Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G3279 Fragaria x ananassa HOM05D001604 ORTHO05D001432 3.3e-53 211.5 107 100.0
FAN06G0344 Fragaria x ananassa HOM05D001604 ORTHO05D001432 2.6e-50 201.8 100 100.0
FAN06G2348 Fragaria x ananassa HOM05D001604 ORTHO05D001432 2.6e-50 201.8 100 100.0
FAN03G1456 Fragaria x ananassa HOM05D001604 ORTHO05D001432 2.2e-49 198.7 100 98.0
FAN10G0094 Fragaria x ananassa HOM05D001604 ORTHO05D001432 1.4e-48 196.1 100 98.0
FvH4_7g14230 Fragaria vesca HOM05D001604 ORTHO05D001432 7.1e-48 193.7 100 95.0
FAN01G1009 Fragaria x ananassa HOM05D001604 ORTHO05D001432 1.6e-47 192.6 100 97.0
RcHm_v2.0_Chr1g0355211 Rosa chinensis HOM05D001604 ORTHO05D001432 8.4e-41 170.2 100 86.0
Prupe.2G170100 Prunus persica HOM05D001604 ORTHO05D001432 1.9e-24 115.9 105 59.0
MD07G1137500 Malus domestica HOM05D001604 ORTHO05D001432 7.1e-24 114.0 107 58.9
MD01G1060200 Malus domestica HOM05D001604 ORTHO05D001432 8.7e-22 107.1 106 57.5
Potri.014G083900 Populus trichocarpa HOM05D001604 ORTHO05D001432 4.2e-16 88.2 108 50.0
CiPaw.01G060900 Carya illinoinensis HOM05D001604 ORTHO05D001432 1.6e-15 86.3 109 50.5
Ciclev10019219m.g Citrus clementina HOM05D001604 ORTHO05D001432 1.6e-15 86.3 109 51.4
Potri.002G159400 Populus trichocarpa HOM05D001604 ORTHO05D001432 4.6e-15 84.7 106 50.0
Dinv32479 Davidia involucrata HOM05D001604 ORTHO05D001432 1.0e-14 83.6 109 47.7
Sabra02G0126600 Salix brachista HOM05D001604 ORTHO05D001432 1.3e-14 83.2 111 47.7
Thecc.01G359500 Theobroma cacao HOM05D001604 ORTHO05D001432 2.3e-14 82.4 108 50.0
Atru.chr5.489 Acer truncatum HOM05D001604 ORTHO05D001432 3.0e-14 82.0 109 49.5
QL08p048868 Quercus lobata HOM05D001604 ORTHO05D001432 3.0e-14 82.0 109 48.6
CSS0010962 Camellia sinensis var. sinensis HOM05D001604 ORTHO05D001432 1.1e-13 80.1 107 46.7
Actinidia20908 Actinidia chinensis HOM05D001604 ORTHO05D001432 1.9e-13 79.3 100 46.0
GSVIVG01026927001 Vitis vinifera HOM05D001604 ORTHO05D001432 1.9e-13 79.3 108 48.1
Manes.05G034700 Manihot esculenta HOM05D001604 ORTHO05D001432 7.4e-13 77.4 95 45.3
Duzib138G0897 Durio zibethinus HOM05D001604 ORTHO05D001432 1.6e-12 76.3 108 46.3
Sed0005516 Sechium edule HOM05D001604 ORTHO05D001432 6.2e-12 74.3 105 41.0
Rhsim07G0015600 Rhododendron simsii HOM05D001604 ORTHO05D001432 8.2e-12 73.9 108 44.4
Sabra14G0060900 Salix brachista HOM05D001604 ORTHO05D001432 1.4e-11 73.2 111 43.2
Eucgr.D02287 Eucalyptus grandis HOM05D001604 ORTHO05D001432 2.4e-11 72.4 102 46.1
Actinidia10014 Actinidia chinensis HOM05D001604 ORTHO05D001432 3.1e-11 72.0 100 44.0
Haze_15498 Corylus avellana HOM05D001604 ORTHO05D001432 6.9e-11 70.9 124 41.9
ClCG06G003710 Citrullus lanatus HOM05D001604 ORTHO05D001432 9.0e-11 70.5 105 38.1
Cpa.g.sc537.2 Carica papaya HOM05D001604 ORTHO05D001432 2.6e-10 68.9 111 37.8
Gohir.D11G093000 Gossypium hirsutum HOM05D001604 ORTHO05D001432 2.6e-10 68.9 99 44.4
Gorai.007G099300 Gossypium raimondii HOM05D001604 ORTHO05D001432 4.5e-10 68.2 99 44.4
CsaV3_6G000530 Cucumis sativus L. HOM05D001604 ORTHO05D001432 5.8e-10 67.8 105 37.1
Aqoxy7G00315 Aquilegia oxysepala HOM05D001604 ORTHO05D001432 1.3e-09 66.6 109 43.1
PSO478G3902 Papaver somniferum HOM05D001604 ORTHO05D001432 2.9e-09 65.5 108 42.6
vmacro13285 Vaccinium macrocarpon HOM05D001604 ORTHO05D001432 2.9e-09 65.5 106 44.3
MELO3C021212.2 Cucumis melo HOM05D001604 ORTHO05D001432 6.5e-09 64.3 106 36.8
TAR629G3280 Trochodendron aralioides HOM05D001604 ORTHO05D001432 6.5e-09 64.3 107 38.3
PSO782G0939 Papaver somniferum HOM05D001604 ORTHO05D001432 1.4e-08 63.2 108 41.7
Lj7C513T12 Lonicera japonica HOM05D001604 ORTHO05D001432 1.9e-08 62.8 107 41.1
PGR031G3019 Punica granatum HOM05D001604 ORTHO05D001432 2.5e-08 62.4 99 45.5
Manes.02G019350 Manihot esculenta HOM05D001604 ORTHO05D001432 3.2e-08 62.0 104 41.3
AT1G63650 Arabidopsis thaliana HOM05D001604 ORTHO05D001432 7.1e-08 60.8 101 39.6
Cfa012225 Carpinus fangiana HOM05D001604 ORTHO05D001432 9.3e-08 60.5 116 38.8
Duzib205G0016 Durio zibethinus HOM05D001604 ORTHO05D001432 3.5e-07 58.5 120 34.2
DCAR_000616 Daucus carota HOM05D001604 ORTHO05D001432 4.6e-07 58.2 103 36.9
Nn1g01527 Nelumbo nucifera HOM05D001604 ORTHO05D001432 4.6e-07 58.2 116 40.5
Carub.0002s0120 Capsella rubella HOM05D001604 ORTHO05D001432 6.0e-07 57.8 106 35.8
Eucgr.D01841 Eucalyptus grandis HOM05D001604 ORTHO05D001432 7.9e-07 57.4 113 35.4
QL12p032851 Quercus lobata HOM05D001604 ORTHO05D001432 7.9e-07 57.4 116 37.1
CiPaw.11G134700 Carya illinoinensis HOM05D001604 ORTHO05D001432 1.0e-06 57.0 116 36.2
Medtr8g098275 Medicago truncatula HOM05D001604 ORTHO05D001432 1.0e-06 57.0 100 42.0
CiPaw.12G092700 Carya illinoinensis HOM05D001604 ORTHO05D001432 1.3e-06 56.6 112 36.6
Ciclev10019338m.g Citrus clementina HOM05D001604 ORTHO05D001432 1.3e-06 56.6 116 35.3
TWI15G0365 Tripterygium wilfordii HOM05D001604 ORTHO05D001432 1.3e-06 56.6 101 38.6
Haze_08785 Corylus avellana HOM05D001604 ORTHO05D001432 1.8e-06 56.2 116 37.9
SHI07140 Sapria himalayana HOM05D001604 ORTHO05D001432 1.8e-06 56.2 103 40.8
GSVIVG01019750001 Vitis vinifera HOM05D001604 ORTHO05D001432 1.8e-06 56.2 116 34.5
Thhalv10023356m.g Eutrema salsugineum HOM05D001604 ORTHO05D001432 3.0e-06 55.5 108 34.3
TAR375G0580 Trochodendron aralioides HOM05D001604 ORTHO05D001432 3.0e-06 55.5 116 37.1
MBI18_g04357_MAGBIO Magnolia biondii HOM05D001604 ORTHO05D001432 3.9e-06 55.1 114 38.6
CDE08G0583 Ceratophyllum demersum HOM05D001604 ORTHO05D001432 5.1e-06 54.7 110 40.0
THA.LOC104817999 Tarenaya hassleriana HOM05D001604 ORTHO05D001432 5.1e-06 54.7 111 34.2
Thecc.03G279300 Theobroma cacao HOM05D001604 ORTHO05D001432 5.1e-06 54.7 116 36.2
AT4G00480 Arabidopsis thaliana HOM05D001604 ORTHO05D001432 6.7e-06 54.3 97 37.1
arahy.Tifrunner.gnm1.ann1.1BTX43 Arachis hypogaea HOM05D001604 ORTHO05D001432 6.7e-06 54.3 102 40.2
arahy.Tifrunner.gnm1.ann1.SWJY0L Arachis hypogaea HOM05D001604 ORTHO05D001432 6.7e-06 54.3 102 40.2
Duzib068G0286 Durio zibethinus HOM05D001604 ORTHO05D001432 6.7e-06 54.3 116 36.2
Nn6g33430 Nelumbo nucifera HOM05D001604 ORTHO05D001432 6.7e-06 54.3 109 38.5
MD14G1105500 Malus domestica HOM05D001604 ORTHO05D001432 8.7e-06 53.9 116 36.2
Prupe.5G100700 Prunus persica HOM05D001604 ORTHO05D001432 8.7e-06 53.9 116 36.2


User provided reference genes

Program Settings