Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 4.7e-163 577.8 292 100.0
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 1.8e-146 522.7 292 92.8
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 2.2e-144 515.8 265 98.1
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 2.2e-144 515.8 265 98.1
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 2.9e-136 488.8 292 88.4
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 8.8e-117 424.1 265 80.0
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 4.5e-113 411.8 261 81.2
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 6.5e-112 407.9 269 76.6
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 1.1e-111 407.1 268 76.1
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 3.6e-110 402.1 254 78.0
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 1.3e-107 393.7 257 78.2
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 1.1e-106 390.6 247 78.9
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 1.1e-106 390.6 245 76.7
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 1.1e-106 390.6 260 75.0
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 3.1e-106 389.0 247 76.9
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 4.1e-106 388.7 258 76.0
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 5.3e-106 388.3 258 75.2
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 1.2e-105 387.1 256 75.4
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 2.6e-105 386.0 252 77.8
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 7.7e-105 384.4 258 76.7
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 1.7e-104 383.3 258 76.4
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 1.7e-104 383.3 254 74.8
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 1.7e-104 383.3 247 76.1
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 3.8e-104 382.1 257 73.9
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 1.1e-103 380.6 249 77.9
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 1.1e-103 380.6 258 76.0
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 1.1e-103 380.6 230 79.1
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 1.9e-103 379.8 231 82.7
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 1.9e-103 379.8 257 74.3
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 2.5e-103 379.4 257 75.5
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 4.2e-103 378.6 253 75.9
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 4.2e-103 378.6 243 77.4
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 5.5e-103 378.3 261 73.2
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 7.2e-103 377.9 261 72.8
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 9.4e-103 377.5 239 77.4
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 2.1e-102 376.3 241 74.7
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 8.0e-102 374.4 251 76.5
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 1.0e-101 374.0 260 72.7
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 1.4e-101 373.6 264 72.7
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 1.8e-101 373.2 222 83.8
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 2.3e-101 372.9 243 75.3
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 4.0e-101 372.1 259 72.6
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 4.0e-101 372.1 229 79.9
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 8.8e-101 370.9 257 72.0
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 8.8e-101 370.9 281 67.6
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 2.0e-100 369.8 263 71.9
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 5.7e-100 368.2 260 72.7
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 5.7e-100 368.2 261 72.8
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 9.7e-100 367.5 251 74.1
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 9.7e-100 367.5 246 73.2
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 1.3e-99 367.1 257 71.2
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 2.8e-99 365.9 270 70.0
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 1.1e-98 364.0 234 76.5
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.4e-98 363.6 246 74.0
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 5.3e-98 361.7 247 73.7
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 5.3e-98 361.7 229 75.5
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 7.0e-98 361.3 231 76.6
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 1.2e-97 360.5 273 66.7
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 1.2e-97 360.5 261 70.1
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.6e-97 360.1 244 75.0
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.6e-97 360.1 271 68.6
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 2.0e-97 359.8 269 67.7
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 2.0e-97 359.8 244 75.0
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 3.5e-97 359.0 244 73.8
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 3.5e-97 359.0 261 69.7
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 2.2e-96 356.3 237 74.3
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 2.9e-96 355.9 241 72.2
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 2.9e-96 355.9 265 68.7
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 5.0e-96 355.1 272 66.9
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 6.5e-96 354.8 241 71.4
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 8.5e-96 354.4 267 67.0
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 1.1e-95 354.0 259 69.1
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 3.2e-95 352.4 264 68.2
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 3.2e-95 352.4 273 66.7
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 1.6e-94 350.1 267 67.0
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 1.6e-94 350.1 267 67.0
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 2.1e-94 349.7 258 69.0
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 2.7e-94 349.4 241 71.0
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 2.7e-94 349.4 259 69.5
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 3.6e-94 349.0 274 65.3
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 6.1e-94 348.2 243 71.2
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 2.3e-93 346.3 282 63.8
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 3.0e-93 345.9 251 66.9
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 4.0e-93 345.5 212 79.7
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 2.0e-92 343.2 230 70.0
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 2.2e-91 339.7 233 72.1
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 3.7e-91 339.0 247 66.8
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 6.3e-91 338.2 355 54.1
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 2.4e-90 336.3 213 76.1
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 4.1e-90 335.5 237 70.9
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 4.1e-90 335.5 216 76.9
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 9.1e-90 334.3 297 58.9
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 3.5e-89 332.4 208 77.4
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 4.5e-89 332.0 210 75.7
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 7.7e-89 331.3 235 71.5
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 1.0e-88 330.9 211 78.7
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 2.9e-88 329.3 208 76.0
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 8.5e-88 327.8 215 76.7
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 4.0e-85 318.9 198 78.8
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 1.3e-83 313.9 199 78.9
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 9.8e-76 287.7 201 68.2
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 5.4e-74 282.0 336 50.3
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 6.8e-69 265.0 227 60.4
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 1.7e-67 260.4 167 79.0
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 2.9e-67 259.6 174 73.6
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 3.3e-63 246.1 227 54.6
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 8.9e-61 238.0 235 50.6
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 1.1e-58 231.1 245 50.6
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 1.0e-56 224.6 152 71.1
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 3.1e-53 213.0 230 50.9
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 8.9e-53 211.5 136 77.2
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 2.5e-47 193.4 137 70.8
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 9.6e-47 191.4 146 69.2
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 2.8e-46 189.9 148 66.2
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 4.7e-46 189.1 146 68.5
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 2.4e-42 176.8 175 56.6
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 5.4e-42 175.6 117 76.1
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 1.0e-40 171.4 136 64.0
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 4.0e-37 159.5 125 67.2
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 9.3e-34 148.3 96 72.9
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 3.9e-32 142.9 95 73.7
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 1.5e-31 141.0 75 88.0
Nn8g40481 Nelumbo nucifera HOM05D005955 ORTHO05D007633 2.4e-26 123.6 77 75.3
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.5e-20 104.4 105 55.2
TPR.G7208 Trifolium pratense HOM05D005955 ORTHO05D007633 5.7e-15 85.9 47 76.6
PRCOL_00001745 Prasinoderma coloniale HOM05D005955 ORTHO05D007633 1.5e-12 77.8 171 29.2
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 2.0e-12 77.4 114 44.7
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 1.7e-11 74.3 114 43.9


User provided reference genes

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