Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G1987 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.2e-121 441.4 674 100.0
FAN02G3519 Fragaria x ananassa HOM05D007405 ORTHO05D009256 8.5e-115 418.7 674 96.1
FAN14G0904 Fragaria x ananassa HOM05D007405 ORTHO05D009256 3.5e-108 396.7 674 96.4
FAN14G4765 Fragaria x ananassa HOM05D007405 ORTHO05D009256 3.5e-108 396.7 674 96.4
FAN05G4748 Fragaria x ananassa HOM05D007405 ORTHO05D009256 2.3e-104 384.0 655 87.2
FvH4_6g49520 Fragaria vesca HOM05D007405 ORTHO05D009256 4.4e-103 379.8 664 97.0
FAN02G3321 Fragaria x ananassa HOM05D007405 ORTHO05D009256 7.0e-93 345.9 188 96.3
RcHm_v2.0_Chr2g0169431 Rosa chinensis HOM05D007405 ORTHO05D009256 9.5e-74 282.3 683 86.1
Prupe.3G273600 Prunus persica HOM05D007405 ORTHO05D009256 2.9e-62 244.2 673 72.4
MD09G1044200 Malus domestica HOM05D007405 ORTHO05D009256 2.4e-56 224.6 673 84.5
Sopen02g032330 Solanum pennellii HOM05D007405 ORTHO05D009256 4.2e-53 213.8 559 80.5
Sabra17G0067600 Salix brachista HOM05D007405 ORTHO05D009256 2.3e-51 208.0 573 82.9
Cfa007501 Carpinus fangiana HOM05D007405 ORTHO05D009256 5.1e-51 206.8 584 78.1
Oeu027767.1 Olea europaea HOM05D007405 ORTHO05D009256 8.7e-51 206.1 625 83.5
Solyc02g087560.1 Solanum lycopersicum HOM05D007405 ORTHO05D009256 8.7e-51 206.1 548 81.2
GSVIVG01032591001 Vitis vinifera HOM05D007405 ORTHO05D009256 8.7e-51 206.1 567 82.7
ClCG10G014780 Citrullus lanatus HOM05D007405 ORTHO05D009256 1.1e-50 205.7 672 79.9
Potri.017G075700 Populus trichocarpa HOM05D007405 ORTHO05D009256 4.3e-50 203.8 573 83.1
Haze_14594 Corylus avellana HOM05D007405 ORTHO05D009256 3.6e-49 200.7 582 78.7
CANSAT64G0564 Cannabis sativa HOM05D007405 ORTHO05D009256 1.4e-48 198.7 576 79.7
QL02p079911 Quercus lobata HOM05D007405 ORTHO05D009256 3.1e-48 197.6 558 81.5
CiPaw.04G020600 Carya illinoinensis HOM05D007405 ORTHO05D009256 2.0e-47 194.9 578 79.4
AT5G39980 Arabidopsis thaliana HOM05D007405 ORTHO05D009256 4.4e-47 193.7 559 83.9
AL7G50110 Arabidopsis lyrata HOM05D007405 ORTHO05D009256 5.8e-47 193.4 565 83.0
CARHR262150 Cardamine hirsuta HOM05D007405 ORTHO05D009256 7.6e-47 193.0 569 82.4
CsaV3_3G041760 Cucumis sativus L. HOM05D007405 ORTHO05D009256 9.9e-47 192.6 536 80.6
Sp7g02090 Schrenkiella parvula HOM05D007405 ORTHO05D009256 9.9e-47 192.6 563 83.1
Lsat_1_v5_gn_2_90480 Lactuca sativa HOM05D007405 ORTHO05D009256 1.7e-46 191.8 557 82.4
MSTRG.19401 Avicennia marina HOM05D007405 ORTHO05D009256 4.9e-46 190.3 661 79.0
EL10Ac2g02615 Beta vulgaris HOM05D007405 ORTHO05D009256 4.9e-46 190.3 524 82.1
AUR62030576 Chenopodium quinoa HOM05D007405 ORTHO05D009256 6.4e-46 189.9 527 85.8
MELO3C009896.2 Cucumis melo HOM05D007405 ORTHO05D009256 8.4e-46 189.5 530 81.5
Migut.H00884 Erythranthe guttata HOM05D007405 ORTHO05D009256 2.4e-45 188.0 576 76.2
AUR62018305 Chenopodium quinoa HOM05D007405 ORTHO05D009256 3.2e-45 187.6 527 85.8
CSS0008879 Camellia sinensis var. sinensis HOM05D007405 ORTHO05D009256 2.1e-44 184.9 559 79.8
Nitab4.5_0002265g0130 Nicotiana tabacum HOM05D007405 ORTHO05D009256 6.0e-44 183.3 148 62.2
PGSC0003DMG400001306 Solanum tuberosum HOM05D007405 ORTHO05D009256 1.0e-43 182.6 576 87.2
CSS0011088 Camellia sinensis var. sinensis HOM05D007405 ORTHO05D009256 2.3e-43 181.4 479 87.3
VMungo1383G1541 Vigna mungo HOM05D007405 ORTHO05D009256 2.3e-43 181.4 509 82.5
Ah.10g031180 Amaranthus hybridus HOM05D007405 ORTHO05D009256 3.0e-43 181.0 525 81.3
CAN.G206.101 Capsicum annuum HOM05D007405 ORTHO05D009256 3.0e-43 181.0 142 64.8
TWI56G0828 Tripterygium wilfordii HOM05D007405 ORTHO05D009256 6.6e-43 179.9 182 57.7
Ciclev10011224m.g Citrus clementina HOM05D007405 ORTHO05D009256 1.1e-42 179.1 199 52.8
A07p20170 Brassica napus HOM05D007405 ORTHO05D009256 1.9e-42 178.3 184 56.5
Glyma.18G000700 Glycine max HOM05D007405 ORTHO05D009256 1.9e-42 178.3 516 80.6
HanXRQChr14g0449381 Helianthus annuus HOM05D007405 ORTHO05D009256 1.9e-42 178.3 139 60.4
Manes.17G025500 Manihot esculenta HOM05D007405 ORTHO05D009256 1.9e-42 178.3 177 56.5
Dinv33696 Davidia involucrata HOM05D007405 ORTHO05D009256 4.3e-42 177.2 564 66.0
Sed0003758 Sechium edule HOM05D007405 ORTHO05D009256 4.3e-42 177.2 558 77.4
Thhalv10028245m.g Eutrema salsugineum HOM05D007405 ORTHO05D009256 5.6e-42 176.8 200 53.0
SGA_v2.0_scaffold115G32153 Striga asiatica HOM05D007405 ORTHO05D009256 5.6e-42 176.8 187 53.5
BraA07t29716Z Brassica rapa HOM05D007405 ORTHO05D009256 9.6e-42 176.0 184 56.0
BcaC08g44440 Brassica carinata HOM05D007405 ORTHO05D009256 1.3e-41 175.6 188 52.7
C06p18840 Brassica napus HOM05D007405 ORTHO05D009256 1.3e-41 175.6 188 52.7
BolC6t37089H Brassica oleracea HOM05D007405 ORTHO05D009256 1.3e-41 175.6 188 52.7
Glyma.11G256300 Glycine max HOM05D007405 ORTHO05D009256 2.1e-41 174.9 514 81.7
Cc07_g02870 Coffea canephora HOM05D007405 ORTHO05D009256 2.8e-41 174.5 480 86.5
THA.LOC104823926 Tarenaya hassleriana HOM05D007405 ORTHO05D009256 8.1e-41 172.9 672 81.2
DCAR_011169 Daucus carota HOM05D007405 ORTHO05D009256 1.1e-40 172.6 181 54.1
Lj6g0001930 Lotus japonicus HOM05D007405 ORTHO05D009256 1.8e-40 171.8 140 62.1
Atru.chr8.2441 Acer truncatum HOM05D007405 ORTHO05D009256 3.1e-40 171.0 202 52.5
Aa31LG9G1630 Aethionema arabicum HOM05D000330 ORTHO05D009256 3.1e-40 171.0 568 80.6
Lj7A402T45 Lonicera japonica HOM05D007405 ORTHO05D009256 9.0e-40 169.5 570 70.5
Carub.0007s3571 Capsella rubella HOM05D007405 ORTHO05D009256 1.2e-39 169.1 557 82.8
BcaB02g07958 Brassica carinata HOM05D007405 ORTHO05D009256 7.6e-39 166.4 190 51.6
PGR031G2628 Punica granatum HOM05D007405 ORTHO05D009256 7.6e-39 166.4 113 71.7
Sc11g0006880 Simmondsia chinensis HOM05D007405 ORTHO05D009256 1.3e-38 165.6 561 79.5
TAR039G0001 Trochodendron aralioides HOM05D002295 ORTHO05D002789 1.3e-38 165.6 518 85.5
Lalb_Chr23g0278451 Lupinus albus HOM05D007405 ORTHO05D009256 1.7e-38 165.2 173 52.0
Duzib147G0736 Durio zibethinus HOM05D007405 ORTHO05D009256 4.9e-38 163.7 190 49.5
Gohir.D07G222200 Gossypium hirsutum HOM05D007405 ORTHO05D009256 1.9e-37 161.8 176 52.3
Gorai.001G256500 Gossypium raimondii HOM05D007405 ORTHO05D009256 1.9e-37 161.8 176 52.3
Thecc.04G073000 Theobroma cacao HOM05D007405 ORTHO05D009256 3.2e-37 161.0 188 50.0
Gohir.A07G215301 Gossypium hirsutum HOM05D007405 ORTHO05D009256 7.1e-37 159.8 192 49.5
Cpa.g.sc14.54 Carica papaya HOM05D007405 ORTHO05D009256 1.8e-35 155.2 99 75.8
Actinidia36037 Actinidia chinensis HOM05D007405 ORTHO05D009256 3.9e-35 154.1 666 70.3
TPR.G22753 Trifolium pratense HOM05D007405 ORTHO05D009256 2.5e-34 151.4 116 62.1
Nn1g09226 Nelumbo nucifera HOM05D007405 ORTHO05D009256 4.3e-34 150.6 143 55.9
COL.COLO4_25223 Corchorus olitorius HOM05D000330 ORTHO05D000209 5.6e-34 150.2 104 67.3
PSO832G3067 Papaver somniferum HOM05D007405 ORTHO05D009256 5.6e-34 150.2 487 88.3
Psat5g105040 Pisum sativum HOM05D007405 ORTHO05D009256 5.6e-34 150.2 191 46.1
Ca_16386_v3 Cicer arietinum L. HOM05D007405 ORTHO05D009256 9.6e-34 149.4 177 48.0
Ca_29700_v3 Cicer arietinum L. HOM05D007405 ORTHO05D009256 9.6e-34 149.4 177 48.0
Medtr3g083680 Medicago truncatula HOM05D007405 ORTHO05D009256 9.6e-34 149.4 106 64.2
PSO591G0419 Papaver somniferum HOM05D007405 ORTHO05D009256 4.0e-32 144.1 487 87.9
Rhsim10G0030900 Rhododendron simsii HOM05D007405 ORTHO05D009256 1.5e-31 142.1 95 70.5
MBI08_g09795_MAGBIO Magnolia biondii HOM05D007405 ORTHO05D009256 3.2e-29 134.4 180 75.0
Phvul.001G268500 Phaseolus vulgaris HOM05D007405 ORTHO05D009256 6.0e-28 130.2 72 83.3
Peaxi162Scf00129g00512 Petunia axillaris HOM05D007405 ORTHO05D009256 8.7e-27 126.3 72 81.9
CDE06G2170 Ceratophyllum demersum HOM05D007405 ORTHO05D009256 5.7e-26 123.6 177 64.4
ATR1127G129 Amborella trichopoda HOM05D007405 ORTHO05D009256 7.4e-26 123.2 176 43.8
Nitab4.5_0000564g0400 Nicotiana tabacum HOM05D007405 ORTHO05D009256 6.2e-25 120.2 66 84.8
HPP92_019727 Vanilla planifolia HOM05D007405 ORTHO05D009256 6.5e-22 110.2 144 43.8
SEGI_22031 Sequoiadendron giganteum HOM05D007405 ORTHO05D009256 1.3e-19 102.4 80 61.2
AagrBONN_evm.TU.Sc2ySwM_117.2241 Anthoceros agrestis HOM05D007405 ORTHO05D009256 4.3e-18 97.4 101 44.6
Pp3c3_5760 Physcomitrium patens HOM05D007405 ORTHO05D009256 7.4e-18 96.7 102 41.2
Pp3c3_5764 Physcomitrium patens HOM05D007405 ORTHO05D009256 7.4e-18 96.7 102 41.2
Eucgr.J02141 Eucalyptus grandis HOM05D007405 ORTHO05D009256 6.3e-17 93.6 53 83.0
Mapoly0061s0076 Marchantia polymorpha HOM05D007405 ORTHO05D009256 4.1e-16 90.9 95 44.2
Zm00001eb148940 Zea mays HOM05D007405 ORTHO05D009256 9.0e-16 89.7 69 58.0
Os01g0833000 Oryza sativa ssp. japonica HOM05D007405 ORTHO05D009256 1.3e-14 85.9 71 53.5
FAN02G2814 Fragaria x ananassa HOM05D007405 ORTHO05D009256 5.0e-14 84.0 40 100.0
SMO367G0452 Selaginella moellendorffii HOM05D007405 ORTHO05D009256 1.8e-11 75.5 59 57.6
Actinidia06062 Actinidia chinensis HOM05D007405 ORTHO05D009256 2.8e-09 68.2 74 55.4
FAN02G2590 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.1e-08 66.2 30 100.0
Actinidia06059 Actinidia chinensis HOM05D007405 ORTHO05D009256 2.0e-07 62.0 47 70.2
Actinidia06778 Actinidia chinensis HOM05D002479 ORTHO05D002675 7.7e-07 60.1 94 31.9
Actinidia07832 Actinidia chinensis HOM05D002479 ORTHO05D002675 7.7e-07 60.1 94 31.9
PGR004G1668 Punica granatum HOM05D002479 ORTHO05D002675 7.7e-07 60.1 94 33.0
DCAR_005281 Daucus carota HOM05D002479 ORTHO05D002675 1.0e-06 59.7 90 33.3
Sc19g0003840 Simmondsia chinensis HOM05D002479 ORTHO05D002675 3.8e-06 57.8 94 33.0


User provided reference genes

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