814 ORTHO05D005778 8.6e-76 287.3 200 78.5
CiPaw.12G136400 Carya illinoinensis HOM05D004814 ORTHO05D005778 1.9e-75 286.2 208 78.4
Haze_09803 Corylus avellana HOM05D004814 ORTHO05D005778 6.2e-74 281.2 198 79.8
CANSAT11G0174 Cannabis sativa HOM05D004814 ORTHO05D005778 8.1e-74 280.8 206 76.7
MD11G1202000 Malus domestica HOM05D004814 ORTHO05D005778 3.1e-73 278.9 200 77.0
ClCG09G021040 Citrullus lanatus HOM05D004814 ORTHO05D005778 2.9e-71 272.3 208 76.0
Dinv10318 Davidia involucrata HOM05D004814 ORTHO05D005778 2.9e-71 272.3 203 77.3
CsaV3_7G018640 Cucumis sativus L. HOM05D004814 ORTHO05D005778 4.9e-71 271.6 208 75.0
MELO3C024899.2 Cucumis melo HOM05D004814 ORTHO05D005778 1.4e-70 270.0 208 75.5
arahy.Tifrunner.gnm1.ann1.CWZH2K Arachis hypogaea HOM05D004814 ORTHO05D005778 1.7e-68 263.1 208 73.6
arahy.Tifrunner.gnm1.ann1.0CA1AM Arachis hypogaea HOM05D004814 ORTHO05D005778 2.3e-68 262.7 208 73.1
Dinv40842 Davidia involucrata HOM05D004814 ORTHO05D005778 3.9e-68 261.9 207 74.4
arahy.Tifrunner.gnm1.ann1.X98J9H Arachis hypogaea HOM05D004814 ORTHO05D005778 5.6e-67 258.1 208 73.6
Glyma.18G079900 Glycine max HOM05D004814 ORTHO05D005778 2.8e-66 255.8 206 69.4
TWI39G1010 Tripterygium wilfordii HOM05D004814 ORTHO05D005778 2.8e-66 255.8 206 72.3
arahy.Tifrunner.gnm1.ann1.RG8M6K Arachis hypogaea HOM05D004814 ORTHO05D005778 4.8e-66 255.0 208 71.6
Sabra11G0087000 Salix brachista HOM05D004814 ORTHO05D005778 4.8e-66 255.0 208 69.2
Potri.001G365600 Populus trichocarpa HOM05D004814 ORTHO05D005778 8.1e-66 254.2 209 70.8
Aa31LG8G330 Aethionema arabicum HOM05D004814 ORTHO05D005778 1.4e-65 253.4 203 71.4
Sabra16G0239200 Salix brachista HOM05D004814 ORTHO05D005778 1.8e-65 253.1 213 70.0
Potri.011G092800 Populus trichocarpa HOM05D004814 ORTHO05D005778 2.4e-65 252.7 208 69.2
Sed0017349 Sechium edule HOM05D004814 ORTHO05D005778 3.1e-65 252.3 208 72.1
Hma1.2p1_0889F.1_g232870 Hydrangea macrophylla HOM05D004814 ORTHO05D005778 6.9e-65 251.1 217 67.7
Actinidia30418 Actinidia chinensis HOM05D004814 ORTHO05D005778 9.0e-65 250.8 205 70.7
TWI38G0785 Tripterygium wilfordii HOM05D004814 ORTHO05D005778 1.2e-64 250.4 207 71.5
Glyma.08G327500 Glycine max HOM05D004814 ORTHO05D005778 1.5e-64 250.0 211 70.1
THA.LOC104810287 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 2.0e-64 249.6 201 71.1
AL3G24860 Arabidopsis lyrata HOM05D004814 ORTHO05D005778 2.6e-64 249.2 198 70.2
AT3G13120 Arabidopsis thaliana HOM05D004814 ORTHO05D005778 3.4e-64 248.8 198 69.7
Carub.0003s1246 Capsella rubella HOM05D004814 ORTHO05D005778 4.4e-64 248.4 202 69.8
Ca_20138_v3 Cicer arietinum L. HOM05D004814 ORTHO05D005778 5.8e-64 248.1 204 69.6
Manes.15G061900 Manihot esculenta HOM05D004814 ORTHO05D005778 5.8e-64 248.1 213 69.5
CARHR087710 Cardamine hirsuta HOM05D004814 ORTHO05D005778 7.6e-64 247.7 197 71.6
DCAR_013223 Daucus carota HOM05D004814 ORTHO05D005778 2.9e-63 245.7 197 73.1
Manes.03G139872 Manihot esculenta HOM05D004814 ORTHO05D005778 3.8e-63 245.4 212 68.9
Nn1g03216 Nelumbo nucifera HOM05D004814 ORTHO05D005778 8.4e-63 244.2 209 69.9
GSVIVG01014640001 Vitis vinifera HOM05D004814 ORTHO05D005778 1.4e-62 243.4 207 68.6
TAR629G3287 Trochodendron aralioides HOM05D004814 ORTHO05D005778 1.9e-62 243.0 208 70.7
Thhalv10021566m.g Eutrema salsugineum HOM05D004814 ORTHO05D005778 2.4e-62 242.7 200 67.5
Actinidia05019 Actinidia chinensis HOM05D004814 ORTHO05D005778 4.2e-62 241.9 205 68.8
CSS0025876 Camellia sinensis var. sinensis HOM05D004814 ORTHO05D005778 4.2e-62 241.9 207 69.6
THA.LOC104815700 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 5.4e-62 241.5 202 68.8
THA.LOC104822735 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 5.4e-62 241.5 200 70.5
Medtr3g058430 Medicago truncatula HOM05D004814 ORTHO05D005778 7.1e-62 241.1 199 70.4
TAR626G1431 Trochodendron aralioides HOM05D004814 ORTHO05D005778 7.1e-62 241.1 208 69.7
Oeu057089.1 Olea europaea HOM05D004814 ORTHO05D005778 1.6e-61 240.0 199 69.3
TPR.G30737 Trifolium pratense HOM05D004814 ORTHO05D005778 1.6e-61 240.0 204 69.1
A03p38040 Brassica napus HOM05D004814 ORTHO05D005778 4.6e-61 238.4 199 68.8
Gorai.007G310400 Gossypium raimondii HOM05D004814 ORTHO05D005778 4.6e-61 238.4 199 69.3
Oeu049351.1 Olea europaea HOM05D004814 ORTHO05D005778 4.6e-61 238.4 199 69.3
Hund01909 Selenicereus undatus HOM05D004814 ORTHO05D005778 4.6e-61 238.4 198 68.7
Phvul.001G030600 Phaseolus vulgaris HOM05D004814 ORTHO05D005778 7.8e-61 237.7 210 67.1
PGR031G1774 Punica granatum HOM05D004814 ORTHO05D005778 7.8e-61 237.7 200 70.0
Gohir.D11G287000 Gossypium hirsutum HOM05D004814 ORTHO05D005778 1.3e-60 236.9 199 69.3
BcaB06g25486 Brassica carinata HOM05D004814 ORTHO05D005778 1.7e-60 236.5 201 68.2
BcaNung05270 Brassica carinata HOM05D004814 ORTHO05D005778 1.7e-60 236.5 201 69.2
Lalb_Chr05g0211691 Lupinus albus HOM05D004814 ORTHO05D005778 1.7e-60 236.5 210 67.1
C03p46130 Brassica napus HOM05D004814 ORTHO05D005778 3.0e-60 235.7 201 68.2
BraA03t12957Z Brassica rapa HOM05D004814 ORTHO05D005778 3.0e-60 235.7 206 66.0
Atru.chr2.3664 Acer truncatum HOM05D004814 ORTHO05D005778 3.9e-60 235.3 205 69.8
BcaC01g04010 Brassica carinata HOM05D004814 ORTHO05D005778 3.9e-60 235.3 201 67.7
BolC3t16886H Brassica oleracea HOM05D004814 ORTHO05D005778 3.9e-60 235.3 201 67.7
Lsat_1_v5_gn_9_90400 Lactuca sativa HOM05D004814 ORTHO05D005778 3.9e-60 235.3 196 67.3
Gohir.A11G276900 Gossypium hirsutum HOM05D004814 ORTHO05D005778 5.1e-60 235.0 199 68.3
PGSC0003DMG400014378 Solanum tuberosum HOM05D004814 ORTHO05D005778 6.6e-60 234.6 196 68.9
Aqoxy4G02247 Aquilegia oxysepala HOM05D004814 ORTHO05D005778 1.5e-59 233.4 201 68.7
Gohir.A01G090000 Gossypium hirsutum HOM05D004814 ORTHO05D005778 1.5e-59 233.4 198 69.7
Phvul.006G055300 Phaseolus vulgaris HOM05D004814 ORTHO05D005778 1.5e-59 233.4 210 66.2
A05p36420 Brassica napus HOM05D004814 ORTHO05D005778 1.9e-59 233.0 202 67.3
Gohir.D01G075300 Gossypium hirsutum HOM05D004814 ORTHO05D005778 1.9e-59 233.0 198 69.2
Gorai.002G098500 Gossypium raimondii HOM05D004814 ORTHO05D005778 1.9e-59 233.0 198 69.2
Thecc.07G016800 Theobroma cacao HOM05D004814 ORTHO05D005778 2.5e-59 232.6 199 69.3
A01p40420 Brassica napus HOM05D004814 ORTHO05D005778 3.3e-59 232.3 203 67.0
BraA01t04077Z Brassica rapa HOM05D004814 ORTHO05D005778 3.3e-59 232.3 203 67.0
Psat5g170120 Pisum sativum HOM05D004814 ORTHO05D005778 4.3e-59 231.9 202 67.3
BolC5t34154H Brassica oleracea HOM05D004814 ORTHO05D005778 5.6e-59 231.5 204 66.7
Sc16g0007970 Simmondsia chinensis HOM05D004814 ORTHO05D005778 5.6e-59 231.5 202 69.3
Sopen10g001990 Solanum pennellii HOM05D004814 ORTHO05D005778 5.6e-59 231.5 196 68.4
BcaC05g29209 Brassica carinata HOM05D004814 ORTHO05D005778 7.3e-59 231.1 204 66.7
C05p54820 Brassica napus HOM05D004814 ORTHO05D005778 7.3e-59 231.1 204 66.7
Sp3g11290 Schrenkiella parvula HOM05D004814 ORTHO05D005778 7.3e-59 231.1 202 66.3
PSO541G0969 Papaver somniferum HOM05D004814 ORTHO05D005778 9.6e-59 230.7 208 67.3
BraA05t22442Z Brassica rapa HOM05D004814 ORTHO05D005778 1.3e-58 230.3 202 66.8
Aa31LG10G250 Aethionema arabicum HOM05D004814 ORTHO05D005778 1.6e-58 229.9 204 66.2
Nitab4.5_0006756g0010 Nicotiana tabacum HOM05D004814 ORTHO05D005778 1.6e-58 229.9 196 66.8
Ah.04g166490 Amaranthus hybridus HOM05D004814 ORTHO05D005778 2.8e-58 229.2 201 67.2
EL10Ac4g07605 Beta vulgaris HOM05D004814 ORTHO05D005778 2.8e-58 229.2 202 68.8
PSO675G8482 Papaver somniferum HOM05D004814 ORTHO05D005778 2.8e-58 229.2 208 66.8
CAN.G492.31 Capsicum annuum HOM05D004814 ORTHO05D005778 3.6e-58 228.8 199 66.8
Rhsim06G0227300 Rhododendron simsii HOM05D004814 ORTHO05D005778 8.1e-58 227.6 208 65.9
Solyc10g006030.3 Solanum lycopersicum HOM05D004814 ORTHO05D005778 8.1e-58 227.6 196 67.9
Cc05_g14790 Coffea canephora HOM05D004814 ORTHO05D005778 1.1e-57 227.3 201 67.7
Ciclev10009615m.g Citrus clementina HOM05D004814 ORTHO05D005778 2.4e-57 226.1 198 68.2
Nitab4.5_0003491g0010 Nicotiana tabacum HOM05D004814 ORTHO05D005778 3.1e-57 225.7 196 65.8
Eucgr.F03697 Eucalyptus grandis HOM05D004814 ORTHO05D005778 4.0e-57 225.3 197 67.0
AUR62036421 Chenopodium quinoa HOM05D004814 ORTHO05D005778 6.9e-57 224.6 204 65.7
AUR62036427 Chenopodium quinoa HOM05D004814 ORTHO05D005778 6.9e-57 224.6 204 65.7
AUR62040646 Chenopodium quinoa HOM05D004814 ORTHO05D005778 6.9e-57 224.6 204 65.7
COL.COLO4_09806 Corchorus olitorius HOM05D004814 ORTHO05D005778 6.9e-57 224.6 199 67.8
HanXRQChr03g0061321 Helianthus annuus HOM05D004814 ORTHO05D005778 6.9e-57 224.6 199 65.8
AUR62017069 Chenopodium quinoa HOM05D004814 ORTHO05D005778 9.0e-57 224.2 204 66.2
vmacro22713 Vaccinium macrocarpon HOM05D004814 ORTHO05D005778 9.0e-57 224.2 204 66.2
Ah.06g181280 Amaranthus hybridus HOM05D004814 ORTHO05D005778 1.2e-56 223.8 201 67.2
Duzib213G0234 Durio zibethinus HOM05D004814 ORTHO05D005778 1.5e-56 223.4 200 67.5
SGA_v2.0_scaffold8G04398 Striga asiatica HOM05D004814 ORTHO05D005778 7.6e-56 221.1 199 66.8
HanXRQChr13g0408121 Helianthus annuus HOM05D004814 ORTHO05D005778 9.9e-56 220.7 200 65.5
MSTRG.14478 Avicennia marina HOM05D004814 ORTHO05D005778 2.9e-55 219.2 198 68.2
ECA240G4731 Erigeron canadensis HOM05D001580 ORTHO05D001517 5.4e-54 214.9 145 75.2
unitig_62.g23297 Utricularia gibba HOM05D004814 ORTHO05D005778 1.6e-53 213.4 188 65.4
Actinidia05024 Actinidia chinensis HOM05D004814 ORTHO05D005778 2.7e-53 212.6 197 62.9
A01p40680 Brassica napus HOM05D004814 ORTHO05D005778 3.5e-53 212.2 200 62.5
Peaxi162Scf00900g00010 Petunia axillaris HOM05D004814 ORTHO05D005778 1.0e-52 210.7 153 73.2
Cpa.g.sc12.175 Carica papaya HOM05D004814 ORTHO05D005778 1.1e-51 207.2 104 97.1
Lj1P888T30 Lonicera japonica HOM05D004814 ORTHO05D005778 5.6e-51 204.9 104 96.2
CSS0019029 Camellia sinensis var. sinensis HOM05D004814 ORTHO05D005778 9.6e-51 204.1 115 89.6
VMungo0248G0001 Vigna mungo HOM05D004814 ORTHO05D005778 3.7e-50 202.2 104 93.3
ATR0624G087 Amborella trichopoda HOM05D004814 ORTHO05D005778 4.8e-50 201.8 104 94.2
C01p51960 Brassica napus HOM05D004814 ORTHO05D005778 1.1e-49 200.7 185 61.1
CDE10G1086 Ceratophyllum demersum HOM05D004814 ORTHO05D005778 1.4e-49 200.3 111 89.2
HPP92_020399 Vanilla planifolia HOM05D004814 ORTHO05D005778 1.4e-49 200.3 187 63.6
BraA01t04102Z Brassica rapa HOM05D004814 ORTHO05D005778 4.0e-49 198.7 104 92.3
Zm00001eb008100 Zea mays HOM05D004814 ORTHO05D005778 1.2e-48 197.2 194 59.8
Os03g0196800 Oryza sativa ssp. japonica HOM05D004814 ORTHO05D005778 2.0e-48 196.4 197 56.3
Zm00001eb401060 Zea mays HOM05D004814 ORTHO05D005778 2.9e-47 192.6 198 56.1
QL05p065674 Quercus lobata HOM05D004814 ORTHO05D005778 6.5e-47 191.4 103 91.3
MBI19_g45743_MAGBIO Magnolia biondii HOM05D004814 ORTHO05D005778 1.1e-46 190.7 100 90.0
QL05p065593 Quercus lobata HOM05D004814 ORTHO05D005778 1.3e-44 183.7 103 89.3
PSO832G2117 Papaver somniferum HOM05D004814 ORTHO05D005778 3.9e-44 182.2 208 55.3
AagrBONN_evm.TU.Sc2ySwM_117.1321 Anthoceros agrestis HOM05D004814 ORTHO05D005778 1.1e-41 174.1 104 78.8
Mapoly0009s0107 Marchantia polymorpha HOM05D004814 ORTHO05D005778 6.9e-41 171.4 100 80.0
Pp3c24_19230 Physcomitrium patens HOM05D004814 ORTHO05D005778 4.5e-40 168.7 100 80.0
Pp3c8_18990 Physcomitrium patens HOM05D004814 ORTHO05D005778 1.7e-39 166.8 125 68.0
Pp3c20_8830 Physcomitrium patens HOM05D004814 ORTHO05D005778 4.2e-38 162.2 198 50.0
SEGI_32296 Sequoiadendron giganteum HOM05D004814 ORTHO05D005778 3.0e-36 156.0 101 74.3
MSTRG.13015 Avicennia marina HOM05D004814 ORTHO05D005778 9.7e-35 151.0 153 58.8
CBR_g19640 Chara braunii HOM05D004814 ORTHO05D005778 2.4e-33 146.4 206 46.1
SMO228G0012 Selaginella moellendorffii HOM05D004814 ORTHO05D005778 4.1e-33 145.6 102 65.7
MCO07G521 Micromonas commoda HOM05D004814 ORTHO05D005778 3.2e-30 136.0 117 55.6
PRCOL_00000430 Prasinoderma coloniale HOM05D004814 ORTHO05D005778 7.7e-24 114.8 100 52.0
Cre03.g195650 Chlamydomonas reinhardtii HOM05D004814 ORTHO05D005778 4.7e-21 105.5 125 44.8
vmacro17432 Vaccinium macrocarpon HOM05D004814 ORTHO05D005778 2.2e-10 70.1 198 35.4


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