Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN11G0211 Fragaria x ananassa HOM05D002376 ORTHO05D008821 1.8e-78 295.8 147 100.0
FvH4_3g40170 Fragaria vesca HOM05D002376 ORTHO05D008821 4.2e-59 231.5 121 99.2
FAN16G0225 Fragaria x ananassa HOM05D002376 ORTHO05D008821 1.6e-58 229.6 121 98.3
FAN21G3738 Fragaria x ananassa HOM05D002376 ORTHO05D008821 8.2e-55 217.2 121 94.2
RcHm_v2.0_Chr5g0072361 Rosa chinensis HOM05D002376 ORTHO05D008821 3.1e-46 188.7 121 83.5
Prupe.6G044100 Prunus persica HOM05D002376 ORTHO05D008821 7.2e-43 177.6 122 77.0
MD11G1061300 Malus domestica HOM05D002376 ORTHO05D008821 1.6e-42 176.4 122 76.2
CiPaw.13G066200 Carya illinoinensis HOM05D002376 ORTHO05D008821 8.8e-33 144.1 118 63.6
Manes.18G140300 Manihot esculenta HOM05D002376 ORTHO05D008821 2.6e-32 142.5 117 61.5
Cfa010938 Carpinus fangiana HOM05D002376 ORTHO05D008821 4.8e-31 138.3 117 59.8
QL03p067094 Quercus lobata HOM05D002376 ORTHO05D008821 3.1e-30 135.6 122 55.7
THA.LOC104800780 Tarenaya hassleriana HOM05D002376 ORTHO05D008821 4.1e-30 135.2 116 60.3
Thecc.09G361000 Theobroma cacao HOM05D002376 ORTHO05D008821 7.0e-30 134.4 115 59.1
COL.COLO4_11184 Corchorus olitorius HOM05D002376 ORTHO05D008821 4.5e-29 131.7 115 58.3
COL.COLO4_11185 Corchorus olitorius HOM05D002376 ORTHO05D008821 4.5e-29 131.7 115 58.3
TAR287G0002 Trochodendron aralioides HOM05D002376 ORTHO05D008821 4.5e-29 131.7 122 55.7
Rhsim13G0061900 Rhododendron simsii HOM05D002376 ORTHO05D008821 7.7e-29 131.0 121 56.2
CANSAT54G2364 Cannabis sativa HOM05D002376 ORTHO05D008821 1.0e-28 130.6 121 58.7
Haze_24442 Corylus avellana HOM05D002376 ORTHO05D008821 2.2e-28 129.4 117 54.7
Dinv12257 Davidia involucrata HOM05D002376 ORTHO05D008821 5.0e-28 128.3 119 57.1
Thhalv10017367m.g Eutrema salsugineum HOM05D002376 ORTHO05D008821 8.5e-28 127.5 112 57.1
Cpa.g.sc2.331 Carica papaya HOM05D002376 ORTHO05D008821 1.1e-27 127.1 104 57.7
TAR623G0666 Trochodendron aralioides HOM05D002376 ORTHO05D008821 1.1e-27 127.1 99 61.6
GSVIVG01024598001 Vitis vinifera HOM05D002376 ORTHO05D008821 1.5e-27 126.7 121 53.7
Eucgr.B04014 Eucalyptus grandis HOM05D002376 ORTHO05D008821 2.5e-27 125.9 124 54.0
Eucgr.B04017 Eucalyptus grandis HOM05D002376 ORTHO05D008821 2.5e-27 125.9 124 54.0
ClCG02G019170 Citrullus lanatus HOM05D002376 ORTHO05D008821 4.2e-27 125.2 118 54.2
HanXRQChr01g0012551 Helianthus annuus HOM05D002376 ORTHO05D008821 4.2e-27 125.2 99 61.6
BcaB01g04113 Brassica carinata HOM05D002376 ORTHO05D008821 5.5e-27 124.8 98 60.2
Duzib168G1911 Durio zibethinus HOM05D002376 ORTHO05D008821 5.5e-27 124.8 121 55.4
vmacro02895 Vaccinium macrocarpon HOM05D002376 ORTHO05D008821 5.5e-27 124.8 96 61.5
Carub.0004s1148 Capsella rubella HOM05D002376 ORTHO05D008821 9.4e-27 124.0 112 55.4
TWI75G1859 Tripterygium wilfordii HOM05D002376 ORTHO05D008821 9.4e-27 124.0 117 57.3
A03p16960 Brassica napus HOM05D002376 ORTHO05D004654 1.2e-26 123.6 98 59.2
CSS0028475 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 1.6e-26 123.2 119 58.0
CARHR123650 Cardamine hirsuta HOM05D002376 ORTHO05D008821 1.6e-26 123.2 116 54.3
Gohir.D03G144300 Gossypium hirsutum HOM05D002376 ORTHO05D008821 1.6e-26 123.2 118 55.9
Gorai.003G151600 Gossypium raimondii HOM05D002376 ORTHO05D008821 1.6e-26 123.2 118 55.9
Sc06g0008070 Simmondsia chinensis HOM05D002376 ORTHO05D008821 2.1e-26 122.9 123 51.2
AL4G25190 Arabidopsis lyrata HOM05D002376 ORTHO05D008821 2.7e-26 122.5 116 54.3
SGA_v2.0_scaffold77G25373 Striga asiatica HOM05D002376 ORTHO05D008821 2.7e-26 122.5 96 62.5
Lsat_1_v5_gn_5_175460 Lactuca sativa HOM05D002376 ORTHO05D008821 4.7e-26 121.7 107 59.8
LjContig00141g0012114 Lotus japonicus HOM05D002376 ORTHO05D008821 4.7e-26 121.7 97 60.8
Lj1A123G47 Lonicera japonica HOM05D002376 ORTHO05D008821 6.1e-26 121.3 97 59.8
BcaC01g05988 Brassica carinata HOM05D002376 ORTHO05D008821 1.0e-25 120.6 98 58.2
C03p19980 Brassica napus HOM05D002376 ORTHO05D004654 1.0e-25 120.6 98 58.2
BolC3t14376H Brassica oleracea HOM05D002376 ORTHO05D004654 1.0e-25 120.6 98 58.2
MELO3C025682.2 Cucumis melo HOM05D002376 ORTHO05D008821 1.4e-25 120.2 123 52.8
CsaV3_6G019000 Cucumis sativus L. HOM05D002376 ORTHO05D008821 1.4e-25 120.2 118 52.5
PGR102G2282 Punica granatum HOM05D002376 ORTHO05D008821 1.4e-25 120.2 122 55.7
CSS0017661 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 2.3e-25 119.4 100 57.0
Dinv28710 Davidia involucrata HOM05D002376 ORTHO05D008821 2.3e-25 119.4 100 59.0
Prupe.6G095400 Prunus persica HOM05D002376 ORTHO05D008821 2.3e-25 119.4 121 55.4
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 2.3e-25 119.4 99 58.6
Aa31LG5G6370 Aethionema arabicum HOM05D002376 ORTHO05D008821 3.0e-25 119.0 116 52.6
AT2G30330 Arabidopsis thaliana HOM05D002376 ORTHO05D008821 3.0e-25 119.0 98 58.2
Gohir.A03G024200 Gossypium hirsutum HOM05D002376 ORTHO05D008821 3.0e-25 119.0 118 54.2
CSS0003249 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 4.0e-25 118.6 96 58.3
Sp4g12890 Schrenkiella parvula HOM05D002376 ORTHO05D008821 6.8e-25 117.9 116 52.6
MD03G1059100 Malus domestica HOM05D002376 ORTHO05D008821 8.8e-25 117.5 127 56.7
arahy.Tifrunner.gnm1.ann1.6WW78Y Arachis hypogaea HOM05D002376 ORTHO05D008821 1.2e-24 117.1 121 52.1
Atru.chr6.2418 Acer truncatum HOM05D002376 ORTHO05D008821 1.5e-24 116.7 99 56.6
Migut.H01101 Erythranthe guttata HOM05D002376 ORTHO05D008821 2.0e-24 116.3 98 57.1
Phvul.008G249600 Phaseolus vulgaris HOM05D002376 ORTHO05D008821 2.6e-24 115.9 98 57.1
Glyma.02G234100 Glycine max HOM05D002376 ORTHO05D008821 3.4e-24 115.5 98 57.1
PSO170G0682 Papaver somniferum HOM05D002376 ORTHO05D008821 4.4e-24 115.2 94 57.4
Sed0011436 Sechium edule HOM05D002376 ORTHO05D008821 4.4e-24 115.2 118 50.8
arahy.Tifrunner.gnm1.ann1.F02FPT Arachis hypogaea HOM05D002376 ORTHO05D008821 5.7e-24 114.8 121 50.4
Lalb_Chr17g0345531 Lupinus albus HOM05D002376 ORTHO05D008821 7.5e-24 114.4 109 52.3
Nn4g26021 Nelumbo nucifera HOM05D002376 ORTHO05D008821 7.5e-24 114.4 96 56.2
Ca_05691_v3 Cicer arietinum L. HOM05D002376 ORTHO05D008821 9.8e-24 114.0 98 58.2
Actinidia23182 Actinidia chinensis HOM05D002376 ORTHO05D008821 1.3e-23 113.6 117 53.8
Sopen11g027160 Solanum pennellii HOM05D002376 ORTHO05D008821 1.3e-23 113.6 100 56.0
PSO017G2121 Papaver somniferum HOM05D002376 ORTHO05D008821 1.7e-23 113.2 94 58.5
Cc01_g09100 Coffea canephora HOM05D002376 ORTHO05D008821 2.2e-23 112.8 100 58.0
SalBow2G2295 Salvia bowleyana HOM05D002376 ORTHO05D008821 2.2e-23 112.8 100 52.0
Sabra13G0126300 Salix brachista HOM05D002376 ORTHO05D008821 6.3e-23 111.3 107 53.3
Solyc11g068450.2 Solanum lycopersicum HOM05D002376 ORTHO05D008821 6.3e-23 111.3 100 55.0
PGSC0003DMG400026358 Solanum tuberosum HOM05D002376 ORTHO05D008821 6.3e-23 111.3 100 54.0
DCAR_014464 Daucus carota HOM05D002376 ORTHO05D008821 1.1e-22 110.5 93 53.8
Oeu064671.1 Olea europaea HOM05D000883 ORTHO05D002942 1.1e-22 110.5 100 56.0
Peaxi162Scf00003g00413 Petunia axillaris HOM05D002376 ORTHO05D008821 1.1e-22 110.5 93 58.1
Potri.013G156700 Populus trichocarpa HOM05D002376 ORTHO05D008821 1.1e-22 110.5 101 57.4
TPR.G17753 Trifolium pratense HOM05D002376 ORTHO05D008821 1.1e-22 110.5 97 55.7
Aqoxy4G02143 Aquilegia oxysepala HOM05D002376 ORTHO05D008821 1.8e-22 109.8 97 53.6
Os11g0112300 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 2.4e-22 109.4 98 55.1
Hund18966 Selenicereus undatus HOM05D002376 ORTHO05D008821 2.4e-22 109.4 98 53.1
Ciclev10017044m.g Citrus clementina HOM05D002376 ORTHO05D008821 3.1e-22 109.0 94 54.3
SalBow2G0685 Salvia bowleyana HOM05D002376 ORTHO05D008821 3.1e-22 109.0 96 54.2
Medtr5g074880 Medicago truncatula HOM05D002376 ORTHO05D008821 7.0e-22 107.8 97 53.6
Nitab4.5_0000755g0130 Nicotiana tabacum HOM05D002376 ORTHO05D008821 1.6e-21 106.7 92 57.6
Nitab4.5_0009324g0020 Nicotiana tabacum HOM05D002376 ORTHO05D008821 1.6e-21 106.7 92 57.6
ATR0586G003 Amborella trichopoda HOM05D002376 ORTHO05D008821 5.9e-21 104.8 96 51.0
CDE06G1730 Ceratophyllum demersum HOM05D002376 ORTHO05D008821 7.7e-21 104.4 92 51.1
Lalb_Chr10g0103701 Lupinus albus HOM05D002376 ORTHO05D008821 7.7e-21 104.4 105 49.5
Os12g0416500 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 2.3e-20 102.8 90 55.6
HPP92_009016 Vanilla planifolia HOM05D002376 ORTHO05D008821 3.8e-20 102.1 98 48.0
unitig_22.g5204 Utricularia gibba HOM05D006159 ORTHO05D007624 8.6e-20 100.9 110 48.2
EL10Ac7g15863 Beta vulgaris HOM05D002376 ORTHO05D008821 1.5e-19 100.1 102 51.0
Eucgr.B02271 Eucalyptus grandis HOM05D002376 ORTHO05D008821 2.5e-19 99.4 77 62.3
Eucgr.L02725 Eucalyptus grandis HOM05D002376 ORTHO05D008821 2.5e-19 99.4 77 62.3
Psat2g052040 Pisum sativum HOM05D002376 ORTHO05D008821 5.5e-19 98.2 122 45.9
MBI15_g06972_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 7.2e-19 97.8 86 53.5
Ah.15g096510 Amaranthus hybridus HOM05D002376 ORTHO05D008821 1.2e-18 97.1 93 51.6
AUR62009722 Chenopodium quinoa HOM05D002376 ORTHO05D008821 2.8e-18 95.9 92 50.0
Pp3c20_8500 Physcomitrium patens HOM05D002376 ORTHO05D008821 1.4e-17 93.6 94 50.0
Os12g0111900 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 2.3e-17 92.8 98 50.0
AUR62036225 Chenopodium quinoa HOM05D002376 ORTHO05D008821 4.0e-17 92.0 92 48.9
Actinidia32596 Actinidia chinensis HOM05D002376 ORTHO05D008821 5.7e-16 88.2 74 60.8
Mapoly0069s0031 Marchantia polymorpha HOM05D002376 ORTHO05D008821 5.7e-16 88.2 94 44.7
Zm00001eb276260 Zea mays HOM05D002376 ORTHO05D008821 5.7e-16 88.2 71 60.6
AagrBONN_evm.TU.Sc2ySwM_228.448 Anthoceros agrestis HOM05D002376 ORTHO05D008821 1.7e-15 86.7 94 45.7
CAN.G1358.8 Capsicum annuum HOM05D002376 ORTHO05D008821 4.9e-15 85.1 70 61.4
SHI19244 Sapria himalayana HOM05D002376 ORTHO05D008821 1.1e-14 84.0 120 41.7
MBI07_g35969_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 1.7e-12 76.6 69 50.7
SMO361G0428 Selaginella moellendorffii HOM05D002376 ORTHO05D008821 1.5e-11 73.6 74 45.9
ECA248G3831 Erigeron canadensis HOM05D002376 ORTHO05D008821 1.9e-11 73.2 67 53.7
CBR_g4891 Chara braunii HOM05D006348 ORTHO05D008261 1.6e-10 70.1 86 34.9
MD03G1104100 Malus domestica HOM05D002376 ORTHO05D008821 8.3e-07 57.8 121 34.7


User provided reference genes

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