Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G3029 Fragaria x ananassa HOM05D005579 ORTHO05D006775 1.3e-55 219.5 113 100.0
FAN10G2011 Fragaria x ananassa HOM05D005579 ORTHO05D006775 1.2e-50 203.0 104 99.0
FAN01G1040 Fragaria x ananassa HOM05D005579 ORTHO05D006775 2.7e-50 201.8 105 98.1
FAN03G0333 Fragaria x ananassa HOM05D005579 ORTHO05D006775 1.4e-49 199.5 105 97.1
FAN03G0790 Fragaria x ananassa HOM05D005579 ORTHO05D006775 8.8e-49 196.8 105 96.2
FvH4_7g29490 Fragaria vesca HOM05D005579 ORTHO05D006775 4.1e-46 188.0 109 90.8
FAN06G4680 Fragaria x ananassa HOM05D005579 ORTHO05D006775 4.1e-46 188.0 109 90.8
FvH4_7g29470 Fragaria vesca HOM05D005579 ORTHO05D006775 3.2e-43 178.3 108 88.9
FAN06G0670 Fragaria x ananassa HOM05D005579 ORTHO05D006775 5.5e-43 177.6 110 87.3
FAN06G0715 Fragaria x ananassa HOM05D005579 ORTHO05D006775 5.5e-43 177.6 110 87.3
FAN06G4979 Fragaria x ananassa HOM05D005579 ORTHO05D006775 4.0e-41 171.4 107 87.9
RcHm_v2.0_Chr1g0377251 Rosa chinensis HOM05D005579 ORTHO05D006775 1.2e-29 133.3 115 68.7
Prupe.2G294300 Prunus persica HOM05D005579 ORTHO05D006775 3.7e-23 111.7 98 64.3
MD01G1200900 Malus domestica HOM05D005579 ORTHO05D006775 1.0e-20 103.6 85 68.2
MD07G1268700 Malus domestica HOM05D005579 ORTHO05D006775 1.0e-20 103.6 95 61.1
Cpa.g.sc107.52 Carica papaya HOM05D005579 ORTHO05D006775 1.7e-15 86.3 98 53.1
Thecc.03G176600 Theobroma cacao HOM05D005579 ORTHO05D006775 4.9e-15 84.7 104 50.0
Cfa008319 Carpinus fangiana HOM05D005579 ORTHO05D006775 1.1e-14 83.6 100 53.0
Ciclev10006492m.g Citrus clementina HOM05D005579 ORTHO05D006775 2.4e-14 82.4 84 56.0
Duzib068G1336 Durio zibethinus HOM05D005579 ORTHO05D006775 4.1e-14 81.6 104 49.0
Haze_13709 Corylus avellana HOM05D005579 ORTHO05D006775 5.4e-14 81.3 104 50.0
COL.COLO4_14309 Corchorus olitorius HOM05D005579 ORTHO05D006775 1.2e-13 80.1 105 51.4
TAR367G0001 Trochodendron aralioides HOM05D005579 ORTHO05D006775 1.6e-13 79.7 112 39.3
Sp6g14550 Schrenkiella parvula HOM05D005579 ORTHO05D006775 3.5e-13 78.6 94 51.1
Actinidia32860 Actinidia chinensis HOM05D005579 ORTHO05D006775 7.8e-13 77.4 90 46.7
Manes.06G147100 Manihot esculenta HOM05D005579 ORTHO05D006775 1.0e-12 77.0 83 53.0
Lj2g0003134 Lotus japonicus HOM05D005579 ORTHO05D006775 1.7e-12 76.3 98 51.0
Carub.0008s1239 Capsella rubella HOM05D005579 ORTHO05D006775 6.6e-12 74.3 121 38.8
Rhsim03G0180800 Rhododendron simsii HOM05D005579 ORTHO05D006775 6.6e-12 74.3 89 50.6
Nn6g33500 Nelumbo nucifera HOM05D005579 ORTHO05D006775 1.5e-11 73.2 107 42.1
Potri.012G141100 Populus trichocarpa HOM05D005579 ORTHO05D006775 1.9e-11 72.8 83 48.2
AT5G52290 Arabidopsis thaliana HOM05D005579 ORTHO05D006775 2.5e-11 72.4 84 51.2
Psat0s2227g0080 Pisum sativum HOM05D005579 ORTHO05D006775 3.3e-11 72.0 80 51.2
Sabra12G0106200 Salix brachista HOM05D005579 ORTHO05D006775 4.3e-11 71.6 83 51.8
EL10Ac3g05643 Beta vulgaris HOM05D005579 ORTHO05D006775 7.3e-11 70.9 83 49.4
Medtr6g045353 Medicago truncatula HOM05D005579 ORTHO05D006775 7.3e-11 70.9 109 39.4
QL09p014214 Quercus lobata HOM05D005579 ORTHO05D006775 7.3e-11 70.9 82 52.4
TPR.G10740 Trifolium pratense HOM05D005579 ORTHO05D006775 7.3e-11 70.9 84 50.0
AL271U10020 Arabidopsis lyrata HOM05D005579 ORTHO05D006775 1.2e-10 70.1 97 46.4
Peaxi162Scf00444g00841 Petunia axillaris HOM05D005579 ORTHO05D006775 1.2e-10 70.1 92 44.6
Actinidia34112 Actinidia chinensis HOM05D005579 ORTHO05D006775 1.6e-10 69.7 95 45.3
BcaC01g06176 Brassica carinata HOM05D005579 ORTHO05D006775 1.6e-10 69.7 100 46.0
A03p15740 Brassica napus HOM05D005579 ORTHO05D006775 1.6e-10 69.7 86 48.8
C03p18410 Brassica napus HOM05D005579 ORTHO05D006775 1.6e-10 69.7 100 46.0
BolC3t14238H Brassica oleracea HOM05D005579 ORTHO05D006775 1.6e-10 69.7 100 46.0
BraA03t10864Z Brassica rapa HOM05D005579 ORTHO05D006775 1.6e-10 69.7 86 48.8
VMungo0464G1636 Vigna mungo HOM05D005579 ORTHO05D006775 1.6e-10 69.7 84 47.6
Ca_25744_v3 Cicer arietinum L. HOM05D005579 ORTHO05D006775 2.8e-10 68.9 82 48.8
Gohir.D12G259200 Gossypium hirsutum HOM05D005579 ORTHO05D006775 3.6e-10 68.6 98 44.9
Phvul.004G117000 Phaseolus vulgaris HOM05D005579 ORTHO05D006775 3.6e-10 68.6 99 43.4
CANSAT21G2370 Cannabis sativa HOM05D005579 ORTHO05D006775 6.2e-10 67.8 81 48.1
Thhalv10015364m.g Eutrema salsugineum HOM05D005579 ORTHO05D006775 6.2e-10 67.8 84 50.0
Gohir.A12G257850 Gossypium hirsutum HOM05D005579 ORTHO05D006775 6.2e-10 67.8 98 44.9
Gorai.008G277600 Gossypium raimondii HOM05D005579 ORTHO05D006775 2.3e-09 65.9 98 43.9
Lalb_Chr19g0130841 Lupinus albus HOM05D005579 ORTHO05D006775 5.2e-09 64.7 93 47.3
Nitab4.5_0009681g0030 Nicotiana tabacum HOM05D005579 ORTHO05D006775 5.2e-09 64.7 105 41.9
TWI23G0169 Tripterygium wilfordii HOM05D005579 ORTHO05D006775 5.2e-09 64.7 82 48.8
MBI17_g46440_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D048546 6.8e-09 64.3 81 43.2
CARHR265270 Cardamine hirsuta HOM05D005579 ORTHO05D006775 1.2e-08 63.5 97 43.3
COL.COLO4_31594 Corchorus olitorius HOM05D005579 ORTHO05D006775 1.2e-08 63.5 109 40.4
Ah.07g207210 Amaranthus hybridus HOM05D005579 ORTHO05D006775 1.5e-08 63.2 97 42.3
AL8G26680 Arabidopsis lyrata HOM05D005579 ORTHO05D006775 1.5e-08 63.2 84 48.8
CiPaw.04G071000 Carya illinoinensis HOM05D005579 ORTHO05D006775 1.5e-08 63.2 76 50.0
Oeu056255.1 Olea europaea HOM05D005579 ORTHO05D006775 1.5e-08 63.2 104 37.5
Nitab4.5_0000716g0010 Nicotiana tabacum HOM05D005579 ORTHO05D006775 2.6e-08 62.4 109 39.4
PSO782G1268 Papaver somniferum HOM05D005579 ORTHO05D006775 2.6e-08 62.4 84 40.5
Sopen03g004630 Solanum pennellii HOM05D005579 ORTHO05D006775 2.6e-08 62.4 91 40.7
BcaB01g04199 Brassica carinata HOM05D005579 ORTHO05D006775 4.4e-08 61.6 86 44.2
PSO063G6446 Papaver somniferum HOM05D005579 ORTHO05D006775 4.4e-08 61.6 83 39.8
ClCG09G012930 Citrullus lanatus HOM05D005579 ORTHO05D006775 9.9e-08 60.5 93 43.0
MELO3C003322.2 Cucumis melo HOM05D005579 ORTHO05D006775 9.9e-08 60.5 80 47.5
DCAR_018198 Daucus carota HOM05D005579 ORTHO05D006775 9.9e-08 60.5 101 38.6
Glyma.09G139400 Glycine max HOM05D005579 ORTHO05D006775 2.9e-07 58.9 80 45.0
PSO339G5948 Papaver somniferum HOM05D007489 ORTHO05D008037 2.9e-07 58.9 82 39.0
Sed0022815 Sechium edule HOM05D005579 ORTHO05D006775 4.9e-07 58.2 85 47.1
Aa31LG3G8710 Aethionema arabicum HOM05D005579 ORTHO05D006775 6.4e-07 57.8 97 40.2
Dinv28442 Davidia involucrata HOM05D005579 ORTHO05D006775 1.1e-06 57.0 56 55.4
ECA232G1470 Erigeron canadensis HOM05D005579 ORTHO05D006775 1.1e-06 57.0 82 45.1
Lsat_1_v5_gn_9_55980 Lactuca sativa HOM05D005579 ORTHO05D006775 1.1e-06 57.0 115 40.9
Solyc03g025820.3 Solanum lycopersicum HOM05D005579 ORTHO05D006775 1.1e-06 57.0 91 38.5


User provided reference genes

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