Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G3616 Fragaria x ananassa HOM05D004048 ORTHO05D004859 6.1e-208 727.2 370 100.0
FvH4_7g15371 Fragaria vesca HOM05D004048 ORTHO05D004859 5.3e-159 564.7 361 83.7
RcHm_v2.0_Chr1g0357711 Rosa chinensis HOM05D004048 ORTHO05D004859 1.5e-142 510.0 376 74.5
FvH4_7g15370 Fragaria vesca HOM05D004048 ORTHO05D004859 6.5e-133 478.0 388 68.3
RcHm_v2.0_Chr1g0357691 Rosa chinensis HOM05D004048 ORTHO05D004859 6.5e-133 478.0 386 68.4
FAN06G1753 Fragaria x ananassa HOM05D004048 ORTHO05D004859 1.4e-132 476.9 388 68.0
FAN10G1698 Fragaria x ananassa HOM05D004048 ORTHO05D004859 1.4e-132 476.9 388 68.3
FAN10G3606 Fragaria x ananassa HOM05D004048 ORTHO05D004859 1.4e-132 476.9 388 68.3
FAN03G0096 Fragaria x ananassa HOM05D004048 ORTHO05D004859 6.1e-131 471.5 388 67.5
Prupe.2G177600 Prunus persica HOM05D004048 ORTHO05D004859 3.0e-130 469.2 385 66.5
Rhsim07G0205800 Rhododendron simsii HOM05D004048 ORTHO05D004859 2.0e-129 466.5 372 67.7
FAN06G0189 Fragaria x ananassa HOM05D004048 ORTHO05D004859 4.3e-129 465.3 405 65.4
MD07G1131200 Malus domestica HOM05D004048 ORTHO05D004859 2.8e-128 462.6 363 68.0
FAN06G1997 Fragaria x ananassa HOM05D004048 ORTHO05D004859 1.8e-127 459.9 387 69.5
vmacro13227 Vaccinium macrocarpon HOM05D004048 ORTHO05D004859 2.0e-126 456.4 362 66.9
Dinv32522 Davidia involucrata HOM05D004048 ORTHO05D004859 3.8e-125 452.2 368 66.8
AL5G43890 Arabidopsis lyrata HOM05D004048 ORTHO05D004859 9.4e-124 447.6 367 65.9
Sp5g01880 Schrenkiella parvula HOM05D004048 ORTHO05D004859 9.4e-124 447.6 373 64.9
Hund27241 Selenicereus undatus HOM05D004048 ORTHO05D004859 9.4e-124 447.6 364 65.7
Ciclev10020577m.g Citrus clementina HOM05D004048 ORTHO05D004859 1.6e-123 446.8 367 64.3
CSS0029554 Camellia sinensis var. sinensis HOM05D004048 ORTHO05D004859 2.7e-123 446.0 381 64.6
CSS0027402 Camellia sinensis var. sinensis HOM05D004048 ORTHO05D004859 3.6e-123 445.7 381 64.3
Manes.05G029300 Manihot esculenta HOM05D004048 ORTHO05D004859 3.6e-123 445.7 366 64.8
Haze_15565 Corylus avellana HOM05D004048 ORTHO05D004859 7.9e-123 444.5 384 63.5
BcaC08g45130 Brassica carinata HOM05D004048 ORTHO05D004859 1.0e-122 444.1 367 65.7
BcaB02g07374 Brassica carinata HOM05D004048 ORTHO05D004859 1.4e-122 443.7 372 64.5
BolC6t37921H Brassica oleracea HOM05D004048 ORTHO05D004859 2.3e-122 443.0 367 65.4
BraA07t30196Z Brassica rapa HOM05D004048 ORTHO05D004859 2.3e-122 443.0 367 65.4
AT3G61530 Arabidopsis thaliana HOM05D004048 ORTHO05D004859 3.0e-122 442.6 366 65.3
QL04p055532 Quercus lobata HOM05D004048 ORTHO05D004859 3.9e-122 442.2 367 63.8
A07p25550 Brassica napus HOM05D004048 ORTHO05D004859 5.1e-122 441.8 367 65.1
Aa31LG10G15450 Aethionema arabicum HOM05D004048 ORTHO05D004859 6.7e-122 441.4 378 63.8
C06p27540 Brassica napus HOM05D004048 ORTHO05D004859 6.7e-122 441.4 367 65.1
PGR004G0897 Punica granatum HOM05D004048 ORTHO05D004859 6.7e-122 441.4 366 65.0
Thecc.01G352400 Theobroma cacao HOM05D004048 ORTHO05D004859 8.8e-122 441.0 365 64.1
COL.COLO4_12778 Corchorus olitorius HOM05D004048 ORTHO05D004859 1.1e-121 440.7 383 63.2
Cc02_g21240 Coffea canephora HOM05D004048 ORTHO05D004859 1.5e-121 440.3 358 65.6
Duzib268G0835 Durio zibethinus HOM05D004048 ORTHO05D004859 1.5e-121 440.3 373 61.7
HanXRQChr17g0562171 Helianthus annuus HOM05D004048 ORTHO05D004859 1.5e-121 440.3 365 65.2
DCAR_025214 Daucus carota HOM05D004048 ORTHO05D004859 2.0e-121 439.9 367 62.9
Atru.chr7.1494 Acer truncatum HOM05D004048 ORTHO05D004859 2.6e-121 439.5 363 62.8
EL10Ac1g00354 Beta vulgaris HOM05D004048 ORTHO05D004859 2.6e-121 439.5 370 63.8
Lj9C589T5 Lonicera japonica HOM05D004048 ORTHO05D004859 2.6e-121 439.5 359 64.1
TWI23G0617 Tripterygium wilfordii HOM05D004048 ORTHO05D004859 2.6e-121 439.5 359 65.7
Migut.B01799 Erythranthe guttata HOM05D004048 ORTHO05D004859 3.3e-121 439.1 366 65.3
THA.LOC104817317 Tarenaya hassleriana HOM05D004048 ORTHO05D004859 3.3e-121 439.1 375 63.5
Potri.014G090500 Populus trichocarpa HOM05D004048 ORTHO05D004859 4.4e-121 438.7 367 64.0
AT2G46110 Arabidopsis thaliana HOM05D004048 ORTHO05D004859 5.7e-121 438.3 370 63.5
Thhalv10001521m.g Eutrema salsugineum HOM05D004048 ORTHO05D004859 1.3e-120 437.2 371 63.1
PSO170G0644 Papaver somniferum HOM05D004048 ORTHO05D004859 1.3e-120 437.2 363 63.9
Carub.0004s2881 Capsella rubella HOM05D004048 ORTHO05D004859 2.2e-120 436.4 370 63.2
Sp4g28180 Schrenkiella parvula HOM05D004048 ORTHO05D004859 2.8e-120 436.0 371 63.1
Eucgr.B01988 Eucalyptus grandis HOM05D004048 ORTHO05D004859 3.7e-120 435.6 364 64.3
MBI03_g34597_MAGBIO Magnolia biondii HOM05D004048 ORTHO05D004859 4.8e-120 435.3 370 64.3
Actinidia10075 Actinidia chinensis HOM05D004048 ORTHO05D004859 6.3e-120 434.9 365 64.7
BcaC07g40651 Brassica carinata HOM05D004048 ORTHO05D004859 6.3e-120 434.9 361 64.0
A09p53600 Brassica napus HOM05D004048 ORTHO05D004859 6.3e-120 434.9 365 64.1
BolC8t51222H Brassica oleracea HOM05D004048 ORTHO05D004859 6.3e-120 434.9 361 64.0
Nitab4.5_0005222g0030 Nicotiana tabacum HOM05D004048 ORTHO05D004859 6.3e-120 434.9 356 64.9
Sc01g0003210 Simmondsia chinensis HOM05D004048 ORTHO05D004859 6.3e-120 434.9 364 63.2
AUR62004413 Chenopodium quinoa HOM05D004048 ORTHO05D004859 8.2e-120 434.5 365 63.6
TAR375G1056 Trochodendron aralioides HOM05D004048 ORTHO05D004859 8.2e-120 434.5 363 65.3
Nn1g01686 Nelumbo nucifera HOM05D004048 ORTHO05D004859 1.1e-119 434.1 371 64.2
Sabra14G0065600 Salix brachista HOM05D004048 ORTHO05D004859 1.4e-119 433.7 367 63.5
C08p36390 Brassica napus HOM05D004048 ORTHO05D004859 2.4e-119 433.0 365 63.8
Carub.0005s2822 Capsella rubella HOM05D004048 ORTHO05D004859 3.1e-119 432.6 366 64.5
CAN.G439.29 Capsicum annuum HOM05D004048 ORTHO05D004859 3.1e-119 432.6 364 63.7
Gohir.D08G043100 Gossypium hirsutum HOM05D004048 ORTHO05D004859 3.1e-119 432.6 366 63.4
PSO063G1481 Papaver somniferum HOM05D004048 ORTHO05D004859 3.1e-119 432.6 360 63.9
Gohir.A08G032200 Gossypium hirsutum HOM05D004048 ORTHO05D004859 4.1e-119 432.2 366 63.4
CiPaw.02G034800 Carya illinoinensis HOM05D004048 ORTHO05D004859 5.3e-119 431.8 376 61.7
BraA09t40782Z Brassica rapa HOM05D004048 ORTHO05D004859 7.0e-119 431.4 365 64.4
Gorai.004G041700 Gossypium raimondii HOM05D004048 ORTHO05D004859 7.0e-119 431.4 366 63.4
Hma1.2p1_0335F.1_g128890 Hydrangea macrophylla HOM05D004048 ORTHO05D004859 9.1e-119 431.0 365 62.2
Aqoxy5G04084 Aquilegia oxysepala HOM05D004048 ORTHO05D004859 2.0e-118 429.9 364 63.2
Gohir.D08G154300 Gossypium hirsutum HOM05D004048 ORTHO05D004859 2.6e-118 429.5 364 62.9
Gorai.004G160400 Gossypium raimondii HOM05D004048 ORTHO05D004859 2.6e-118 429.5 364 62.9
Glyma.07G064600 Glycine max HOM05D004048 ORTHO05D004859 4.5e-118 428.7 366 63.1
Nitab4.5_0000615g0020 Nicotiana tabacum HOM05D004048 ORTHO05D004859 4.5e-118 428.7 366 62.8
VMungo0331G0386 Vigna mungo HOM05D004048 ORTHO05D004859 7.7e-118 427.9 375 62.1
Peaxi162Scf00217g00711 Petunia axillaris HOM05D004048 ORTHO05D004859 1.0e-117 427.6 366 63.4
SGA_v2.0_scaffold4G02279 Striga asiatica HOM05D004048 ORTHO05D004859 1.3e-117 427.2 361 63.4
Lsat_1_v5_gn_4_35260 Lactuca sativa HOM05D004048 ORTHO05D004859 2.2e-117 426.4 354 64.1
CsaV3_7G025860 Cucumis sativus L. HOM05D004048 ORTHO05D004859 2.9e-117 426.0 360 63.6
PGSC0003DMG400002011 Solanum tuberosum HOM05D004048 ORTHO05D004859 6.5e-117 424.9 364 62.4
arahy.Tifrunner.gnm1.ann1.9CR96V Arachis hypogaea HOM05D004048 ORTHO05D004859 1.1e-116 424.1 367 62.4
Solyc09g007130.3 Solanum lycopersicum HOM05D004048 ORTHO05D004859 1.5e-116 423.7 360 62.5
Lalb_Chr17g0338041 Lupinus albus HOM05D004048 ORTHO05D004859 2.5e-116 422.9 366 62.6
Lj1g0027864 Lotus japonicus HOM05D004048 ORTHO05D004859 4.2e-116 422.2 366 63.1
arahy.Tifrunner.gnm1.ann1.8BBS1S Arachis hypogaea HOM05D004048 ORTHO05D004859 5.5e-116 421.8 367 62.1
Lj5g0009706 Lotus japonicus HOM05D004048 ORTHO05D004859 7.2e-116 421.4 366 63.7
CANSAT56G4107 Cannabis sativa HOM05D004048 ORTHO05D004859 2.7e-115 419.5 364 62.4
Ca_03490_v3 Cicer arietinum L. HOM05D004048 ORTHO05D004859 2.3e-114 416.4 380 61.3
MELO3C014805.2 Cucumis melo HOM05D004048 ORTHO05D004859 1.1e-113 414.1 354 62.1
arahy.Tifrunner.gnm1.ann1.8G3C0P Arachis hypogaea HOM05D004048 ORTHO05D004859 1.5e-113 413.7 378 59.8
Duzib138G1147 Durio zibethinus HOM05D004048 ORTHO05D004859 1.5e-113 413.7 402 57.0
Rhsim07G0206900 Rhododendron simsii HOM05D004048 ORTHO05D004859 2.6e-113 412.9 385 60.3
Medtr8g028555 Medicago truncatula HOM05D004048 ORTHO05D004859 5.7e-113 411.8 364 62.4
TPR.G28287 Trifolium pratense HOM05D004048 ORTHO05D004859 1.3e-112 410.6 368 61.7
BcaC07g40671 Brassica carinata HOM05D004048 ORTHO05D004859 1.7e-112 410.2 368 61.1
MELO3C012767.2 Cucumis melo HOM05D004048 ORTHO05D004859 1.1e-111 407.5 390 59.0
Psat4g156920 Pisum sativum HOM05D004048 ORTHO05D004859 1.1e-111 407.5 368 61.7
TPR.G37181 Trifolium pratense HOM05D004048 ORTHO05D004859 1.1e-111 407.5 364 60.4
Rhsim07G0010400 Rhododendron simsii HOM05D004048 ORTHO05D004859 1.2e-110 404.1 364 61.5
HPP92_005267 Vanilla planifolia HOM05D004048 ORTHO05D004859 1.3e-109 400.6 366 59.6
AUR62022619 Chenopodium quinoa HOM05D004048 ORTHO05D004859 8.5e-109 397.9 336 63.1
SEGI_12250 Sequoiadendron giganteum HOM05D004048 ORTHO05D004859 1.9e-108 396.7 364 58.8
Oeu054354.2 Olea europaea HOM05D004048 ORTHO05D004859 2.5e-108 396.4 404 55.7
Sopen09g002000 Solanum pennellii HOM05D004048 ORTHO05D004859 8.0e-107 391.3 328 63.4
Phvul.010G104900 Phaseolus vulgaris HOM05D004048 ORTHO05D004859 5.7e-105 385.2 322 65.2
CARHR107270 Cardamine hirsuta HOM05D004048 ORTHO05D004859 2.2e-104 383.3 368 59.0
FAN10G1509 Fragaria x ananassa HOM05D004048 ORTHO05D004859 2.2e-104 383.3 203 98.0
unitig_60.g25627 Utricularia gibba HOM05D004048 ORTHO05D004859 7.0e-103 378.3 364 59.9
ClCG09G009090 Citrullus lanatus HOM05D004048 ORTHO05D004859 1.2e-102 377.5 361 58.4
Ah.05g180160 Amaranthus hybridus HOM05D004048 ORTHO05D004859 2.7e-102 376.3 369 58.5
BcaC07g42671 Brassica carinata HOM05D004048 ORTHO05D004859 1.2e-97 360.9 372 54.8
Glyma.09G254700 Glycine max HOM05D004048 ORTHO05D004859 1.2e-97 360.9 362 56.6
Mapoly0035s0043 Marchantia polymorpha HOM05D004048 ORTHO05D004859 1.8e-95 353.6 357 55.2
AagrBONN_evm.TU.Sc2ySwM_117.1042 Anthoceros agrestis HOM05D004048 ORTHO05D004859 9.1e-95 351.3 360 55.8
AagrBONN_evm.TU.Sc2ySwM_117.2358 Anthoceros agrestis HOM05D004048 ORTHO05D004859 9.1e-95 351.3 360 55.8
GSVIVG01026967001 Vitis vinifera HOM05D004048 ORTHO05D004859 1.2e-94 350.9 297 63.6
Pp3c7_220 Physcomitrium patens HOM05D004048 ORTHO05D004859 5.9e-94 348.6 363 54.3
SMO144G0210 Selaginella moellendorffii HOM05D004048 ORTHO05D004859 7.7e-94 348.2 361 53.5
Cpa.g.sc11.73 Carica papaya HOM05D004048 ORTHO05D004859 8.6e-93 344.7 371 55.3
Os01g0225500 Oryza sativa ssp. japonica HOM05D004048 ORTHO05D004859 3.6e-91 339.3 345 54.2
MCO13G154 Micromonas commoda HOM05D004048 ORTHO05D004859 1.8e-90 337.0 364 53.6
ECA234G0147 Erigeron canadensis HOM05D004048 ORTHO05D004859 2.3e-90 336.7 317 60.3
Medtr4g037305 Medicago truncatula HOM05D004048 ORTHO05D004859 1.3e-88 330.9 231 73.6
Gohir.A08G133000 Gossypium hirsutum HOM05D004048 ORTHO05D004859 4.1e-87 325.9 228 72.4
Cre12.g508550 Chlamydomonas reinhardtii HOM05D004048 ORTHO05D004859 2.0e-86 323.6 366 49.7
CBR_g45417 Chara braunii HOM05D004048 ORTHO05D004859 1.0e-85 321.2 342 52.0
CDE11G0110 Ceratophyllum demersum HOM05D004048 ORTHO05D004859 1.3e-85 320.9 227 71.8
FAN06G4041 Fragaria x ananassa HOM05D004048 ORTHO05D004859 2.3e-85 320.1 306 63.1
AL4G45340 Arabidopsis lyrata HOM05D004048 ORTHO05D004859 4.3e-84 315.8 200 77.5
Eucgr.B01984 Eucalyptus grandis HOM05D004048 ORTHO05D004859 9.8e-81 304.7 388 47.9
SMO356G0035 Selaginella moellendorffii HOM05D004048 ORTHO05D004859 9.2e-79 298.1 335 51.9
SMO119G0299 Selaginella moellendorffii HOM05D004048 ORTHO05D004859 8.6e-77 291.6 300 54.0
Zm00001eb339000 Zea mays HOM05D004048 ORTHO05D004859 1.6e-75 287.3 278 62.2
Nn6g32447 Nelumbo nucifera HOM05D004048 ORTHO05D004859 8.9e-74 281.6 363 47.4
ATR0751G082 Amborella trichopoda HOM05D004048 ORTHO05D004859 7.5e-73 278.5 281 57.7
SEGI_21771 Sequoiadendron giganteum HOM05D004048 ORTHO05D004859 8.6e-69 265.0 280 56.4
PRCOL_00005166 Prasinoderma coloniale HOM05D004048 ORTHO05D004859 2.8e-67 260.0 364 44.0
ATR0751G137 Amborella trichopoda HOM05D004048 ORTHO05D004859 5.8e-65 252.3 271 55.4
SEGI_25526 Sequoiadendron giganteum HOM05D004048 ORTHO05D004859 1.8e-58 230.7 161 70.2
Eucgr.B01986 Eucalyptus grandis HOM05D004048 ORTHO05D004859 4.9e-56 222.6 316 45.3
PGSC0003DMG400018716 Solanum tuberosum HOM05D004048 ORTHO05D004859 3.3e-52 209.9 130 76.2
TPR.G28294 Trifolium pratense HOM05D004048 ORTHO05D004859 3.1e-50 203.4 252 49.2
Os01g0225400 Oryza sativa ssp. japonica HOM05D004048 ORTHO05D004859 5.8e-49 199.1 126 75.4
Cfa003872 Carpinus fangiana HOM05D004048 ORTHO05D004859 4.3e-44 183.0 374 38.0
Medtr4g037245 Medicago truncatula HOM05D004048 ORTHO05D004859 2.1e-43 180.6 237 50.6
Cfa001640 Carpinus fangiana HOM05D004048 ORTHO05D004859 3.2e-39 166.8 314 37.9
FAN01G2460 Fragaria x ananassa HOM05D004048 ORTHO05D004859 1.3e-37 161.4 99 77.8
Lj6g0001313 Lotus japonicus HOM05D004048 ORTHO05D004859 7.4e-36 155.6 102 70.6
FAN10G2371 Fragaria x ananassa HOM05D004048 ORTHO05D038698 1.6e-35 154.5 79 98.7
Medtr4g037315 Medicago truncatula HOM05D004048 ORTHO05D004859 1.0e-32 145.2 103 66.0
Ca_03489_v3 Cicer arietinum L. HOM05D004048 ORTHO05D004859 1.4e-31 141.4 110 69.1
Haze_27487 Corylus avellana HOM05D004048 ORTHO05D004859 8.7e-29 132.1 265 32.1
arahy.Tifrunner.gnm1.ann1.63JPLQ Arachis hypogaea HOM05D004048 ORTHO05D004859 1.6e-27 127.9 86 68.6
arahy.Tifrunner.gnm1.ann1.CIF5FW Arachis hypogaea HOM05D004048 ORTHO05D004859 7.6e-25 119.0 176 40.3
Actinidia20163 Actinidia chinensis HOM05D004048 ORTHO05D004859 1.7e-24 117.9 184 45.1
Haze_26957 Corylus avellana HOM05D005470 ORTHO05D006855 1.4e-23 114.8 241 37.3
SHI16536 Sapria himalayana HOM05D004048 ORTHO05D004859 9.3e-23 112.1 83 66.3
arahy.Tifrunner.gnm1.ann1.DMYH1R Arachis hypogaea HOM05D004048 ORTHO05D004859 9.7e-20 102.1 77 62.3
ATR0751G274 Amborella trichopoda HOM05D004048 ORTHO05D004859 3.7e-19 100.1 73 61.6
Potri.002G164601 Populus trichocarpa HOM05D004048 ORTHO05D004859 6.3e-19 99.4 79 57.0
SGA_v2.0_scaffold4G02383 Striga asiatica HOM05D004048 ORTHO05D051375 4.1e-18 96.7 54 92.6
MBI12_g43904_MAGBIO Magnolia biondii HOM05D004048 ORTHO05D004859 2.0e-17 94.4 61 75.4
HanXRQChr15g0474641 Helianthus annuus HOM05D004048 ORTHO05D004859 4.5e-17 93.2 62 77.4
AL4G45350 Arabidopsis lyrata HOM05D004048 ORTHO05D038698 3.2e-15 87.0 62 69.4
DCAR_025216 Daucus carota HOM05D003118 ORTHO05D003618 5.5e-15 86.3 78 64.1
MBI17_g16531_MAGBIO Magnolia biondii HOM05D004048 ORTHO05D004859 4.3e-12 76.6 138 38.4
CAN.G439.28 Capsicum annuum HOM05D004048 ORTHO05D004859 1.3e-11 75.1 51 66.7
Medtr4g037275 Medicago truncatula HOM05D004048 ORTHO05D004859 2.6e-09 67.4 41 73.2


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