Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G1532 Fragaria x ananassa HOM05D000368 ORTHO05D009348 2.4e-108 396.0 278 100.0
FAN10G1519 Fragaria x ananassa HOM05D000368 ORTHO05D009348 4.4e-102 375.2 277 97.5
FAN06G0492 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.7e-101 373.2 279 92.1
FAN06G1486 Fragaria x ananassa HOM05D000368 ORTHO05D009348 8.4e-101 370.9 279 91.8
FAN01G1188 Fragaria x ananassa HOM05D000368 ORTHO05D009348 4.9e-93 345.1 264 90.2
RcHm_v2.0_Chr1g0377401 Rosa chinensis HOM05D000368 ORTHO05D009348 2.7e-91 339.3 285 84.6
FvH4_7g29542 Fragaria vesca HOM05D000368 ORTHO05D009348 1.1e-63 247.7 212 90.6
MD07G1269700 Malus domestica HOM05D000368 ORTHO05D009348 2.0e-62 243.4 284 69.4
Prupe.2G295100 Prunus persica HOM05D000368 ORTHO05D009348 7.2e-60 235.0 284 65.5
MD01G1201700 Malus domestica HOM05D000368 ORTHO05D009348 1.8e-58 230.3 285 70.9
Cc02_g02880 Coffea canephora HOM05D000368 ORTHO05D009348 4.0e-42 176.0 290 57.9
Dinv35216 Davidia involucrata HOM05D000368 ORTHO05D000289 5.7e-41 172.2 281 61.9
Ah.13g068650 Amaranthus hybridus HOM05D000368 ORTHO05D009348 2.2e-40 170.2 280 59.6
Gohir.D12G258500 Gossypium hirsutum HOM05D000368 ORTHO05D009348 4.8e-40 169.1 288 61.1
Gorai.008G276900 Gossypium raimondii HOM05D000368 ORTHO05D009348 1.8e-39 167.2 287 60.6
Gohir.A12G257200 Gossypium hirsutum HOM05D000368 ORTHO05D009348 5.0e-37 159.1 286 58.7
CiPaw.04G071400 Carya illinoinensis HOM05D000368 ORTHO05D009348 1.4e-34 151.0 280 62.1
Cfa008323 Carpinus fangiana HOM05D000368 ORTHO05D009348 1.5e-33 147.5 286 60.8
TAR629G3168 Trochodendron aralioides HOM05D000368 ORTHO05D009348 2.0e-33 147.1 295 54.6
Lsat_1_v5_gn_2_132381 Lactuca sativa HOM05D000368 ORTHO05D009348 3.4e-33 146.4 282 58.9
HanXRQChr07g0207001 Helianthus annuus HOM05D000368 ORTHO05D009348 4.4e-33 146.0 282 56.4
Potri.012G141700 Populus trichocarpa HOM05D000368 ORTHO05D009348 4.4e-33 146.0 280 55.4
Psat0s3135g0040 Pisum sativum HOM05D000368 ORTHO05D009348 9.8e-33 144.8 282 61.0
Thecc.03G177600 Theobroma cacao HOM05D000368 ORTHO05D009348 9.8e-33 144.8 288 60.8
PGR142G2510 Punica granatum HOM05D000368 ORTHO05D009348 1.3e-32 144.4 284 59.9
THA.LOC104811975 Tarenaya hassleriana HOM05D000368 ORTHO05D009348 1.3e-32 144.4 281 58.0
Eucgr.K00263 Eucalyptus grandis HOM05D000368 ORTHO05D009348 2.8e-32 143.3 282 55.7
EL10Ac3g05631 Beta vulgaris HOM05D000368 ORTHO05D009348 4.8e-32 142.5 285 55.8
Ciclev10005579m.g Citrus clementina HOM05D000368 ORTHO05D009348 4.8e-32 142.5 292 55.8
Manes.14G025600 Manihot esculenta HOM05D000368 ORTHO05D009348 7.0e-31 138.7 283 57.2
TPR.G27005 Trifolium pratense HOM05D000368 ORTHO05D009348 7.0e-31 138.7 283 44.9
Aa31LG3G8750 Aethionema arabicum HOM05D000368 ORTHO05D009348 1.2e-30 137.9 283 54.4
Hund11743 Selenicereus undatus HOM05D000368 ORTHO05D009348 1.2e-30 137.9 288 56.6
Sabra15G0154200 Salix brachista HOM05D000368 ORTHO05D009348 2.7e-30 136.7 283 57.2
Ca_10757_v3 Cicer arietinum L. HOM05D000368 ORTHO05D009348 4.5e-30 136.0 279 38.7
Potri.015G144600 Populus trichocarpa HOM05D000368 ORTHO05D009348 7.7e-30 135.2 283 55.8
AT5G52380 Arabidopsis thaliana HOM05D000368 ORTHO05D009348 1.0e-29 134.8 279 55.2
Solyc03g025740.4 Solanum lycopersicum HOM05D000368 ORTHO05D009348 1.0e-29 134.8 283 55.8
GSVIVG01028962001 Vitis vinifera HOM05D000368 ORTHO05D009348 1.0e-29 134.8 285 53.3
Duzib205G0377 Durio zibethinus HOM05D000368 ORTHO05D000289 1.7e-29 134.0 262 59.9
TWI39G0209 Tripterygium wilfordii HOM05D000368 ORTHO05D009348 2.3e-29 133.7 287 59.6
Sopen03g004560 Solanum pennellii HOM05D000368 ORTHO05D009348 6.6e-29 132.1 283 55.5
VMungo0720G3173 Vigna mungo HOM05D000368 ORTHO05D009348 8.6e-29 131.7 279 54.1
Nn1g01474 Nelumbo nucifera HOM05D000368 ORTHO05D009348 1.1e-28 131.3 287 55.7
Glyma.20G159100 Glycine max HOM05D000368 ORTHO05D009348 1.5e-28 131.0 282 52.8
Carub.0008s1248 Capsella rubella HOM05D000368 ORTHO05D009348 1.9e-28 130.6 278 56.8
PGSC0003DMG402014344 Solanum tuberosum HOM05D000368 ORTHO05D009348 2.5e-28 130.2 283 54.4
Rhsim09G0197900 Rhododendron simsii HOM05D000368 ORTHO05D009348 4.2e-28 129.4 279 54.5
ECA238G2658 Erigeron canadensis HOM05D000368 ORTHO05D000289 5.5e-28 129.0 281 56.2
Sc19g0001470 Simmondsia chinensis HOM05D000368 ORTHO05D009348 2.1e-27 127.1 278 57.6
AL8G26780 Arabidopsis lyrata HOM05D000368 ORTHO05D009348 3.6e-27 126.3 278 54.3
PSO063G1784 Papaver somniferum HOM05D000368 ORTHO05D009348 1.4e-26 124.4 288 52.4
PSO782G2079 Papaver somniferum HOM05D000368 ORTHO05D009348 3.0e-26 123.2 288 54.5
DCAR_020244 Daucus carota HOM05D000368 ORTHO05D009348 4.0e-26 122.9 240 57.1
Lj5g0009535 Lotus japonicus HOM05D000368 ORTHO05D009348 6.8e-26 122.1 278 56.8
CARHR265330 Cardamine hirsuta HOM05D000368 ORTHO05D009348 2.0e-25 120.6 285 54.4
QL09p014019 Quercus lobata HOM05D000368 ORTHO05D009348 2.0e-25 120.6 319 52.7
CANSAT21G1838 Cannabis sativa HOM05D000368 ORTHO05D009348 2.6e-25 120.2 249 61.4
Cpa.g.sc107.59 Carica papaya HOM05D000368 ORTHO05D009348 2.6e-25 120.2 288 54.9
Haze_13700 Corylus avellana HOM05D000368 ORTHO05D009348 2.6e-25 120.2 263 59.3
Lalb_Chr21g0305051 Lupinus albus HOM05D000368 ORTHO05D009348 1.7e-24 117.5 282 53.5
Glyma.10G235200 Glycine max HOM05D000368 ORTHO05D009348 2.2e-24 117.1 283 51.2
SGA_v2.0_scaffold44G16725 Striga asiatica HOM05D000368 ORTHO05D009348 2.8e-24 116.7 286 51.7
MSTRG.8734 Avicennia marina HOM05D000368 ORTHO05D009348 4.9e-24 115.9 277 56.3
Hma1.2p1_0270F.1_g107970 Hydrangea macrophylla HOM05D000368 ORTHO05D009348 6.3e-24 115.5 288 53.1
Phvul.007G070700 Phaseolus vulgaris HOM05D000368 ORTHO05D009348 6.3e-24 115.5 236 53.8
vmacro09836 Vaccinium macrocarpon HOM05D000368 ORTHO05D000289 2.4e-23 113.6 232 40.1
MELO3C006911.2 Cucumis melo HOM05D000368 ORTHO05D009348 7.0e-23 112.1 233 59.7
ClCG05G008070 Citrullus lanatus HOM05D000368 ORTHO05D009348 2.7e-22 110.2 284 53.2
arahy.Tifrunner.gnm1.ann1.C4Z81U Arachis hypogaea HOM05D000368 ORTHO05D009348 3.5e-22 109.8 292 54.8
AUR62015971 Chenopodium quinoa HOM05D000368 ORTHO05D009348 7.8e-22 108.6 239 57.3
CsaV3_3G017130 Cucumis sativus L. HOM05D000368 ORTHO05D009348 2.3e-21 107.1 282 54.6
Aqoxy5G04003 Aquilegia oxysepala HOM05D000368 ORTHO05D009348 8.6e-21 105.1 293 56.3
arahy.Tifrunner.gnm1.ann1.HM7G91 Arachis hypogaea HOM05D000368 ORTHO05D009348 1.5e-20 104.4 291 53.6
Dinv24555 Davidia involucrata HOM05D000368 ORTHO05D009348 1.5e-20 104.4 113 54.9
Nitab4.5_0002117g0050 Nicotiana tabacum HOM05D000368 ORTHO05D009348 1.5e-20 104.4 155 57.4
ATR0680G368 Amborella trichopoda HOM05D000368 ORTHO05D009348 1.9e-20 104.0 288 53.8
Sed0010584 Sechium edule HOM05D000368 ORTHO05D009348 1.9e-20 104.0 283 51.6
Actinidia31822 Actinidia chinensis HOM05D000368 ORTHO05D009348 5.6e-20 102.4 152 57.9
Thhalv10014379m.g Eutrema salsugineum HOM05D000368 ORTHO05D009348 5.6e-20 102.4 283 54.1
BolC9t57061H Brassica oleracea HOM05D000368 ORTHO05D009348 9.5e-20 101.7 302 51.0
Zm00001eb074410 Zea mays HOM05D000368 ORTHO05D009348 3.6e-19 99.8 283 49.5
C09p41730 Brassica napus HOM05D000368 ORTHO05D000289 4.0e-18 96.3 142 47.2
BraA03t10861Z Brassica rapa HOM05D000368 ORTHO05D000289 6.8e-18 95.5 294 48.0
CSS0042203 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 8.9e-18 95.1 150 47.3
Sp6g14600 Schrenkiella parvula HOM05D000368 ORTHO05D000289 2.6e-17 93.6 279 52.7
CSS0028945 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 4.4e-17 92.8 151 51.0
Migut.F00336 Erythranthe guttata HOM05D000368 ORTHO05D009348 4.4e-17 92.8 282 52.5
MBI17_g19093_MAGBIO Magnolia biondii HOM05D000368 ORTHO05D009348 1.3e-16 91.3 313 39.0
Dinv28433 Davidia involucrata HOM05D000368 ORTHO05D009348 2.2e-16 90.5 128 46.1
C03p18350 Brassica napus HOM05D000368 ORTHO05D000289 2.9e-16 90.1 277 51.3
Atru.BG.181.p Acer truncatum HOM05D000368 ORTHO05D009348 4.9e-16 89.4 99 56.6
Atru.chr1.452 Acer truncatum HOM05D000368 ORTHO05D009348 4.9e-16 89.4 99 56.6
BolC3t14232H Brassica oleracea HOM05D000368 ORTHO05D000289 4.9e-16 89.4 277 52.0
Os04g0555800 Oryza sativa ssp. japonica HOM05D000368 ORTHO05D009348 4.9e-16 89.4 104 52.9
A03p15700 Brassica napus HOM05D000368 ORTHO05D000289 3.2e-15 86.7 277 50.9
HPP92_006518 Vanilla planifolia HOM05D000368 ORTHO05D009348 5.4e-15 85.9 291 48.5
HPP92_018588 Vanilla planifolia HOM05D000368 ORTHO05D009348 9.2e-15 85.1 291 48.1
Mapoly0006s0064 Marchantia polymorpha HOM05D000368 ORTHO05D009348 4.3e-12 76.3 206 50.0
Actinidia03122 Actinidia chinensis HOM05D000368 ORTHO05D009348 9.5e-12 75.1 62 59.7
Pp3c16_20170 Physcomitrium patens HOM05D000368 ORTHO05D009348 3.6e-11 73.2 121 38.8
SEGI_15321 Sequoiadendron giganteum HOM05D000368 ORTHO05D009348 4.7e-11 72.8 101 54.5
Dinv24556 Davidia involucrata HOM05D000368 ORTHO05D009348 1.8e-10 70.9 184 55.4
AagrBONN_evm.TU.Sc2ySwM_117.528 Anthoceros agrestis HOM05D000368 ORTHO05D009348 2.3e-10 70.5 299 39.8
BraA10t43080Z Brassica rapa HOM05D000368 ORTHO05D009348 5.4e-07 59.3 41 56.1
A10p09970 Brassica napus HOM05D000368 ORTHO05D009348 6.0e-06 55.8 31 67.7


User provided reference genes

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