Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G0479 Fragaria x ananassa HOM05D002493 ORTHO05D013605 4.4e-150 534.6 279 100.0
FAN01G2439 Fragaria x ananassa HOM05D002493 ORTHO05D003175 7.1e-132 474.2 294 89.5
FAN10G3393 Fragaria x ananassa HOM05D002493 ORTHO05D003175 3.5e-123 445.3 320 80.6
FAN03G1106 Fragaria x ananassa HOM05D002493 ORTHO05D003175 1.3e-122 443.4 323 79.3
FAN06G0701 Fragaria x ananassa HOM05D002493 ORTHO05D003175 6.4e-117 424.5 324 77.2
FAN06G0974 Fragaria x ananassa HOM05D002493 ORTHO05D003175 8.4e-117 424.1 324 76.9
RcHm_v2.0_Chr1g0352691 Rosa chinensis HOM05D002493 ORTHO05D003175 6.3e-88 328.2 322 64.0
Prupe.7G028700 Prunus persica HOM05D002493 ORTHO05D003175 7.5e-17 92.0 441 29.7
QL07p012378 Quercus lobata HOM05D002493 ORTHO05D003175 1.7e-16 90.9 182 41.8
Hma1.2p1_0254F.1_g103210 Hydrangea macrophylla HOM05D002493 ORTHO05D003175 7.1e-15 85.5 170 41.2
Dinv08254 Davidia involucrata HOM05D002493 ORTHO05D003175 2.7e-14 83.6 168 41.1
Phvul.007G239100 Phaseolus vulgaris HOM05D002493 ORTHO05D003175 2.7e-14 83.6 176 38.6
CiPaw.09G049700 Carya illinoinensis HOM05D002493 ORTHO05D003175 3.0e-13 80.1 173 43.9
CiPaw.10G042500 Carya illinoinensis HOM05D002493 ORTHO05D003175 3.0e-13 80.1 175 41.7
Sed0019660 Sechium edule HOM05D002493 ORTHO05D003175 6.6e-13 79.0 428 27.6
Glyma.02G157800 Glycine max HOM05D002493 ORTHO05D003175 3.3e-12 76.6 135 41.5
Haze_20255 Corylus avellana HOM05D002493 ORTHO05D003175 4.3e-12 76.3 123 49.6
Ca_08373_v3 Cicer arietinum L. HOM05D002493 ORTHO05D003175 5.6e-12 75.9 158 38.6
COL.COLO4_08833 Corchorus olitorius HOM05D002493 ORTHO05D003175 5.6e-12 75.9 178 37.1
VMungo0720G0912 Vigna mungo HOM05D002493 ORTHO05D003175 7.3e-12 75.5 210 36.2
TAR633G1508 Trochodendron aralioides HOM05D002493 ORTHO05D003175 1.6e-11 74.3 161 38.5
Dinv21482 Davidia involucrata HOM05D002493 ORTHO05D003175 4.7e-11 72.8 433 27.0
FAN14G2978 Fragaria x ananassa HOM05D002493 ORTHO05D003175 4.7e-11 72.8 162 38.3
Sed0023770 Sechium edule HOM05D002493 ORTHO05D003175 4.7e-11 72.8 445 27.0
Cfa019980 Carpinus fangiana HOM05D002493 ORTHO05D003175 6.2e-11 72.4 429 28.2
Nn7g36909 Nelumbo nucifera HOM05D002493 ORTHO05D003175 6.2e-11 72.4 157 36.9
Duzib106G0075 Durio zibethinus HOM05D002493 ORTHO05D003175 1.4e-10 71.2 155 39.4
Lj2C403T6 Lonicera japonica HOM05D002493 ORTHO05D003175 1.4e-10 71.2 104 47.1
Thecc.05G121400 Theobroma cacao HOM05D002493 ORTHO05D003175 1.4e-10 71.2 170 36.5
CANSAT64G2707 Cannabis sativa HOM05D002493 ORTHO05D003175 1.8e-10 70.9 221 35.3
FAN02G2197 Fragaria x ananassa HOM05D002493 ORTHO05D003175 1.8e-10 70.9 160 38.1
MD14G1088300 Malus domestica HOM05D002493 ORTHO05D003175 1.8e-10 70.9 450 26.4
Manes.08G061400 Manihot esculenta HOM05D002493 ORTHO05D003175 1.8e-10 70.9 170 38.2
Nn2g14656 Nelumbo nucifera HOM05D002493 ORTHO05D003175 2.4e-10 70.5 158 36.1
CSS0002579 Camellia sinensis var. sinensis HOM05D002493 ORTHO05D003175 3.1e-10 70.1 164 36.0
Phvul.001G120200 Phaseolus vulgaris HOM05D002493 ORTHO05D003175 5.2e-10 69.3 173 35.8
ClCG10G016470 Citrullus lanatus HOM05D002493 ORTHO05D003175 8.9e-10 68.6 433 26.8
MELO3C009729.2 Cucumis melo HOM05D002493 ORTHO05D003175 8.9e-10 68.6 244 32.8
Duzib128G0587 Durio zibethinus HOM05D002493 ORTHO05D003175 1.2e-09 68.2 168 35.7
Medtr7g089140 Medicago truncatula HOM05D002493 ORTHO05D003175 1.5e-09 67.8 164 34.8
FvH4_4g13680 Fragaria vesca HOM05D011619 ORTHO05D013605 2.0e-09 67.4 262 29.0
TAR636G0768 Trochodendron aralioides HOM05D002493 ORTHO05D003175 2.0e-09 67.4 191 31.9
Sabra16G0036400 Salix brachista HOM05D002493 ORTHO05D003175 3.4e-09 66.6 59 61.0
Ca_12358_v3 Cicer arietinum L. HOM05D002493 ORTHO05D003175 4.4e-09 66.2 98 44.9
Glyma.03G124700 Glycine max HOM05D002493 ORTHO05D003175 4.4e-09 66.2 167 36.5
FAN12G2052 Fragaria x ananassa HOM05D011619 ORTHO05D013605 9.9e-09 65.1 258 29.1
vmacro08996 Vaccinium macrocarpon HOM05D002493 ORTHO05D003175 9.9e-09 65.1 357 27.7
Eucgr.A02206 Eucalyptus grandis HOM05D002493 ORTHO05D003175 1.3e-08 64.7 439 26.2
DCAR_013651 Daucus carota HOM05D002493 ORTHO05D003175 1.7e-08 64.3 171 34.5
MBI13_g36916_MAGBIO Magnolia biondii HOM05D002493 ORTHO05D003175 1.7e-08 64.3 141 35.5
CsaV3_3G039870 Cucumis sativus L. HOM05D002493 ORTHO05D003175 2.2e-08 63.9 433 26.8
CiPaw.09G049600 Carya illinoinensis HOM05D002493 ORTHO05D003175 2.9e-08 63.5 50 62.0
SalBow1G7393 Salvia bowleyana HOM05D002493 ORTHO05D003175 2.9e-08 63.5 161 36.0
Lalb_Chr02g0156621 Lupinus albus HOM05D002493 ORTHO05D003175 3.8e-08 63.2 168 34.5
Lalb_Chr14g0365651 Lupinus albus HOM05D002493 ORTHO05D003175 3.8e-08 63.2 164 36.0
Manes.09G002800 Manihot esculenta HOM05D002493 ORTHO05D003175 3.8e-08 63.2 191 33.0
Lj1g0014460 Lotus japonicus HOM05D002493 ORTHO05D003175 4.9e-08 62.8 146 37.7
Nitab4.5_0000062g0160 Nicotiana tabacum HOM05D002493 ORTHO05D003175 4.9e-08 62.8 147 34.7
Potri.006G035500 Populus trichocarpa HOM05D002493 ORTHO05D003175 4.9e-08 62.8 197 34.5
Sc13g0000980 Simmondsia chinensis HOM05D002493 ORTHO05D003175 4.9e-08 62.8 395 28.1
Ca_22467_v3 Cicer arietinum L. HOM05D000349 ORTHO05D003175 6.4e-08 62.4 178 33.7
Nitab4.5_0002869g0070 Nicotiana tabacum HOM05D002493 ORTHO05D003175 6.4e-08 62.4 142 36.6
FvH4_6g37520 Fragaria vesca HOM05D002493 ORTHO05D003175 8.4e-08 62.0 429 25.9
TAR375G0992 Trochodendron aralioides HOM05D002493 ORTHO05D003175 8.4e-08 62.0 156 34.0
FAN12G0042 Fragaria x ananassa HOM05D011619 ORTHO05D013605 1.1e-07 61.6 270 28.1
FAN12G1211 Fragaria x ananassa HOM05D011619 ORTHO05D013605 1.1e-07 61.6 270 28.1
Ah.04g150770 Amaranthus hybridus HOM05D002493 ORTHO05D003175 1.4e-07 61.2 65 46.2
Gohir.D11G321900 Gossypium hirsutum HOM05D002493 ORTHO05D003175 1.4e-07 61.2 440 25.5
TPR.G16085 Trifolium pratense HOM05D002493 ORTHO05D003175 1.4e-07 61.2 160 36.2
ATR0307G132 Amborella trichopoda HOM05D002493 ORTHO05D003175 1.9e-07 60.8 133 34.6
Glyma.19G127800 Glycine max HOM05D002493 ORTHO05D003175 1.9e-07 60.8 171 35.1
Lalb_Chr24g0400441 Lupinus albus HOM05D002493 ORTHO05D003175 1.9e-07 60.8 116 38.8
Oeu024613.1 Olea europaea HOM05D002493 ORTHO05D003175 1.9e-07 60.8 168 32.7
Hund19081 Selenicereus undatus HOM05D002493 ORTHO05D003175 1.9e-07 60.8 182 34.1
PGR042G0425 Punica granatum HOM05D002493 ORTHO05D003175 2.4e-07 60.5 434 25.3
Sabra06G0023800 Salix brachista HOM05D002493 ORTHO05D003175 2.4e-07 60.5 77 51.9
Ah.13g077170 Amaranthus hybridus HOM05D002493 ORTHO05D003175 3.2e-07 60.1 65 44.6
AT3G10820 Arabidopsis thaliana HOM05D002493 ORTHO05D003175 3.2e-07 60.1 171 34.5
CARHR208120 Cardamine hirsuta HOM05D002493 ORTHO05D003175 3.2e-07 60.1 139 33.8
Ca_17097_v3 Cicer arietinum L. HOM05D002493 ORTHO05D003175 3.2e-07 60.1 101 41.6
RcHm_v2.0_Chr2g0150411 Rosa chinensis HOM05D002493 ORTHO05D003175 3.2e-07 60.1 442 26.9
VMungo1383G2045 Vigna mungo HOM05D002493 ORTHO05D003175 3.2e-07 60.1 168 33.9
Gohir.A11G306400 Gossypium hirsutum HOM05D002493 ORTHO05D003175 4.1e-07 59.7 443 26.0
Lsat_1_v5_gn_7_61900 Lactuca sativa HOM05D002493 ORTHO05D003175 4.1e-07 59.7 60 50.0
Atru.chr1.1386 Acer truncatum HOM05D002493 ORTHO05D003175 7.1e-07 58.9 174 33.9
FAN09G4564 Fragaria x ananassa HOM05D002493 ORTHO05D003175 7.1e-07 58.9 427 25.1
Haze_20253 Corylus avellana HOM05D002493 ORTHO05D003175 9.2e-07 58.5 145 35.9
Migut.J01632 Erythranthe guttata HOM05D002493 ORTHO05D003175 9.2e-07 58.5 185 31.9
Ciclev10011717m.g Citrus clementina HOM05D002493 ORTHO05D003175 1.2e-06 58.2 424 26.2
Migut.K00147 Erythranthe guttata HOM05D002493 ORTHO05D003175 1.2e-06 58.2 180 35.6
FvH4_4g07530 Fragaria vesca HOM05D011619 ORTHO05D013605 1.2e-06 58.2 68 50.0
FAN22G0183 Fragaria x ananassa HOM05D011619 ORTHO05D013605 1.2e-06 58.2 68 50.0
Lalb_Chr22g0357761 Lupinus albus HOM05D002493 ORTHO05D003175 1.2e-06 58.2 161 35.4
Sc19g0008100 Simmondsia chinensis HOM05D002493 ORTHO05D003175 1.2e-06 58.2 172 35.5
C09p71560 Brassica napus HOM05D002493 ORTHO05D003175 1.6e-06 57.8 165 36.4
BolC9t59917H Brassica oleracea HOM05D002493 ORTHO05D003175 1.6e-06 57.8 165 36.4
Gorai.007G352000 Gossypium raimondii HOM05D002493 ORTHO05D003175 1.6e-06 57.8 438 25.3
PGSC0003DMG400028192 Solanum tuberosum HOM05D002493 ORTHO05D003175 1.6e-06 57.8 144 32.6
Actinidia05482 Actinidia chinensis HOM05D002493 ORTHO05D003175 2.1e-06 57.4 157 33.8
MSTRG.6331 Avicennia marina HOM05D002493 ORTHO05D003175 2.7e-06 57.0 176 33.0
A10p31030 Brassica napus HOM05D002493 ORTHO05D003175 3.5e-06 56.6 158 38.0
BraA10t45148Z Brassica rapa HOM05D002493 ORTHO05D003175 3.5e-06 56.6 158 38.0
AL3G22340 Arabidopsis lyrata HOM05D002493 ORTHO05D003175 4.6e-06 56.2 172 35.5
SGA_v2.0_scaffold66G22278 Striga asiatica HOM05D002493 ORTHO05D003175 4.6e-06 56.2 102 42.2
MSTRG.19785 Avicennia marina HOM05D002493 ORTHO05D003175 6.0e-06 55.8 183 32.8
Oeu005221.1 Olea europaea HOM05D002493 ORTHO05D003175 6.0e-06 55.8 164 35.4
AT5G05140 Arabidopsis thaliana HOM05D002493 ORTHO05D003175 7.8e-06 55.5 171 33.3
arahy.Tifrunner.gnm1.ann1.TK2Q97 Arachis hypogaea HOM05D002493 ORTHO05D003175 7.8e-06 55.5 124 37.1
Lsat_1_v5_gn_9_32260 Lactuca sativa HOM05D002493 ORTHO05D003175 7.8e-06 55.5 138 33.3
Nitab4.5_0007477g0010 Nicotiana tabacum HOM05D002493 ORTHO05D003175 7.8e-06 55.5 144 31.9
TWI53G1609 Tripterygium wilfordii HOM05D002493 ORTHO05D003175 7.8e-06 55.5 178 32.0


User provided reference genes

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