Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G3921 Fragaria x ananassa HOM05D002465 ORTHO05D008860 7.5e-181 637.1 334 100.0
FAN10G1848 Fragaria x ananassa HOM05D002465 ORTHO05D008860 3.2e-179 631.7 334 99.4
FAN03G2954 Fragaria x ananassa HOM05D002465 ORTHO05D008860 7.8e-178 627.1 334 98.2
FvH4_7g30420 Fragaria vesca HOM05D002465 ORTHO05D008860 2.3e-177 625.5 334 97.9
FAN06G0587 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.9e-176 622.5 334 97.6
FAN06G4105 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.6e-175 619.4 334 97.3
FAN01G0734 Fragaria x ananassa HOM05D002465 ORTHO05D008860 7.6e-173 610.5 334 96.7
Prupe.2G302000 Prunus persica HOM05D002465 ORTHO05D008860 1.4e-139 500.0 322 81.7
MD07G1279900 Malus domestica HOM05D002465 ORTHO05D008860 4.6e-138 495.0 335 79.1
CiPaw.05G261500 Carya illinoinensis HOM05D002465 ORTHO05D008860 4.5e-133 478.4 324 75.9
QL09p012523 Quercus lobata HOM05D002465 ORTHO05D008860 2.2e-132 476.1 322 76.1
Cfa016296 Carpinus fangiana HOM05D002465 ORTHO05D008860 5.0e-132 474.9 328 75.0
COL.COLO4_30296 Corchorus olitorius HOM05D002465 ORTHO05D008860 6.1e-130 468.0 332 74.1
Atru.chr1.341 Acer truncatum HOM05D002465 ORTHO05D008860 1.0e-129 467.2 347 70.9
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 1.1e-128 463.8 321 76.0
CANSAT21G1380 Cannabis sativa HOM05D002465 ORTHO05D008860 4.3e-128 461.8 334 73.4
Sabra04G0047800 Salix brachista HOM05D002465 ORTHO05D008860 8.2e-127 457.6 336 71.1
Duzib205G0883 Durio zibethinus HOM05D002465 ORTHO05D008860 1.1e-126 457.2 319 74.6
Thecc.03G185600 Theobroma cacao HOM05D002465 ORTHO05D008860 1.1e-126 457.2 330 73.0
Potri.004G072500 Populus trichocarpa HOM05D002465 ORTHO05D008860 5.3e-126 454.9 338 70.7
TWI23G0306 Tripterygium wilfordii HOM05D002465 ORTHO05D008860 7.7e-125 451.1 324 73.1
Ciclev10006645m.g Citrus clementina HOM05D002465 ORTHO05D008860 6.5e-124 448.0 333 71.5
Lalb_Chr02g0141271 Lupinus albus HOM05D002465 ORTHO05D008860 1.4e-123 446.8 341 69.2
Glyma.20G163100 Glycine max HOM05D002465 ORTHO05D008860 7.2e-123 444.5 325 71.1
Cpa.g.sc107.122 Carica papaya HOM05D002465 ORTHO05D008860 2.7e-122 442.6 315 71.7
Medtr1g099620 Medicago truncatula HOM05D002465 ORTHO05D008860 3.6e-122 442.2 321 70.7
VMungo0720G1208 Vigna mungo HOM05D002465 ORTHO05D008860 7.9e-122 441.0 321 70.7
Lj5g0014102 Lotus japonicus HOM05D002465 ORTHO05D008860 1.4e-121 440.3 321 71.7
Gohir.D12G255800 Gossypium hirsutum HOM05D002465 ORTHO05D008860 3.9e-121 438.7 320 70.6
Psat6g195800 Pisum sativum HOM05D002465 ORTHO05D008860 8.8e-121 437.6 326 69.0
Gorai.008G273900 Gossypium raimondii HOM05D002465 ORTHO05D008860 1.1e-120 437.2 320 70.6
Gohir.A12G253500 Gossypium hirsutum HOM05D002465 ORTHO05D008860 4.3e-120 435.3 320 70.0
Manes.14G021500 Manihot esculenta HOM05D002465 ORTHO05D008860 7.4e-120 434.5 331 70.7
Ca_10714_v3 Cicer arietinum L. HOM05D002465 ORTHO05D008860 1.1e-118 430.6 323 69.3
Phvul.007G075300 Phaseolus vulgaris HOM05D002465 ORTHO05D008860 3.1e-118 429.1 329 67.8
Sed0017948 Sechium edule HOM05D002465 ORTHO05D008860 5.3e-118 428.3 317 69.7
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea HOM05D002465 ORTHO05D008860 9.1e-118 427.6 330 69.1
TPR.G7770 Trifolium pratense HOM05D002465 ORTHO05D008860 1.5e-117 426.8 324 68.2
QL09p012480 Quercus lobata HOM05D002465 ORTHO05D008860 2.6e-117 426.0 322 69.9
DCAR_014522 Daucus carota HOM05D002465 ORTHO05D008860 4.5e-117 425.2 324 68.8
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 1.0e-116 424.1 317 68.5
Thhalv10014103m.g Eutrema salsugineum HOM05D002465 ORTHO05D008860 1.0e-116 424.1 322 67.7
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 1.3e-116 423.7 317 68.1
AL8G27240 Arabidopsis lyrata HOM05D002465 ORTHO05D008860 2.2e-116 422.9 322 66.5
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 2.9e-116 422.5 317 67.8
ClCG05G008460 Citrullus lanatus HOM05D002465 ORTHO05D008860 3.8e-116 422.2 318 69.5
BcaB05g21982 Brassica carinata HOM05D002465 ORTHO05D008860 6.5e-116 421.4 322 66.8
AT5G52810 Arabidopsis thaliana HOM05D002465 ORTHO05D008860 1.1e-115 420.6 321 65.7
PGSC0003DMG400037424 Solanum tuberosum HOM05D002465 ORTHO05D008860 1.9e-115 419.9 321 66.4
PGSC0003DMG402028895 Solanum tuberosum HOM05D002465 ORTHO05D008860 1.9e-115 419.9 321 66.4
CAN.G204.25 Capsicum annuum HOM05D002465 ORTHO05D008860 4.2e-115 418.7 326 66.3
PGR142G3674 Punica granatum HOM05D002465 ORTHO05D008860 5.5e-115 418.3 336 68.5
THA.LOC104811948 Tarenaya hassleriana HOM05D002465 ORTHO05D008860 5.5e-115 418.3 342 63.5
CARHR265740 Cardamine hirsuta HOM05D002465 ORTHO05D008860 1.2e-114 417.2 320 66.6
CsaV3_3G017540 Cucumis sativus L. HOM05D002465 ORTHO05D008860 2.1e-114 416.4 316 68.0
CSS0010708 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D008860 1.4e-113 413.7 325 67.1
Aa31LG3G9050 Aethionema arabicum HOM05D002465 ORTHO05D008860 3.9e-113 412.1 320 66.2
MELO3C006954.2 Cucumis melo HOM05D002465 ORTHO05D008860 8.8e-113 411.0 316 67.1
Sopen06g012110 Solanum pennellii HOM05D002465 ORTHO05D008860 2.0e-112 409.8 330 63.3
Cc02_g02280 Coffea canephora HOM05D002465 ORTHO05D008860 5.7e-112 408.3 324 67.0
Solyc06g036330.1 Solanum lycopersicum HOM05D002465 ORTHO05D008860 5.7e-112 408.3 330 63.0
Ah.07g206480 Amaranthus hybridus HOM05D002465 ORTHO05D008860 6.3e-111 404.8 319 66.1
Dinv35265 Davidia involucrata HOM05D002465 ORTHO05D008860 6.3e-111 404.8 301 69.4
AUR62031433 Chenopodium quinoa HOM05D002465 ORTHO05D008860 1.4e-110 403.7 318 66.7
EL10Ac3g05401 Beta vulgaris HOM05D002465 ORTHO05D008860 1.8e-110 403.3 327 65.4
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 7.0e-110 401.4 303 68.0
BcaC03g14498 Brassica carinata HOM05D002465 ORTHO05D008860 9.1e-110 401.0 320 65.3
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 8.5e-108 394.4 305 65.9
Migut.F01082 Erythranthe guttata HOM05D002465 ORTHO05D008860 9.4e-107 391.0 319 64.9
MBI11_g09066_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D008860 2.7e-106 389.4 317 64.4
Aqoxy5G00658 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 3.6e-106 389.0 320 64.1
SalBow2G2390 Salvia bowleyana HOM05D002465 ORTHO05D008860 1.4e-105 387.1 326 62.9
Nn6g32108 Nelumbo nucifera HOM05D002465 ORTHO05D008860 8.8e-105 384.4 318 61.9
Nn6g32109 Nelumbo nucifera HOM05D002465 ORTHO05D008860 8.8e-105 384.4 318 61.9
Peaxi162Scf00618g00066 Petunia axillaris HOM05D002465 ORTHO05D008860 5.7e-104 381.7 268 72.4
Sc13g0009250 Simmondsia chinensis HOM05D002465 ORTHO05D008860 5.7e-104 381.7 329 61.7
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea HOM05D002465 ORTHO05D008860 1.7e-103 380.2 327 64.2
Nitab4.5_0004854g0030 Nicotiana tabacum HOM05D002465 ORTHO05D008860 1.1e-102 377.5 299 64.9
PSO478G0039 Papaver somniferum HOM05D002465 ORTHO05D008860 9.1e-102 374.4 321 59.8
Lsat_1_v5_gn_2_131440 Lactuca sativa HOM05D002465 ORTHO05D008860 2.0e-101 373.2 317 62.8
HanXRQChr07g0206921 Helianthus annuus HOM05D002465 ORTHO05D008860 1.6e-98 363.6 319 59.6
AUR62021108 Chenopodium quinoa HOM05D002465 ORTHO05D008860 8.0e-98 361.3 265 70.6
SGA_v2.0_scaffold10G05284 Striga asiatica HOM05D002465 ORTHO05D008860 9.8e-96 354.4 332 58.4
ECA238G0507 Erigeron canadensis HOM05D002465 ORTHO05D008860 1.4e-94 350.5 323 58.2
TAR374G0466 Trochodendron aralioides HOM05D002465 ORTHO05D008860 9.1e-94 347.8 322 57.8
Eucgr.L01486 Eucalyptus grandis HOM05D002465 ORTHO05D008860 2.5e-91 339.7 335 59.4
vmacro06619 Vaccinium macrocarpon HOM05D002465 ORTHO05D008860 8.0e-90 334.7 323 57.6
Nitab4.5_0016317g0010 Nicotiana tabacum HOM05D002465 ORTHO05D008860 5.2e-89 332.0 238 69.7
RcHm_v2.0_Chr1g0378551 Rosa chinensis HOM05D002465 ORTHO05D008860 6.3e-87 325.1 191 90.1
Os10g0533200 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D008860 1.7e-84 317.0 335 54.3
unitig_26.g10201 Utricularia gibba HOM05D002465 ORTHO05D008860 6.6e-84 315.1 279 60.2
SEGI_38444 Sequoiadendron giganteum HOM05D002465 ORTHO05D008860 2.0e-80 303.5 326 53.1
ATR0661G059 Amborella trichopoda HOM05D002465 ORTHO05D008860 3.7e-79 299.3 340 50.9
Zm00001eb021880 Zea mays HOM05D002465 ORTHO05D008860 1.4e-78 297.4 323 52.9
Glyma.10G230300 Glycine max HOM05D002465 ORTHO05D008860 3.2e-78 296.2 288 58.3
CDE07G0391 Ceratophyllum demersum HOM05D002465 ORTHO05D008860 1.7e-71 273.9 319 47.6
Mapoly0033s0116 Marchantia polymorpha HOM05D002465 ORTHO05D008860 4.7e-66 255.8 319 46.4
Carub.0008s1297 Capsella rubella HOM05D002465 ORTHO05D008860 1.5e-64 250.8 189 65.6
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 1.7e-63 247.3 229 61.6
HPP92_015083 Vanilla planifolia HOM05D002465 ORTHO05D008860 2.2e-63 246.9 320 48.4
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 1.4e-62 244.2 205 63.4
CANSAT01G1695 Cannabis sativa HOM05D002465 ORTHO05D008860 3.3e-59 233.0 162 76.5
HPP92_028539 Vanilla planifolia HOM05D002465 ORTHO05D008860 2.4e-54 216.9 201 58.7
AagrBONN_evm.TU.Sc2ySwM_362.356 Anthoceros agrestis HOM05D002465 ORTHO05D008860 3.5e-45 186.4 254 45.7
Aqoxy5G00661 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 1.4e-41 174.5 109 78.9
Aqoxy5G00666 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 1.5e-40 171.0 109 78.0
Cfa016297 Carpinus fangiana HOM05D002465 ORTHO05D008860 3.1e-33 146.7 89 80.9
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 3.7e-26 123.2 276 28.3
GSVIVG01028828001 Vitis vinifera HOM05D002465 ORTHO05D008860 6.0e-21 105.9 110 53.6
Pp3c1_3280 Physcomitrium patens HOM05D002465 ORTHO05D008860 1.5e-19 101.3 124 44.4
Actinidia34162 Actinidia chinensis HOM05D002465 ORTHO05D008860 2.9e-15 87.0 69 68.1
Cfa016299 Carpinus fangiana HOM05D002465 ORTHO05D008860 2.6e-08 63.9 79 50.6


User provided reference genes

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