Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G1409 Fragaria x ananassa HOM05D005810 ORTHO05D007279 1.4e-96 356.3 179 100.0
FvH4_6g03330 Fragaria vesca HOM05D005810 ORTHO05D007279 9.6e-74 280.4 156 91.7
RcHm_v2.0_Chr3g0451831 Rosa chinensis HOM05D005810 ORTHO05D007279 3.8e-62 241.9 156 79.5
FAN05G1843 Fragaria x ananassa HOM05D005810 ORTHO05D007279 9.3e-61 237.3 128 94.5
MD04G1221700 Malus domestica HOM05D005810 ORTHO05D007279 9.0e-48 194.1 156 65.4
Prupe.6G340900 Prunus persica HOM05D005810 ORTHO05D007279 5.9e-47 191.4 156 66.0
QL03p024871 Quercus lobata HOM05D005810 ORTHO05D007279 1.1e-40 170.6 157 62.4
arahy.Tifrunner.gnm1.ann1.E80190 Arachis hypogaea HOM05D005810 ORTHO05D007279 3.8e-38 162.2 155 58.7
arahy.Tifrunner.gnm1.ann1.BBX725 Arachis hypogaea HOM05D005810 ORTHO05D007279 1.4e-37 160.2 155 58.1
Cfa006452 Carpinus fangiana HOM05D005810 ORTHO05D007279 3.2e-37 159.1 160 56.9
Glyma.03G245900 Glycine max HOM05D005810 ORTHO05D007279 7.9e-36 154.5 154 55.2
Duzib177G1000 Durio zibethinus HOM05D005810 ORTHO05D007279 1.8e-35 153.3 157 56.7
TPR.G6991 Trifolium pratense HOM05D005810 ORTHO05D007279 3.0e-35 152.5 160 54.4
Glyma.19G243400 Glycine max HOM05D005810 ORTHO05D007279 8.8e-35 151.0 154 53.9
Potri.005G051400 Populus trichocarpa HOM05D005810 ORTHO05D007279 2.0e-34 149.8 161 54.7
CSS0013071 Camellia sinensis var. sinensis HOM05D005810 ORTHO05D007279 2.6e-34 149.4 158 57.0
Lj1g0027742 Lotus japonicus HOM05D005810 ORTHO05D007279 5.7e-34 148.3 157 55.4
VMungo0222G0001 Vigna mungo HOM05D005810 ORTHO05D007279 9.7e-34 147.5 162 53.7
Thecc.05G287300 Theobroma cacao HOM05D005810 ORTHO05D007279 1.7e-33 146.7 157 55.4
CANSAT54G2140 Cannabis sativa HOM05D005810 ORTHO05D007279 2.2e-33 146.4 156 55.8
Phvul.006G100200 Phaseolus vulgaris HOM05D005810 ORTHO05D007279 2.2e-33 146.4 156 54.5
Ciclev10003382m.g Citrus clementina HOM05D005810 ORTHO05D007279 6.3e-33 144.8 157 55.4
GSVIVG01021833001 Vitis vinifera HOM05D005810 ORTHO05D007279 2.4e-32 142.9 158 54.4
Haze_04340 Corylus avellana HOM05D005810 ORTHO05D007279 3.1e-32 142.5 152 53.9
Dinv13660 Davidia involucrata HOM05D005810 ORTHO05D007279 4.1e-32 142.1 158 52.5
Cpa.g.sc117.72 Carica papaya HOM05D005810 ORTHO05D007279 7.0e-32 141.4 157 54.1
Ca_09411_v3 Cicer arietinum L. HOM05D005810 ORTHO05D007279 1.2e-31 140.6 155 51.0
COL.COLO4_15299 Corchorus olitorius HOM05D005810 ORTHO05D007279 1.2e-31 140.6 157 54.8
Psat3g008040 Pisum sativum HOM05D005810 ORTHO05D007279 1.2e-31 140.6 162 51.2
CSS0027419 Camellia sinensis var. sinensis HOM05D005810 ORTHO05D007279 1.5e-31 140.2 158 55.1
Nitab4.5_0005059g0010 Nicotiana tabacum HOM05D005810 ORTHO05D007279 3.5e-31 139.0 158 54.4
Gohir.A11G254200 Gossypium hirsutum HOM05D005810 ORTHO05D007279 7.7e-31 137.9 157 54.1
THA.LOC104821678 Tarenaya hassleriana HOM05D005810 ORTHO05D007279 6.5e-30 134.8 157 47.8
Lalb_Chr18g0045021 Lupinus albus HOM05D005810 ORTHO05D007279 1.1e-29 134.0 161 50.3
Medtr7g114850 Medicago truncatula HOM05D005810 ORTHO05D007279 1.1e-29 134.0 160 51.9
MELO3C024669.2 Cucumis melo HOM05D005810 ORTHO05D007279 1.5e-29 133.7 160 49.4
Gohir.D11G264000 Gossypium hirsutum HOM05D005810 ORTHO05D007279 1.5e-29 133.7 157 52.9
Gorai.007G284000 Gossypium raimondii HOM05D005810 ORTHO05D007279 7.2e-29 131.3 157 52.2
Aqoxy5G00419 Aquilegia oxysepala HOM05D005810 ORTHO05D007279 3.6e-28 129.0 157 51.0
CsaV3_UNG004060 Cucumis sativus L. HOM05D005810 ORTHO05D007279 4.7e-28 128.6 174 46.0
PSO210G1835 Papaver somniferum HOM05D005810 ORTHO05D007279 4.7e-28 128.6 156 48.7
ClCG06G009190 Citrullus lanatus HOM05D005810 ORTHO05D007279 6.1e-28 128.3 157 49.0
Migut.B01074 Erythranthe guttata HOM05D005810 ORTHO05D007279 6.1e-28 128.3 164 50.0
Rhsim05G0160900 Rhododendron simsii HOM05D005810 ORTHO05D007279 6.1e-28 128.3 166 49.4
PGR031G1118 Punica granatum HOM05D005810 ORTHO05D007279 1.8e-27 126.7 155 47.7
AT3G04820 Arabidopsis thaliana HOM05D005810 ORTHO05D007279 2.3e-27 126.3 157 47.8
PSO832G3650 Papaver somniferum HOM05D005810 ORTHO05D007279 2.3e-27 126.3 158 45.6
ATR0665G477 Amborella trichopoda HOM05D005810 ORTHO05D007279 5.2e-27 125.2 156 48.1
Oeu060673.3 Olea europaea HOM05D005810 ORTHO05D007279 5.2e-27 125.2 162 49.4
CARHR079070 Cardamine hirsuta HOM05D005810 ORTHO05D007279 6.7e-27 124.8 156 46.8
Carub.0003s0400 Capsella rubella HOM05D005810 ORTHO05D007279 8.8e-27 124.4 156 48.1
TAR365G0727 Trochodendron aralioides HOM05D005810 ORTHO05D007279 2.6e-26 122.9 152 50.7
Sopen01g041220 Solanum pennellii HOM05D005810 ORTHO05D007279 3.3e-26 122.5 156 49.4
AL3G14980 Arabidopsis lyrata HOM05D005810 ORTHO05D007279 4.4e-26 122.1 157 47.1
Lj7C488G4 Lonicera japonica HOM05D005810 ORTHO05D007279 5.7e-26 121.7 156 49.4
Aa31LG5G15210 Aethionema arabicum HOM05D005810 ORTHO05D007279 1.3e-25 120.6 157 47.8
ClCG06G009160 Citrullus lanatus HOM05D005810 ORTHO05D007279 2.2e-25 119.8 149 47.7
Sed0015078 Sechium edule HOM05D005810 ORTHO05D007279 2.2e-25 119.8 156 46.2
Cc02_g31840 Coffea canephora HOM05D005810 ORTHO05D007279 2.8e-25 119.4 156 49.4
Eucgr.B01694 Eucalyptus grandis HOM05D005810 ORTHO05D007279 3.7e-25 119.0 158 46.2
BcaB04g19298 Brassica carinata HOM05D005810 ORTHO05D007279 6.3e-25 118.2 156 45.5
unitig_37.g12634 Utricularia gibba HOM05D005810 ORTHO05D007279 6.3e-25 118.2 158 44.3
MD12G1237800 Malus domestica HOM05D005810 ORTHO05D007279 8.2e-25 117.9 88 62.5
BcaC01g04347 Brassica carinata HOM05D005810 ORTHO05D007279 1.4e-24 117.1 156 46.8
BolC3t16404H Brassica oleracea HOM05D005810 ORTHO05D007279 1.4e-24 117.1 156 46.8
BraA03t12559Z Brassica rapa HOM05D005810 ORTHO05D007279 1.4e-24 117.1 156 46.8
Sp3g03650 Schrenkiella parvula HOM05D005810 ORTHO05D007279 1.8e-24 116.7 156 44.9
Hma1.2p1_0083F.1_g042850 Hydrangea macrophylla HOM05D005810 ORTHO05D007279 3.1e-24 115.9 149 49.0
AUR62004921 Chenopodium quinoa HOM05D005810 ORTHO05D007279 7.0e-24 114.8 149 47.7
Eucgr.B02108 Eucalyptus grandis HOM05D005810 ORTHO05D007279 9.1e-24 114.4 157 46.5
CAN.G134.120 Capsicum annuum HOM05D005810 ORTHO05D007279 1.2e-23 114.0 151 48.3
CsaV3_1G045610 Cucumis sativus L. HOM05D005810 ORTHO05D007279 4.5e-23 112.1 165 43.0
AUR62001034 Chenopodium quinoa HOM05D005810 ORTHO05D007279 1.7e-22 110.2 149 47.0
Nitab4.5_0005729g0070 Nicotiana tabacum HOM05D005810 ORTHO05D007279 1.7e-22 110.2 158 45.6
HPP92_028013 Vanilla planifolia HOM05D005810 ORTHO05D007279 3.8e-22 109.0 160 40.0
vmacro14215 Vaccinium macrocarpon HOM05D005810 ORTHO05D007279 5.0e-22 108.6 175 40.6
ECA232G3974 Erigeron canadensis HOM05D005810 ORTHO05D007279 6.5e-22 108.2 156 42.9
DCAR_006618 Daucus carota HOM05D005810 ORTHO05D007279 1.1e-21 107.5 153 44.4
SalBow8G0563 Salvia bowleyana HOM05D005810 ORTHO05D007279 1.5e-21 107.1 157 45.2
A03p33850 Brassica napus HOM05D005810 ORTHO05D007279 2.1e-20 103.2 149 44.3
C03p41160 Brassica napus HOM05D005810 ORTHO05D007279 2.1e-20 103.2 149 44.3
Thhalv10022286m.g Eutrema salsugineum HOM05D005810 ORTHO05D007279 3.6e-20 102.4 147 41.5
Ah.06g192190 Amaranthus hybridus HOM05D005810 ORTHO05D007279 8.0e-20 101.3 161 43.5
CDE05G3473 Ceratophyllum demersum HOM05D005810 ORTHO05D007279 2.3e-19 99.8 154 40.9
HanXRQChr12g0379621 Helianthus annuus HOM05D005810 ORTHO05D007279 1.2e-18 97.4 160 40.6
Zm00001eb328420 Zea mays HOM05D005810 ORTHO05D007279 1.5e-18 97.1 155 39.4
AagrBONN_evm.TU.Sc2ySwM_362.2882 Anthoceros agrestis HOM05D005810 ORTHO05D007279 2.0e-18 96.7 164 40.9
EL10Ac4g09107 Beta vulgaris HOM05D005810 ORTHO05D007279 2.6e-18 96.3 148 42.6
MBI11_g10322_MAGBIO Magnolia biondii HOM05D005810 ORTHO05D007279 4.4e-18 95.5 122 47.5
Hund06958 Selenicereus undatus HOM05D005810 ORTHO05D007279 4.8e-17 92.0 125 46.4
Atru.chr2.785 Acer truncatum HOM05D005810 ORTHO05D007279 2.0e-15 86.7 89 53.9
Mapoly0092s0013 Marchantia polymorpha HOM05D005810 ORTHO05D007279 2.9e-14 82.8 164 36.0
Pp3c18_8560 Physcomitrium patens HOM05D005810 ORTHO05D007279 5.0e-14 82.0 164 37.8
Peaxi162Scf00282g00136 Petunia axillaris HOM05D005810 ORTHO05D007279 7.2e-13 78.2 118 45.8
SMO351G0210 Selaginella moellendorffii HOM05D005810 ORTHO05D007279 2.6e-10 69.7 155 31.6
CiPaw.07G064900 Carya illinoinensis HOM05D005810 ORTHO05D007279 3.4e-10 69.3 37 94.6
MCO09G788 Micromonas commoda HOM05D005810 ORTHO05D007279 5.4e-08 62.0 152 31.6
SMO364G0521 Selaginella moellendorffii HOM05D005810 ORTHO05D007279 2.7e-07 59.7 149 30.9
PRCOL_00005025 Prasinoderma coloniale HOM05D005810 ORTHO05D007279 2.3e-06 56.6 173 27.7


User provided reference genes

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