Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G4040 Fragaria x ananassa HOM05D004374 ORTHO05D005430 9.7e-142 506.9 276 100.0
FAN05G4736 Fragaria x ananassa HOM05D004374 ORTHO05D005430 5.5e-137 491.1 275 91.6
FvH4_6g31820 Fragaria vesca HOM05D004374 ORTHO05D005430 3.0e-135 485.3 286 93.4
FAN02G2909 Fragaria x ananassa HOM05D004374 ORTHO05D005430 3.0e-135 485.3 287 94.8
FAN14G1328 Fragaria x ananassa HOM05D004374 ORTHO05D005430 1.5e-134 483.0 286 93.0
RcHm_v2.0_Chr2g0138971 Rosa chinensis HOM05D004374 ORTHO05D005430 1.7e-117 426.4 283 79.9
Prupe.1G493600 Prunus persica HOM05D004374 ORTHO05D005430 6.9e-79 298.1 293 54.6
MD05G1013300 Malus domestica HOM05D004374 ORTHO05D005430 5.1e-74 282.0 287 52.3
QL02p089838 Quercus lobata HOM05D004374 ORTHO05D005430 2.5e-73 279.6 289 54.0
TAR626G1960 Trochodendron aralioides HOM05D004374 ORTHO05D005430 3.6e-72 275.8 287 51.2
PGR042G2992 Punica granatum HOM05D004374 ORTHO05D005430 2.6e-70 269.6 292 46.9
CANSAT11G1308 Cannabis sativa HOM05D004374 ORTHO05D005430 4.9e-69 265.4 288 49.0
Cpa.g.sc46.39 Carica papaya HOM05D004374 ORTHO05D005430 4.9e-69 265.4 291 49.1
Cfa008808 Carpinus fangiana HOM05D004374 ORTHO05D005430 8.4e-69 264.6 260 52.7
Ciclev10032301m.g Citrus clementina HOM05D004374 ORTHO05D005430 8.4e-69 264.6 287 50.5
Potri.006G065800 Populus trichocarpa HOM05D004374 ORTHO05D005430 3.2e-68 262.7 257 52.9
Ciclev10002076m.g Citrus clementina HOM05D004374 ORTHO05D005430 1.2e-67 260.8 287 49.8
TWI34G0112 Tripterygium wilfordii HOM05D004374 ORTHO05D005430 2.1e-67 260.0 288 48.3
Dinv41475 Davidia involucrata HOM05D004374 ORTHO05D005430 2.7e-67 259.6 256 52.0
GSVIVG01015588001 Vitis vinifera HOM05D004374 ORTHO05D005430 7.9e-67 258.1 288 48.3
ClCG11G003340 Citrullus lanatus HOM05D004374 ORTHO05D005430 1.0e-66 257.7 288 48.3
TWI34G1386 Tripterygium wilfordii HOM05D004374 ORTHO05D005430 1.0e-66 257.7 289 48.4
Lj4g0025213 Lotus japonicus HOM05D004374 ORTHO05D005430 1.3e-66 257.3 289 50.2
Sabra06G0048000 Salix brachista HOM05D004374 ORTHO05D005430 1.5e-65 253.8 269 50.2
Hma1.2p1_1220F.1_g268070 Hydrangea macrophylla HOM05D004374 ORTHO05D005430 1.9e-65 253.4 256 50.4
Psat4g038960 Pisum sativum HOM05D004374 ORTHO05D005430 2.5e-65 253.1 288 47.2
Hma1.2p1_0343F.1_g130960 Hydrangea macrophylla HOM05D004374 ORTHO05D005430 5.6e-65 251.9 256 49.6
Rhsim01G0061800 Rhododendron simsii HOM05D004374 ORTHO05D005430 5.6e-65 251.9 254 51.2
arahy.Tifrunner.gnm1.ann1.RD7K84 Arachis hypogaea HOM05D004374 ORTHO05D005430 7.4e-65 251.5 286 47.6
Ca_06940_v3 Cicer arietinum L. HOM05D004374 ORTHO05D005430 7.4e-65 251.5 289 47.8
arahy.Tifrunner.gnm1.ann1.QKGT17 Arachis hypogaea HOM05D004374 ORTHO05D005430 1.3e-64 250.8 286 47.6
Duzib168G1544 Durio zibethinus HOM05D004374 ORTHO05D005430 2.1e-64 250.0 260 51.2
Glyma.13G159900 Glycine max HOM05D004374 ORTHO05D005430 2.8e-64 249.6 289 47.8
Migut.K00426 Erythranthe guttata HOM05D004374 ORTHO05D005430 4.8e-64 248.8 295 46.4
Gorai.009G015600 Gossypium raimondii HOM05D004374 ORTHO05D005430 4.8e-64 248.8 255 51.8
Medtr4g115320 Medicago truncatula HOM05D004374 ORTHO05D005430 4.8e-64 248.8 289 48.1
MELO3C004466.2 Cucumis melo HOM05D004374 ORTHO05D005430 6.2e-64 248.4 287 47.0
Gohir.D05G015500 Gossypium hirsutum HOM05D004374 ORTHO05D005430 6.2e-64 248.4 255 51.8
CsaV3_2G003190 Cucumis sativus L. HOM05D002754 ORTHO05D003271 8.1e-64 248.1 288 46.5
Thecc.09G131900 Theobroma cacao HOM05D004374 ORTHO05D005430 4.0e-63 245.7 255 51.0
Manes.06G047300 Manihot esculenta HOM05D004374 ORTHO05D005430 6.9e-63 245.0 256 48.8
Atru.chr12.84 Acer truncatum HOM05D004374 ORTHO05D005430 1.2e-62 244.2 286 46.9
AL5G21410 Arabidopsis lyrata HOM05D004374 ORTHO05D005430 1.2e-62 244.2 254 50.8
AT3G53270 Arabidopsis thaliana HOM05D004374 ORTHO05D005430 2.0e-62 243.4 254 51.6
Sed0026824 Sechium edule HOM05D004374 ORTHO05D005430 5.8e-62 241.9 297 48.8
Aqoxy4G00722 Aquilegia oxysepala HOM05D004374 ORTHO05D005430 7.6e-62 241.5 260 50.0
Lj3g0009396 Lotus japonicus HOM05D004374 ORTHO05D005430 1.7e-61 240.4 269 50.6
Nn8g39541 Nelumbo nucifera HOM05D004374 ORTHO05D005430 1.7e-61 240.4 292 46.9
Nitab4.5_0002008g0060 Nicotiana tabacum HOM05D004374 ORTHO05D005430 1.7e-61 240.4 254 49.6
Phvul.003G168700 Phaseolus vulgaris HOM05D004374 ORTHO05D005430 1.7e-61 240.4 289 46.4
Lalb_Chr12g0197301 Lupinus albus HOM05D004374 ORTHO05D005430 2.9e-61 239.6 288 44.4
Carub.0005s1981 Capsella rubella HOM05D004374 ORTHO05D005430 3.8e-61 239.2 253 49.4
Thhalv10010555m.g Eutrema salsugineum HOM05D004374 ORTHO05D005430 4.9e-61 238.8 289 46.4
Lalb_Chr13g0301591 Lupinus albus HOM05D004374 ORTHO05D005430 4.9e-61 238.8 286 45.8
ECA240G2062 Erigeron canadensis HOM05D004374 ORTHO05D005430 6.4e-61 238.4 260 46.9
TPR.G24785 Trifolium pratense HOM05D004374 ORTHO05D005430 1.9e-60 236.9 289 49.8
HanXRQChr06g0168691 Helianthus annuus HOM05D004374 ORTHO05D005430 3.2e-60 236.1 256 46.5
TAR383G0672 Trochodendron aralioides HOM05D004374 ORTHO05D005430 5.5e-60 235.3 239 51.0
Eucgr.C01384 Eucalyptus grandis HOM05D004374 ORTHO05D005430 7.1e-60 235.0 277 46.6
Peaxi162Scf00088g01332 Petunia axillaris HOM05D004374 ORTHO05D005430 7.1e-60 235.0 299 43.5
SGA_v2.0_scaffold154G37188 Striga asiatica HOM05D004374 ORTHO05D005430 9.3e-60 234.6 254 47.6
AL5G34180 Arabidopsis lyrata HOM05D004374 ORTHO05D005430 1.2e-59 234.2 273 47.6
BcaB02g07796 Brassica carinata HOM05D004374 ORTHO05D005430 2.1e-59 233.4 251 49.4
Lj3g0021552 Lotus japonicus HOM05D004374 ORTHO05D005430 3.5e-59 232.6 262 50.8
SalBow1G4424 Salvia bowleyana HOM05D004374 ORTHO05D005430 3.5e-59 232.6 255 50.6
Sc18g0000370 Simmondsia chinensis HOM05D004374 ORTHO05D005430 3.5e-59 232.6 257 50.2
Sopen07g003820 Solanum pennellii HOM05D004374 ORTHO05D005430 6.0e-59 231.9 254 47.2
Haze_11824 Corylus avellana HOM05D004374 ORTHO05D005430 7.9e-59 231.5 289 47.4
Cc06_g08080 Coffea canephora HOM05D004374 ORTHO05D005430 1.0e-58 231.1 253 45.8
Aa31LG9G14420 Aethionema arabicum HOM05D004374 ORTHO05D005430 1.3e-58 230.7 272 46.7
A07p21500 Brassica napus HOM05D004374 ORTHO05D005430 1.3e-58 230.7 251 48.2
BraA07t29837Z Brassica rapa HOM05D004374 ORTHO05D005430 1.3e-58 230.7 251 48.6
Sp5g09070 Schrenkiella parvula HOM05D004374 ORTHO05D005430 1.3e-58 230.7 249 49.4
Nitab4.5_0009218g0020 Nicotiana tabacum HOM05D004374 ORTHO05D005430 1.8e-58 230.3 312 43.3
THA.LOC104826552 Tarenaya hassleriana HOM05D004374 ORTHO05D005430 1.8e-58 230.3 255 48.2
ATR0307G110 Amborella trichopoda HOM05D004374 ORTHO05D005430 3.0e-58 229.6 253 47.0
DCAR_017779 Daucus carota HOM05D004374 ORTHO05D005430 3.0e-58 229.6 281 46.3
Dinv36480 Davidia involucrata HOM05D004374 ORTHO05D005430 3.0e-58 229.6 254 48.4
VMungo1215G2312 Vigna mungo HOM05D004374 ORTHO05D005430 3.9e-58 229.2 266 48.1
BolC6t37295H Brassica oleracea HOM05D004374 ORTHO05D005430 5.1e-58 228.8 251 48.2
C06p21110 Brassica napus HOM05D004374 ORTHO05D005430 6.7e-58 228.4 251 48.2
Solyc07g007940.3 Solanum lycopersicum HOM05D004374 ORTHO05D005430 8.7e-58 228.0 254 46.9
MSTRG.26430 Avicennia marina HOM05D004374 ORTHO05D005430 1.1e-57 227.6 256 45.3
Sp1g13120 Schrenkiella parvula HOM05D004374 ORTHO05D005430 1.5e-57 227.3 303 43.9
Zm00001eb030790 Zea mays HOM05D004374 ORTHO05D005430 3.3e-57 226.1 255 47.1
Zm00001eb030830 Zea mays HOM05D004374 ORTHO05D005430 3.3e-57 226.1 255 47.1
SGA_v2.0_scaffold138G35279 Striga asiatica HOM05D004374 ORTHO05D005430 4.3e-57 225.7 261 46.0
Lsat_1_v5_gn_7_43761 Lactuca sativa HOM05D004374 ORTHO05D005430 7.4e-57 224.9 253 44.7
Zm00001eb288690 Zea mays HOM05D004374 ORTHO05D005430 2.8e-56 223.0 255 46.3
MBI04_g39649_MAGBIO Magnolia biondii HOM05D004374 ORTHO05D005430 9.0e-55 218.0 268 45.9
AUR62011174 Chenopodium quinoa HOM05D004374 ORTHO05D005430 1.2e-54 217.6 256 44.5
vmacro15378 Vaccinium macrocarpon HOM05D004374 ORTHO05D005430 7.6e-54 214.9 227 48.5
CiPaw.05G118700 Carya illinoinensis HOM05D004374 ORTHO05D005430 1.0e-53 214.5 184 59.2
Nitab4.5_0005465g0010 Nicotiana tabacum HOM05D004374 ORTHO05D005430 1.3e-53 214.2 253 46.6
Medtr3g113180 Medicago truncatula HOM05D004374 ORTHO05D005430 2.2e-53 213.4 289 43.3
EL10Ac8g18718 Beta vulgaris HOM05D004374 ORTHO05D005430 2.9e-53 213.0 256 44.9
HPP92_020472 Vanilla planifolia HOM05D004374 ORTHO05D005430 1.4e-52 210.7 254 45.7
AUR62025401 Chenopodium quinoa HOM05D004374 ORTHO05D005430 1.9e-52 210.3 248 44.4
AUR62008844 Chenopodium quinoa HOM05D004374 ORTHO05D005430 4.2e-52 209.1 256 43.4
HPP92_026160 Vanilla planifolia HOM05D004374 ORTHO05D005430 4.2e-52 209.1 254 45.3
CAN.G1963.3 Capsicum annuum HOM05D004374 ORTHO05D005430 1.6e-51 207.2 343 38.2
PSO478G4198 Papaver somniferum HOM05D004374 ORTHO05D005430 3.5e-51 206.1 210 50.5
Os10g0493800 Oryza sativa ssp. japonica HOM05D004374 ORTHO05D005430 7.9e-51 204.9 255 44.7
Thhalv10000991m.g Eutrema salsugineum HOM05D004374 ORTHO05D005430 1.0e-50 204.5 249 45.4
CAN.G1315.2 Capsicum annuum HOM05D004374 ORTHO05D005430 7.4e-49 198.4 254 43.3
COL.COLO4_35152 Corchorus olitorius HOM05D004374 ORTHO05D005430 7.4e-49 198.4 257 43.2
vmacro07719 Vaccinium macrocarpon HOM05D004374 ORTHO05D005430 1.8e-47 193.7 390 32.3
SEGI_33846 Sequoiadendron giganteum HOM05D004374 ORTHO05D005430 2.4e-47 193.4 257 41.2
unitig_0.g2039 Utricularia gibba HOM05D004374 ORTHO05D005430 4.1e-47 192.6 302 37.1
Carub.0001s3232 Capsella rubella HOM05D004374 ORTHO05D005430 3.8e-45 186.0 253 41.5
Lj7A483G16 Lonicera japonica HOM05D004374 ORTHO05D005430 4.2e-44 182.6 176 52.3
Lj5A680G20 Lonicera japonica HOM05D004374 ORTHO05D005430 8.8e-42 174.9 176 51.1
arahy.Tifrunner.gnm1.ann1.9N6VAH Arachis hypogaea HOM05D004374 ORTHO05D005430 2.5e-41 173.3 186 46.8
Gohir.A05G014400 Gossypium hirsutum HOM05D004374 ORTHO05D005430 3.3e-41 172.9 180 50.6
PSO384G0227 Papaver somniferum HOM05D004374 ORTHO05D005430 1.1e-39 167.9 210 45.2
PSO017G1812 Papaver somniferum HOM05D004374 ORTHO05D005430 2.0e-38 163.7 231 40.7
Potri.004G126720 Populus trichocarpa HOM05D004374 ORTHO05D005430 2.7e-35 153.3 134 57.5
Hund26613 Selenicereus undatus HOM05D004374 ORTHO05D005430 3.6e-35 152.9 254 38.2
AUR62013310 Chenopodium quinoa HOM05D004374 ORTHO05D005430 7.9e-35 151.8 239 38.9
SEGI_36985 Sequoiadendron giganteum HOM05D004374 ORTHO05D005430 5.1e-34 149.1 256 34.8
PGSC0003DMG400030909 Solanum tuberosum HOM05D004374 ORTHO05D005430 6.3e-32 142.1 239 36.8
Pp3c16_3150 Physcomitrium patens HOM05D004374 ORTHO05D005430 1.3e-29 134.4 256 35.2
Nitab4.5_0000245g0220 Nicotiana tabacum HOM05D004374 ORTHO05D005430 7.2e-28 128.6 127 53.5
Mapoly0001s0311 Marchantia polymorpha HOM05D004374 ORTHO05D005430 4.7e-27 125.9 240 32.1
Oeu032455.1 Olea europaea HOM05D004374 ORTHO05D005430 5.2e-26 122.5 106 55.7
Potri.004G126760 Populus trichocarpa HOM05D004374 ORTHO05D005430 5.2e-26 122.5 184 39.1
AagrBONN_evm.TU.Sc2ySwM_228.3625 Anthoceros agrestis HOM05D004374 ORTHO05D005430 1.3e-24 117.9 242 31.4
arahy.Tifrunner.gnm1.ann1.8FF2M6 Arachis hypogaea HOM05D004374 ORTHO05D005430 1.8e-23 114.0 152 39.5
CSS0004446 Camellia sinensis var. sinensis HOM05D004374 ORTHO05D005430 7.0e-23 112.1 153 35.9
Actinidia40498 Actinidia chinensis HOM05D004374 ORTHO05D005430 1.2e-22 111.3 185 36.8
CAN.G778.6 Capsicum annuum HOM05D004374 ORTHO05D005430 2.2e-21 107.1 138 42.0
CARHR163170 Cardamine hirsuta HOM05D004374 ORTHO05D005430 3.8e-21 106.3 169 39.1
PGSC0003DMG400020805 Solanum tuberosum HOM05D004374 ORTHO05D005430 5.5e-20 102.4 163 36.8
Oeu032454.1 Olea europaea HOM05D004374 ORTHO05D005430 9.4e-20 101.7 141 36.9
Actinidia21955 Actinidia chinensis HOM05D004374 ORTHO05D005430 1.2e-19 101.3 88 55.7
Ah.09g224840 Amaranthus hybridus HOM05D004374 ORTHO05D005430 4.7e-19 99.4 178 33.1
Nitab4.5_0000245g0210 Nicotiana tabacum HOM05D004374 ORTHO05D005430 2.3e-18 97.1 135 40.0
Actinidia21954 Actinidia chinensis HOM05D004374 ORTHO05D005430 8.8e-18 95.1 129 37.2
CDE06G2323 Ceratophyllum demersum HOM05D004374 ORTHO05D005430 5.7e-17 92.4 290 26.6
CBR_g54313 Chara braunii HOM05D004374 ORTHO05D005430 4.8e-16 89.4 133 36.8
SMO358G0132 Selaginella moellendorffii HOM05D004374 ORTHO05D005430 4.8e-16 89.4 240 30.4
Hund26538 Selenicereus undatus HOM05D004374 ORTHO05D005430 1.8e-15 87.4 423 23.6
BcaC07g39690 Brassica carinata HOM05D004374 ORTHO05D005430 7.0e-15 85.5 144 34.7
RcHm_v2.0_Chr6g0296211 Rosa chinensis HOM05D004374 ORTHO05D005430 4.2e-12 76.3 106 43.4
SHI22473 Sapria himalayana HOM05D004374 ORTHO05D005430 4.2e-12 76.3 68 54.4
Nn8g39548 Nelumbo nucifera HOM05D004374 ORTHO05D005430 5.5e-12 75.9 111 41.4
TWI09G0688 Tripterygium wilfordii HOM05D004374 ORTHO05D005430 1.6e-11 74.3 225 27.1
CSS0024212 Camellia sinensis var. sinensis HOM05D004374 ORTHO05D005430 2.7e-11 73.6 67 53.7
C08p28500 Brassica napus HOM05D000209 ORTHO05D024195 3.6e-11 73.2 144 32.6
BolC8t50457H Brassica oleracea HOM05D000209 ORTHO05D024195 3.6e-11 73.2 144 32.6
CSS0046554 Camellia sinensis var. sinensis HOM05D004374 ORTHO05D005430 4.7e-11 72.8 66 57.6
CSS0020843 Camellia sinensis var. sinensis HOM05D004374 ORTHO05D005430 2.6e-09 67.0 222 27.0
A04p15700 Brassica napus HOM05D004374 ORTHO05D040369 5.7e-09 65.9 163 35.0
BcaB07g32803 Brassica carinata HOM05D000209 ORTHO05D000129 7.5e-09 65.5 63 50.8
C04p05170 Brassica napus HOM05D000111 ORTHO05D000134 8.3e-08 62.0 101 37.6
CARHR163160 Cardamine hirsuta HOM05D004374 ORTHO05D005430 1.4e-07 61.2 84 41.7
MCO01G198 Micromonas commoda HOM05D004374 ORTHO05D005430 9.1e-07 58.5 196 27.0


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