Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G4864 Fragaria x ananassa HOM05D000343 ORTHO05D005934 8.4e-41 169.9 82 100.0
FAN23G0436 Fragaria x ananassa HOM05D000343 ORTHO05D005934 7.9e-15 83.6 54 77.8
FAN28G2108 Fragaria x ananassa HOM05D000343 ORTHO05D005934 7.9e-15 83.6 54 77.8
FAN28G2712 Fragaria x ananassa HOM05D000343 ORTHO05D005934 7.9e-15 83.6 54 77.8
RcHm_v2.0_Chr2g0106681 Rosa chinensis HOM05D000343 ORTHO05D005934 3.0e-14 81.6 53 77.4
FAN19G1868 Fragaria x ananassa HOM05D000343 ORTHO05D005934 8.7e-14 80.1 54 75.9
FAN26G1628 Fragaria x ananassa HOM05D000343 ORTHO05D005934 8.7e-14 80.1 54 75.9
PSO170G1378 Papaver somniferum HOM05D000343 ORTHO05D005934 1.9e-13 79.0 54 70.4
FvH4_1g16780 Fragaria vesca HOM05D000343 ORTHO05D005934 2.5e-13 78.6 54 74.1
PSO210G4728 Papaver somniferum HOM05D000343 ORTHO05D005934 2.5e-13 78.6 54 70.4
PSO675G6974 Papaver somniferum HOM05D000343 ORTHO05D005934 2.5e-13 78.6 54 70.4
Prupe.6G228900 Prunus persica HOM05D000343 ORTHO05D005934 2.5e-13 78.6 54 72.2
MD15G1288700 Malus domestica HOM05D000343 ORTHO05D005934 4.3e-13 77.8 55 70.9
Nn5g30422 Nelumbo nucifera HOM05D000343 ORTHO05D005934 4.3e-13 77.8 54 70.4
MD02G1179100 Malus domestica HOM05D000343 ORTHO05D005934 5.7e-13 77.4 54 70.4
TAR628G0541 Trochodendron aralioides HOM05D000343 ORTHO05D005934 5.7e-13 77.4 54 68.5
GSVIVG01000217001 Vitis vinifera HOM05D000343 ORTHO05D005934 5.7e-13 77.4 54 70.4
Cfa004063 Carpinus fangiana HOM05D000343 ORTHO05D005934 9.6e-13 76.6 54 70.4
Haze_15349 Corylus avellana HOM05D000343 ORTHO05D005934 9.6e-13 76.6 54 70.4
Atru.chr3.248 Acer truncatum HOM05D000343 ORTHO05D005934 1.3e-12 76.3 54 70.4
CANSAT25G2437 Cannabis sativa HOM05D000343 ORTHO05D005934 1.3e-12 76.3 54 68.5
arahy.Tifrunner.gnm1.ann1.FTH7SR Arachis hypogaea HOM05D000343 ORTHO05D005934 1.6e-12 75.9 54 68.5
Gohir.A11G220100 Gossypium hirsutum HOM05D000343 ORTHO05D005934 1.6e-12 75.9 54 70.4
Gohir.D11G203500 Gossypium hirsutum HOM05D000343 ORTHO05D005934 1.6e-12 75.9 54 70.4
Gorai.007G218200 Gossypium raimondii HOM05D000343 ORTHO05D005934 1.6e-12 75.9 54 70.4
TWI73G1114 Tripterygium wilfordii HOM05D000343 ORTHO05D005934 1.6e-12 75.9 54 66.7
ClCG02G007610 Citrullus lanatus HOM05D000343 ORTHO05D005934 2.1e-12 75.5 54 68.5
Ciclev10024910m.g Citrus clementina HOM05D000343 ORTHO05D005934 2.1e-12 75.5 54 68.5
MELO3C024722.2 Cucumis melo HOM05D000343 ORTHO05D005934 2.1e-12 75.5 54 68.5
CsaV3_2G036100 Cucumis sativus L. HOM05D000343 ORTHO05D005934 2.1e-12 75.5 54 68.5
CAN.G370.9 Capsicum annuum HOM05D000343 ORTHO05D005934 3.7e-12 74.7 53 69.8
Nitab4.5_0001373g0020 Nicotiana tabacum HOM05D000343 ORTHO05D005934 3.7e-12 74.7 53 69.8
Potri.007G049000 Populus trichocarpa HOM05D000343 ORTHO05D005934 3.7e-12 74.7 54 70.4
Thecc.01G063500 Theobroma cacao HOM05D000343 ORTHO05D005934 3.7e-12 74.7 54 68.5
ATR0691G268 Amborella trichopoda HOM05D000343 ORTHO05D005934 4.8e-12 74.3 53 67.9
Dinv30035 Davidia involucrata HOM05D000343 ORTHO05D005934 4.8e-12 74.3 53 67.9
Eucgr.H02227 Eucalyptus grandis HOM05D000343 ORTHO05D005934 4.8e-12 74.3 54 66.7
Psat4g082640 Pisum sativum HOM05D000343 ORTHO05D005934 4.8e-12 74.3 54 66.7
Sed0018175 Sechium edule HOM05D000343 ORTHO05D005934 4.8e-12 74.3 54 66.7
COL.COLO4_11485 Corchorus olitorius HOM05D000343 ORTHO05D005934 6.2e-12 73.9 54 66.7
Duzib147G0980 Durio zibethinus HOM05D000343 ORTHO05D005934 6.2e-12 73.9 54 68.5
Manes.12G108600 Manihot esculenta HOM05D000343 ORTHO05D005934 6.2e-12 73.9 54 68.5
Manes.13G118200 Manihot esculenta HOM05D000343 ORTHO05D005934 6.2e-12 73.9 54 66.7
Ca_01077_v3 Cicer arietinum L. HOM05D000343 ORTHO05D005934 8.2e-12 73.6 54 64.8
Sabra07G0043700 Salix brachista HOM05D000343 ORTHO05D005934 8.2e-12 73.6 54 70.4
Solyc02g092920.4 Solanum lycopersicum HOM05D000343 ORTHO05D005934 8.2e-12 73.6 53 67.9
Sopen02g037480 Solanum pennellii HOM05D000343 ORTHO05D005934 8.2e-12 73.6 53 67.9
PGSC0003DMG400024953 Solanum tuberosum HOM05D000343 ORTHO05D005934 8.2e-12 73.6 53 67.9
Aqoxy5G01142 Aquilegia oxysepala HOM05D000343 ORTHO05D005934 1.1e-11 73.2 55 63.6
PGR102G0332 Punica granatum HOM05D000343 ORTHO05D005934 1.1e-11 73.2 54 68.5
BcaNung02533 Brassica carinata HOM05D000343 ORTHO05D005934 1.4e-11 72.8 54 64.8
Lalb_Chr16g0388921 Lupinus albus HOM05D000343 ORTHO05D005934 1.4e-11 72.8 54 64.8
Peaxi162Scf00945g00216 Petunia axillaris HOM05D000343 ORTHO05D005934 1.4e-11 72.8 53 67.9
THA.LOC104807601 Tarenaya hassleriana HOM05D000343 ORTHO05D005934 1.4e-11 72.8 54 66.7
TPR.G23881 Trifolium pratense HOM05D000343 ORTHO05D005934 1.4e-11 72.8 54 64.8
CiPaw.01G012700 Carya illinoinensis HOM05D000343 ORTHO05D005934 1.8e-11 72.4 54 66.7
ClCG02G008150 Citrullus lanatus HOM05D000343 ORTHO05D005934 1.8e-11 72.4 54 64.8
MELO3C024800.2 Cucumis melo HOM05D000343 ORTHO05D005934 1.8e-11 72.4 54 64.8
Sed0000005 Sechium edule HOM05D000343 ORTHO05D005934 1.8e-11 72.4 54 64.8
HPP92_018306 Vanilla planifolia HOM05D000343 ORTHO05D005934 1.8e-11 72.4 53 64.2
HPP92_018309 Vanilla planifolia HOM05D000343 ORTHO05D005934 1.8e-11 72.4 53 64.2
Dinv26868 Davidia involucrata HOM05D000343 ORTHO05D005934 2.4e-11 72.0 53 66.0
Os06g0690700 Oryza sativa ssp. japonica HOM05D000343 ORTHO05D005934 2.4e-11 72.0 53 64.2
A01p01700 Brassica napus HOM05D000343 ORTHO05D005934 3.1e-11 71.6 54 64.8
C01p01870 Brassica napus HOM05D000343 ORTHO05D005934 3.1e-11 71.6 54 64.8
BolC1t00179H Brassica oleracea HOM05D000343 ORTHO05D005934 3.1e-11 71.6 54 64.8
BraA01t00161Z Brassica rapa HOM05D000343 ORTHO05D005934 3.1e-11 71.6 54 64.8
CARHR245650 Cardamine hirsuta HOM05D000343 ORTHO05D005934 3.1e-11 71.6 54 64.8
AUR62003941 Chenopodium quinoa HOM05D000343 ORTHO05D005934 3.1e-11 71.6 54 64.8
AUR62038256 Chenopodium quinoa HOM05D000343 ORTHO05D005934 3.1e-11 71.6 54 64.8
Migut.H00391 Erythranthe guttata HOM05D000343 ORTHO05D005934 3.1e-11 71.6 53 66.0
Medtr4g094985 Medicago truncatula HOM05D000343 ORTHO05D005934 3.1e-11 71.6 54 61.1
SGA_v2.0_scaffold143G35786 Striga asiatica HOM05D000343 ORTHO05D005934 3.1e-11 71.6 53 66.0
THA.LOC104804212 Tarenaya hassleriana HOM05D000343 ORTHO05D005934 3.1e-11 71.6 54 63.0
Zm00001eb226120 Zea mays HOM05D000343 ORTHO05D005934 3.1e-11 71.6 53 64.2
Cpa.g.sc6.97 Carica papaya HOM05D000343 ORTHO05D005934 4.0e-11 71.2 54 64.8
Lj4g0009488 Lotus japonicus HOM05D000343 ORTHO05D005934 4.0e-11 71.2 54 64.8
Phvul.003G240100 Phaseolus vulgaris HOM05D000343 ORTHO05D005934 4.0e-11 71.2 54 64.8
Cc07_g06460 Coffea canephora HOM05D000343 ORTHO05D005934 5.3e-11 70.9 53 66.0
Glyma.05G098800 Glycine max HOM05D000343 ORTHO05D005934 5.3e-11 70.9 54 64.8
Glyma.17G166800 Glycine max HOM05D000343 ORTHO05D005934 5.3e-11 70.9 54 64.8
CSS0024485 Camellia sinensis var. sinensis HOM05D000343 ORTHO05D005934 6.9e-11 70.5 53 64.2
Thhalv10024415m.g Eutrema salsugineum HOM05D000343 ORTHO05D005934 6.9e-11 70.5 54 63.0
Sp7g34930 Schrenkiella parvula HOM05D000343 ORTHO05D005934 6.9e-11 70.5 54 63.0
SEGI_37969 Sequoiadendron giganteum HOM05D000343 ORTHO05D005934 6.9e-11 70.5 53 60.4
unitig_62.g23417 Utricularia gibba HOM05D000343 ORTHO05D005934 6.9e-11 70.5 53 64.2
Aa31LG6G14140 Aethionema arabicum HOM05D002788 ORTHO05D005934 9.0e-11 70.1 54 63.0
HanXRQChr16g0529971 Helianthus annuus HOM05D000343 ORTHO05D005934 9.0e-11 70.1 54 61.1
Sc03g0001870 Simmondsia chinensis HOM05D000343 ORTHO05D005934 9.0e-11 70.1 53 66.0
Actinidia36461 Actinidia chinensis HOM05D000343 ORTHO05D005934 1.2e-10 69.7 53 62.3
Sp4g02270 Schrenkiella parvula HOM05D000343 ORTHO05D005934 1.2e-10 69.7 54 63.0
SMO353G0387 Selaginella moellendorffii HOM05D000343 ORTHO05D005934 1.2e-10 69.7 53 62.3
Hund13914 Selenicereus undatus HOM05D000343 ORTHO05D005934 1.2e-10 69.7 53 66.0
AL7G13570 Arabidopsis lyrata HOM05D000343 ORTHO05D005934 1.5e-10 69.3 54 61.1
AT4G37270 Arabidopsis thaliana HOM05D000343 ORTHO05D005934 1.5e-10 69.3 54 61.1
Carub.0007s0302 Capsella rubella HOM05D000343 ORTHO05D005934 1.5e-10 69.3 54 61.1
Carub.0004s0249 Capsella rubella HOM05D000343 ORTHO05D005934 2.0e-10 68.9 54 59.3
AagrBONN_evm.TU.Sc2ySwM_344.3236 Anthoceros agrestis HOM05D000343 ORTHO05D005934 2.6e-10 68.6 53 54.7
Thhalv10000049m.g Eutrema salsugineum HOM05D000343 ORTHO05D005934 2.6e-10 68.6 54 61.1
Lj4A156G48 Lonicera japonica HOM05D000343 ORTHO05D005934 2.6e-10 68.6 53 62.3
MSTRG.23712 Avicennia marina HOM05D000343 ORTHO05D005934 3.4e-10 68.2 53 62.3
ECA232G3783 Erigeron canadensis HOM05D000343 ORTHO05D005934 3.4e-10 68.2 53 58.5
EL10Ac6g15688 Beta vulgaris HOM05D000343 ORTHO05D005934 5.8e-10 67.4 53 62.3
Ah.02g125740 Amaranthus hybridus HOM05D000343 ORTHO05D005934 7.6e-10 67.0 54 61.1
A09p56970 Brassica napus HOM05D000343 ORTHO05D005934 7.6e-10 67.0 54 59.3
BraA09t41089Z Brassica rapa HOM05D000343 ORTHO05D005934 7.6e-10 67.0 54 59.3
Aa31LG7G13700 Aethionema arabicum HOM05D000343 ORTHO05D005934 1.0e-09 66.6 54 57.4
CARHR292870 Cardamine hirsuta HOM05D000343 ORTHO05D005934 1.3e-09 66.2 54 57.4
Lsat_1_v5_gn_4_164080 Lactuca sativa HOM05D000343 ORTHO05D005934 1.7e-09 65.9 53 56.6
Oeu013258.1 Olea europaea HOM05D000343 ORTHO05D005934 1.7e-09 65.9 53 62.3
DCAR_010852 Daucus carota HOM05D000343 ORTHO05D005934 2.2e-09 65.5 53 58.5
Mapoly0043s0122 Marchantia polymorpha HOM05D000343 ORTHO05D005934 2.2e-09 65.5 53 54.7
BcaC07g40992 Brassica carinata HOM05D000343 ORTHO05D005934 2.9e-09 65.1 54 57.4
AL4G13170 Arabidopsis lyrata HOM05D000343 ORTHO05D005934 3.8e-09 64.7 54 59.3
Hund16367 Selenicereus undatus HOM05D000343 ORTHO05D005934 3.8e-09 64.7 54 63.0
C08p39930 Brassica napus HOM05D000343 ORTHO05D005934 6.5e-09 63.9 53 56.6
BolC8t51567H Brassica oleracea HOM05D000343 ORTHO05D005934 6.5e-09 63.9 53 56.6
Pp3c3_31850 Physcomitrium patens HOM05D000343 ORTHO05D005934 1.9e-08 62.4 53 52.8
RhsimUnG0202900 Rhododendron simsii HOM05D000343 ORTHO05D005934 1.9e-08 62.4 60 56.7
CDE01G0174 Ceratophyllum demersum HOM05D000343 ORTHO05D005934 2.5e-08 62.0 42 69.0
Pp3c4_3060 Physcomitrium patens HOM05D000343 ORTHO05D005934 2.5e-08 62.0 53 54.7
CBR_g41425 Chara braunii HOM05D000343 ORTHO05D005934 1.2e-07 59.7 53 50.9
vmacro05253 Vaccinium macrocarpon HOM05D000343 ORTHO05D005934 1.2e-07 59.7 53 58.5
TAR376G0917 Trochodendron aralioides HOM05D000343 ORTHO05D005934 2.1e-07 58.9 38 71.1
Rhsim10G0112400 Rhododendron simsii HOM05D000343 ORTHO05D005934 3.5e-07 58.2 42 61.9
FvH4_4g18132 Fragaria vesca HOM05D014631 ORTHO05D003768 7.9e-07 57.0 31 80.6


User provided reference genes

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