Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN09G1296 Fragaria x ananassa HOM05D003953 ORTHO05D004618 6.0e-91 337.4 162 100.0
RcHm_v2.0_Chr2g0128821 Rosa chinensis HOM05D003953 ORTHO05D004618 8.2e-48 194.1 160 64.4
FAN02G2926 Fragaria x ananassa HOM05D003953 ORTHO05D004618 1.8e-47 193.0 160 65.0
FAN06G2211 Fragaria x ananassa HOM05D003953 ORTHO05D004618 1.5e-46 189.9 160 61.9
FAN14G2908 Fragaria x ananassa HOM05D003953 ORTHO05D004618 1.5e-46 189.9 160 63.8
FAN05G4346 Fragaria x ananassa HOM05D003953 ORTHO05D004618 2.6e-46 189.1 157 64.3
FvH4_7g06540 Fragaria vesca HOM05D003953 ORTHO05D004618 7.7e-46 187.6 160 61.2
FAN01G1905 Fragaria x ananassa HOM05D003953 ORTHO05D004618 7.7e-46 187.6 160 61.2
FAN10G1677 Fragaria x ananassa HOM05D003953 ORTHO05D004618 7.7e-46 187.6 160 61.2
FAN03G1864 Fragaria x ananassa HOM05D003953 ORTHO05D004618 3.8e-45 185.3 160 60.6
RcHm_v2.0_Chr1g0334971 Rosa chinensis HOM05D003953 ORTHO05D004618 5.0e-45 184.9 160 60.6
MD10G1078400 Malus domestica HOM05D003953 ORTHO05D004618 6.7e-42 174.5 162 57.4
Prupe.3G125300 Prunus persica HOM05D003953 ORTHO05D004618 7.4e-41 171.0 162 56.8
Glyma.18G281100 Glycine max HOM05D003953 ORTHO05D004618 1.5e-33 146.7 161 48.4
GSVIVG01024830001 Vitis vinifera HOM05D003953 ORTHO05D004618 7.4e-33 144.4 158 50.0
arahy.Tifrunner.gnm1.ann1.X5K85D Arachis hypogaea HOM05D003953 ORTHO05D004618 9.7e-33 144.1 158 48.1
TWI79G0904 Tripterygium wilfordii HOM05D003953 ORTHO05D004618 9.7e-33 144.1 157 47.1
MBI04_g47172_MAGBIO Magnolia biondii HOM05D003953 ORTHO05D004618 1.7e-32 143.3 158 48.1
TWI75G1138 Tripterygium wilfordii HOM05D003953 ORTHO05D004618 1.7e-32 143.3 157 47.1
Psat3g190320 Pisum sativum HOM05D003953 ORTHO05D004618 2.2e-32 142.9 157 47.8
TPR.G4479 Trifolium pratense HOM05D003953 ORTHO05D004618 2.2e-32 142.9 157 48.4
arahy.Tifrunner.gnm1.ann1.4A8T0Q Arachis hypogaea HOM05D003953 ORTHO05D004618 3.7e-32 142.1 158 48.1
arahy.Tifrunner.gnm1.ann1.DA7VUD Arachis hypogaea HOM05D003953 ORTHO05D004618 3.7e-32 142.1 158 48.1
arahy.Tifrunner.gnm1.ann1.DBQJ9M Arachis hypogaea HOM05D003953 ORTHO05D004618 3.7e-32 142.1 158 48.1
Glyma.19G045500 Glycine max HOM05D003953 ORTHO05D004618 4.8e-32 141.7 151 47.7
Lj6g0017568 Lotus japonicus HOM05D003953 ORTHO05D004618 2.4e-31 139.4 158 47.5
ATR1136G184 Amborella trichopoda HOM05D003953 ORTHO05D004618 4.1e-31 138.7 154 48.1
Lj1g0022776 Lotus japonicus HOM05D003953 ORTHO05D004618 5.3e-31 138.3 158 46.8
Oeu042438.1 Olea europaea HOM05D003953 ORTHO05D004618 5.3e-31 138.3 157 46.5
Phvul.008G020000 Phaseolus vulgaris HOM05D003953 ORTHO05D004618 5.3e-31 138.3 147 48.3
Medtr7g020830 Medicago truncatula HOM05D003953 ORTHO05D004618 7.0e-31 137.9 152 48.0
TAR369G1135 Trochodendron aralioides HOM05D003953 ORTHO05D004618 7.0e-31 137.9 158 46.8
ClCG03G002440 Citrullus lanatus HOM05D003953 ORTHO05D004618 1.2e-30 137.1 158 44.9
Duzib150G0459 Durio zibethinus HOM05D003953 ORTHO05D004618 1.2e-30 137.1 159 46.5
Migut.M00943 Erythranthe guttata HOM05D003953 ORTHO05D004618 1.2e-30 137.1 162 45.7
CDE05G3507 Ceratophyllum demersum HOM05D003953 ORTHO05D004618 2.0e-30 136.3 160 46.2
Dinv06204 Davidia involucrata HOM05D003953 ORTHO05D004618 2.0e-30 136.3 158 45.6
Gorai.003G126400 Gossypium raimondii HOM05D003953 ORTHO05D004618 2.0e-30 136.3 159 45.9
Sopen06g001840 Solanum pennellii HOM05D003953 ORTHO05D004618 2.0e-30 136.3 158 44.9
Gohir.D03G119900 Gossypium hirsutum HOM05D003953 ORTHO05D004618 2.6e-30 136.0 159 45.3
MSTRG.7467 Avicennia marina HOM05D003953 ORTHO05D004618 3.5e-30 135.6 158 44.3
CANSAT54G2674 Cannabis sativa HOM05D003953 ORTHO05D004618 3.5e-30 135.6 157 47.8
CsaV3_1G013120 Cucumis sativus L. HOM05D003953 ORTHO05D004618 4.5e-30 135.2 158 44.3
CsaV3_1G035860 Cucumis sativus L. HOM05D003953 ORTHO05D004618 4.5e-30 135.2 150 46.7
Gohir.A03G047300 Gossypium hirsutum HOM05D003953 ORTHO05D004618 4.5e-30 135.2 159 45.3
Gorai.004G180400 Gossypium raimondii HOM05D003953 ORTHO05D004618 5.9e-30 134.8 159 45.9
Nitab4.5_0000880g0090 Nicotiana tabacum HOM05D003953 ORTHO05D004618 5.9e-30 134.8 158 44.3
ClCG03G001080 Citrullus lanatus HOM05D003953 ORTHO05D004618 7.7e-30 134.4 148 46.6
Hma1.2p1_0274F.1_g110300 Hydrangea macrophylla HOM05D003953 ORTHO05D004618 7.7e-30 134.4 157 45.2
PGSC0003DMG400020825 Solanum tuberosum HOM05D003953 ORTHO05D004618 7.7e-30 134.4 158 44.9
CDE05G2370 Ceratophyllum demersum HOM05D003953 ORTHO05D004618 1.3e-29 133.7 158 46.2
Nn2g13557 Nelumbo nucifera HOM05D003953 ORTHO05D004618 1.3e-29 133.7 158 45.6
Nitab4.5_0002405g0070 Nicotiana tabacum HOM05D003953 ORTHO05D004618 1.3e-29 133.7 158 43.7
Thecc.09G309300 Theobroma cacao HOM05D003953 ORTHO05D004618 1.3e-29 133.7 159 45.3
Gorai.006G047400 Gossypium raimondii HOM05D003953 ORTHO05D004618 1.7e-29 133.3 159 45.3
Gorai.008G072300 Gossypium raimondii HOM05D003953 ORTHO05D004618 1.7e-29 133.3 159 45.3
Cc09_g02060 Coffea canephora HOM05D003953 ORTHO05D004618 2.2e-29 132.9 158 43.7
Duzib168G1059 Durio zibethinus HOM05D003953 ORTHO05D004618 2.2e-29 132.9 159 45.3
vmacro03011 Vaccinium macrocarpon HOM05D003953 ORTHO05D004618 2.9e-29 132.5 154 45.5
SalBow1G5086 Salvia bowleyana HOM05D003953 ORTHO05D004618 3.8e-29 132.1 157 42.0
SalBow8G2167 Salvia bowleyana HOM05D003953 ORTHO05D004618 3.8e-29 132.1 157 42.0
SalBow8G3221 Salvia bowleyana HOM05D003953 ORTHO05D004618 3.8e-29 132.1 157 42.0
Ciclev10029631m.g Citrus clementina HOM05D003953 ORTHO05D004618 5.0e-29 131.7 162 43.8
unitig_92.g28151 Utricularia gibba HOM05D003953 ORTHO05D004618 5.0e-29 131.7 150 45.3
CSS0034778 Camellia sinensis var. sinensis HOM05D003953 ORTHO05D004618 8.5e-29 131.0 158 43.7
Prupe.2G047700 Prunus persica HOM05D003953 ORTHO05D004618 8.5e-29 131.0 162 47.5
Gohir.A08G112100 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.1e-28 130.6 159 45.3
Manes.01G166500 Manihot esculenta HOM05D003953 ORTHO05D004618 1.1e-28 130.6 153 43.8
Sed0019378 Sechium edule HOM05D003953 ORTHO05D004618 1.1e-28 130.6 157 42.7
Gohir.D05G283601 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.5e-28 130.2 159 44.7
Gohir.D05G283900 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.5e-28 130.2 159 44.7
Lalb_Chr21g0317911 Lupinus albus HOM05D003953 ORTHO05D004618 1.5e-28 130.2 148 45.9
Os12g0194700 Oryza sativa ssp. japonica HOM05D003953 ORTHO05D004618 1.5e-28 130.2 161 42.2
PGSC0003DMG400013346 Solanum tuberosum HOM05D003953 ORTHO05D004618 1.5e-28 130.2 158 43.0
Gohir.D04G155200 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.9e-28 129.8 159 44.7
Rhsim13G0075300 Rhododendron simsii HOM05D003953 ORTHO05D004618 1.9e-28 129.8 156 42.9
Gohir.D09G041350 Gossypium hirsutum HOM05D003953 ORTHO05D004618 2.5e-28 129.4 159 44.7
Aqoxy128s009 Aquilegia oxysepala HOM05D003953 ORTHO05D004618 3.2e-28 129.0 160 45.0
CiPaw.13G084200 Carya illinoinensis HOM05D003953 ORTHO05D004618 3.2e-28 129.0 153 46.4
Gorai.009G298400 Gossypium raimondii HOM05D003953 ORTHO05D004618 3.2e-28 129.0 159 44.7
Sed0025309 Sechium edule HOM05D003953 ORTHO05D004618 3.2e-28 129.0 158 43.7
Gohir.D09G041300 Gossypium hirsutum HOM05D003953 ORTHO05D004618 4.2e-28 128.6 159 44.7
COL.COLO4_19069 Corchorus olitorius HOM05D003953 ORTHO05D004618 5.5e-28 128.3 152 44.1
Hma1.2p1_0543F.1_g175312 Hydrangea macrophylla HOM05D003953 ORTHO05D004618 5.5e-28 128.3 157 43.3
Hma1.2p1_0543F.1_g175340 Hydrangea macrophylla HOM05D003953 ORTHO05D004618 5.5e-28 128.3 157 43.3
DCAR_015642 Daucus carota HOM05D003953 ORTHO05D004618 9.4e-28 127.5 150 44.0
SEGI_41348 Sequoiadendron giganteum HOM05D003953 ORTHO05D004618 9.4e-28 127.5 158 41.8
CAN.G1186.33 Capsicum annuum HOM05D003953 ORTHO05D004618 1.2e-27 127.1 159 42.1
Cfa011625 Carpinus fangiana HOM05D003953 ORTHO05D004618 1.2e-27 127.1 148 45.9
Haze_24228 Corylus avellana HOM05D003953 ORTHO05D004618 1.2e-27 127.1 148 45.9
Cfa020872 Carpinus fangiana HOM05D003953 ORTHO05D004618 1.6e-27 126.7 148 45.3
Gohir.D07G180800 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.6e-27 126.7 159 43.4
Gorai.011G189400 Gossypium raimondii HOM05D003953 ORTHO05D004618 1.6e-27 126.7 153 45.1
Oeu001049.1 Olea europaea HOM05D003953 ORTHO05D004618 1.6e-27 126.7 147 45.6
Peaxi162Scf00123g01014 Petunia axillaris HOM05D003953 ORTHO05D004618 1.6e-27 126.7 150 44.0
Sabra16G0149700 Salix brachista HOM05D003953 ORTHO05D004618 1.6e-27 126.7 147 44.2
SGA_v2.0_scaffold44G16545 Striga asiatica HOM05D003953 ORTHO05D004618 2.1e-27 126.3 158 41.8
Sopen11g006990 Solanum pennellii HOM05D003953 ORTHO05D004618 2.7e-27 125.9 158 41.1
Gohir.A06G113000 Gossypium hirsutum HOM05D003953 ORTHO05D004618 4.7e-27 125.2 159 43.4
Gohir.A06G119302 Gossypium hirsutum HOM05D003953 ORTHO05D004618 4.7e-27 125.2 159 43.4
Gohir.A12G147900 Gossypium hirsutum HOM05D003953 ORTHO05D004618 4.7e-27 125.2 159 43.4
Gohir.D04G005500 Gossypium hirsutum HOM05D003953 ORTHO05D004618 4.7e-27 125.2 159 43.4
Gohir.D07G184100 Gossypium hirsutum HOM05D003953 ORTHO05D004618 4.7e-27 125.2 159 43.4
Potri.001G246600 Populus trichocarpa HOM05D003953 ORTHO05D004618 4.7e-27 125.2 147 43.5
Gohir.D11G224100 Gossypium hirsutum HOM05D003953 ORTHO05D004618 6.1e-27 124.8 149 45.0
Lalb_Chr21g0317731 Lupinus albus HOM05D003953 ORTHO05D004618 6.1e-27 124.8 157 44.6
Solyc11g012195.1 Solanum lycopersicum HOM05D003953 ORTHO05D004618 6.1e-27 124.8 158 40.5
Gohir.D07G180600 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.4e-26 123.6 159 42.8
THA.LOC104800713 Tarenaya hassleriana HOM05D003953 ORTHO05D004618 1.4e-26 123.6 157 42.0
Atru.chr3.4044 Acer truncatum HOM05D003953 ORTHO05D004618 1.8e-26 123.2 159 40.9
ECA248G2580 Erigeron canadensis HOM05D003953 ORTHO05D004618 1.8e-26 123.2 147 44.9
HPP92_011695 Vanilla planifolia HOM05D003953 ORTHO05D004618 2.3e-26 122.9 152 42.8
Gohir.A06G083400 Gossypium hirsutum HOM05D003953 ORTHO05D004618 4.0e-26 122.1 149 44.3
Zm00001eb169140 Zea mays HOM05D003953 ORTHO05D004618 4.0e-26 122.1 160 40.0
HanXRQChr09g0262301 Helianthus annuus HOM05D003953 ORTHO05D004618 1.1e-25 120.6 147 45.6
Phvul.004G063100 Phaseolus vulgaris HOM05D003953 ORTHO05D004618 1.1e-25 120.6 151 42.4
arahy.Tifrunner.gnm1.ann1.6EI814 Arachis hypogaea HOM05D003953 ORTHO05D004618 1.5e-25 120.2 141 44.7
PGR102G1512 Punica granatum HOM05D003953 ORTHO05D004618 2.0e-25 119.8 147 43.5
Eucgr.G01038 Eucalyptus grandis HOM05D003953 ORTHO05D004618 2.6e-25 119.4 155 40.0
Sc12g0001080 Simmondsia chinensis HOM05D003953 ORTHO05D004618 2.6e-25 119.4 157 42.0
AagrBONN_evm.TU.Sc2ySwM_117.3970 Anthoceros agrestis HOM05D003953 ORTHO05D004618 3.3e-25 119.0 158 39.2
AUR62001716 Chenopodium quinoa HOM05D003953 ORTHO05D004618 4.4e-25 118.6 156 40.4
FvH4_6g26980 Fragaria vesca HOM05D003953 ORTHO05D004618 4.4e-25 118.6 59 94.9
Nitab4.5_0002142g0080 Nicotiana tabacum HOM05D003953 ORTHO05D004618 4.4e-25 118.6 158 39.9
AagrBONN_evm.TU.Sc2ySwM_368.2434 Anthoceros agrestis HOM05D003953 ORTHO05D004618 5.7e-25 118.2 158 39.9
Lsat_1_v5_gn_5_168181 Lactuca sativa HOM05D003953 ORTHO05D004618 5.7e-25 118.2 147 42.9
Ah.13g070310 Amaranthus hybridus HOM05D003953 ORTHO05D004618 7.5e-25 117.9 157 38.9
Pp3c3_11180 Physcomitrium patens HOM05D003953 ORTHO05D004618 9.7e-25 117.5 159 38.4
Dinv34318 Davidia involucrata HOM05D003953 ORTHO05D004618 1.3e-24 117.1 140 45.0
Aa31LG5G6920 Aethionema arabicum HOM05D003953 ORTHO05D004618 3.7e-24 115.5 159 40.3
AagrBONN_evm.TU.Sc2ySwM_295.3 Anthoceros agrestis HOM05D003953 ORTHO05D004618 3.7e-24 115.5 158 39.2
TPR.G3298 Trifolium pratense HOM05D003953 ORTHO05D004618 3.7e-24 115.5 210 35.2
AagrBONN_evm.TU.Sc2ySwM_287.2 Anthoceros agrestis HOM05D003953 ORTHO05D004618 4.8e-24 115.2 158 39.2
AagrBONN_evm.TU.Sc2ySwM_26.4 Anthoceros agrestis HOM05D003953 ORTHO05D004618 8.2e-24 114.4 159 38.4
Hund03162 Selenicereus undatus HOM05D003953 ORTHO05D004618 3.1e-23 112.5 157 40.1
Haze_19301 Corylus avellana HOM05D003953 ORTHO05D004618 4.1e-23 112.1 179 38.0
Cpa.g.sc112.95 Carica papaya HOM05D003953 ORTHO05D004618 3.5e-22 109.0 160 38.8
PSO384G4465 Papaver somniferum HOM05D003953 ORTHO05D004618 1.7e-21 106.7 158 40.5
Phvul.001G016450 Phaseolus vulgaris HOM05D003953 ORTHO05D004618 5.0e-21 105.1 60 76.7
AL4G24250 Arabidopsis lyrata HOM05D003953 ORTHO05D004618 1.1e-20 104.0 176 35.2
BcaB02g10260 Brassica carinata HOM05D003953 ORTHO05D004618 1.1e-20 104.0 148 38.5
C04p21300 Brassica napus HOM05D003953 ORTHO05D004618 1.5e-20 103.6 148 38.5
BolC4t23659H Brassica oleracea HOM05D003953 ORTHO05D004618 1.5e-20 103.6 148 38.5
PSO339G2392 Papaver somniferum HOM05D003953 ORTHO05D004618 1.5e-20 103.6 159 40.3
A05p15860 Brassica napus HOM05D003953 ORTHO05D004618 1.9e-20 103.2 151 37.1
Sp4g12270 Schrenkiella parvula HOM05D003953 ORTHO05D004618 2.5e-20 102.8 179 34.1
AT2G29540 Arabidopsis thaliana HOM05D003953 ORTHO05D004618 1.2e-19 100.5 147 37.4
Thhalv10017434m.g Eutrema salsugineum HOM05D003953 ORTHO05D004618 1.2e-19 100.5 175 34.9
Carub.0004s1059 Capsella rubella HOM05D003953 ORTHO05D004618 1.6e-19 100.1 158 35.4
Hund04903 Selenicereus undatus HOM05D003953 ORTHO05D004618 3.6e-19 99.0 148 37.2
Gorai.001G172100 Gossypium raimondii HOM05D003953 ORTHO05D004618 8.0e-19 97.8 60 73.3
Gohir.D02G136950 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.4e-18 97.1 83 57.8
Mapoly0064s0065 Marchantia polymorpha HOM05D003953 ORTHO05D004618 2.3e-18 96.3 150 35.3
TAR623G0256 Trochodendron aralioides HOM05D003953 ORTHO05D004618 3.0e-18 95.9 128 42.2
SMO228G0103 Selaginella moellendorffii HOM05D003953 ORTHO05D004618 2.6e-17 92.8 139 35.3
CARHR122880 Cardamine hirsuta HOM05D003953 ORTHO05D004618 2.8e-16 89.4 176 31.8
SMO351G0643 Selaginella moellendorffii HOM05D003953 ORTHO05D004618 8.3e-16 87.8 49 73.5
C04p58680 Brassica napus HOM05D003953 ORTHO05D004618 1.1e-15 87.4 148 35.1
Mapoly0079s0034 Marchantia polymorpha HOM05D003953 ORTHO05D004618 4.1e-15 85.5 150 32.7
VMungo1383G2014 Vigna mungo HOM05D004418 ORTHO05D005222 7.0e-15 84.7 132 37.9
MCO07G039 Micromonas commoda HOM05D003953 ORTHO05D004618 2.9e-13 79.3 149 32.2
EL10Ac7g16096 Beta vulgaris HOM05D003953 ORTHO05D004618 5.0e-13 78.6 123 36.6
CAN.G696.7 Capsicum annuum HOM05D003953 ORTHO05D004618 5.0e-13 78.6 48 68.8
QL01p028911 Quercus lobata HOM05D003953 ORTHO05D004618 5.0e-13 78.6 218 29.8
Cre12.g484100 Chlamydomonas reinhardtii HOM05D003953 ORTHO05D004618 1.1e-12 77.4 57 56.1
AUR62020054 Chenopodium quinoa HOM05D003953 ORTHO05D004618 4.2e-12 75.5 122 35.2
Os11g0218100 Oryza sativa ssp. japonica HOM05D003953 ORTHO05D004618 1.0e-10 70.9 117 36.8
Peaxi162Scf00025g01315 Petunia axillaris HOM05D003953 ORTHO05D004618 3.0e-10 69.3 158 29.7
Eucgr.G01035 Eucalyptus grandis HOM05D003953 ORTHO05D004618 3.4e-09 65.9 119 32.8
Actinidia25120 Actinidia chinensis HOM05D003953 ORTHO05D004618 7.5e-09 64.7 58 58.6
PRCOL_00001819 Prasinoderma coloniale HOM05D003953 ORTHO05D004618 1.3e-08 63.9 48 52.1
Aqoxy1G00773 Aquilegia oxysepala HOM05D003953 ORTHO05D004618 1.4e-07 60.5 36 72.2
A04p22530 Brassica napus HOM05D003953 ORTHO05D004618 4.1e-07 58.9 141 29.1
BraA04t17798Z Brassica rapa HOM05D003953 ORTHO05D004618 4.1e-07 58.9 141 29.1
MCO15G160 Micromonas commoda HOM05D003916 ORTHO05D004655 9.2e-07 57.8 46 47.8
AagrBONN_evm.TU.Sc2ySwM_368.1582 Anthoceros agrestis HOM05D003916 ORTHO05D004655 3.5e-06 55.8 48 43.8
SEGI_19516 Sequoiadendron giganteum HOM05D003916 ORTHO05D004655 4.5e-06 55.5 48 43.8
Mapoly0064s0055 Marchantia polymorpha HOM05D003916 ORTHO05D004655 7.7e-06 54.7 48 47.9
Pp3c2_2740 Physcomitrium patens HOM05D003916 ORTHO05D004655 7.7e-06 54.7 48 47.9
SEGI_28477 Sequoiadendron giganteum HOM05D003916 ORTHO05D004655 7.7e-06 54.7 48 47.9


User provided reference genes

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