Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G2251 Fragaria x ananassa HOM05D004377 ORTHO05D005168 7.1e-273 943.3 483 100.0
FAN18G3774 Fragaria x ananassa HOM05D004377 ORTHO05D005168 4.6e-147 525.4 277 96.8
RcHm_v2.0_Chr7g0203831 Rosa chinensis HOM05D004377 ORTHO05D005168 2.5e-145 519.6 277 95.3
FAN13G0320 Fragaria x ananassa HOM05D004377 ORTHO05D005168 4.3e-145 518.8 277 95.3
FAN04G2360 Fragaria x ananassa HOM05D004377 ORTHO05D005168 7.4e-145 518.1 277 95.7
Cfa012684 Carpinus fangiana HOM05D004377 ORTHO05D005168 5.3e-135 485.3 277 87.7
Prupe.5G065700 Prunus persica HOM05D004377 ORTHO05D005168 5.0e-133 478.8 277 85.9
Manes.02G041200 Manihot esculenta HOM05D004377 ORTHO05D005168 3.2e-132 476.1 277 85.2
MD06G1053000 Malus domestica HOM05D004377 ORTHO05D005168 1.6e-131 473.8 277 85.6
Duzib205G1290 Durio zibethinus HOM05D004377 ORTHO05D005168 2.7e-131 473.0 277 83.8
CiPaw.12G050900 Carya illinoinensis HOM05D004377 ORTHO05D005168 7.9e-131 471.5 277 84.5
Ciclev10021569m.g Citrus clementina HOM05D004377 ORTHO05D005168 7.9e-131 471.5 277 83.0
Thecc.03G248500 Theobroma cacao HOM05D004377 ORTHO05D005168 1.0e-130 471.1 277 83.0
Atru.chr9.1283 Acer truncatum HOM05D004377 ORTHO05D005168 2.3e-130 469.9 275 83.6
COL.COLO4_37134 Corchorus olitorius HOM05D004377 ORTHO05D005168 2.3e-130 469.9 277 83.0
Gohir.D12G218200 Gossypium hirsutum HOM05D004377 ORTHO05D005168 2.3e-130 469.9 277 81.9
Gorai.008G233800 Gossypium raimondii HOM05D004377 ORTHO05D005168 2.3e-130 469.9 277 81.9
CSS0001039 Camellia sinensis var. sinensis HOM05D004377 ORTHO05D005168 6.7e-130 468.4 277 81.9
MD04G1059900 Malus domestica HOM05D004377 ORTHO05D005168 8.8e-130 468.0 277 84.1
Dinv39164 Davidia involucrata HOM05D004377 ORTHO05D005168 1.1e-129 467.6 275 81.5
Gohir.A12G215600 Gossypium hirsutum HOM05D004377 ORTHO05D005168 1.5e-129 467.2 277 80.9
Dinv21652 Davidia involucrata HOM05D004377 ORTHO05D005168 2.5e-129 466.5 277 80.9
Hma1.2p1_0316F.1_g122900 Hydrangea macrophylla HOM05D004377 ORTHO05D005168 2.5e-129 466.5 277 81.9
PGR031G0408 Punica granatum HOM05D004377 ORTHO05D005168 2.5e-129 466.5 277 81.9
CANSAT21G0788 Cannabis sativa HOM05D004377 ORTHO05D005168 3.3e-129 466.1 277 84.5
CsaV3_5G004410 Cucumis sativus L. HOM05D004377 ORTHO05D005168 3.7e-128 462.6 277 79.8
MELO3C005517.2 Cucumis melo HOM05D004377 ORTHO05D005168 8.2e-128 461.5 277 79.4
Eucgr.D02097 Eucalyptus grandis HOM05D004377 ORTHO05D005168 8.2e-128 461.5 277 81.2
Potri.001G155900 Populus trichocarpa HOM05D004377 ORTHO05D005168 1.1e-127 461.1 277 83.0
Phvul.003G222200 Phaseolus vulgaris HOM05D004377 ORTHO05D005168 2.4e-127 459.9 277 81.2
arahy.Tifrunner.gnm1.ann1.XFA1VC Arachis hypogaea HOM05D004377 ORTHO05D005168 3.1e-127 459.5 276 81.2
Glyma.05G061700 Glycine max HOM05D004377 ORTHO05D005168 4.1e-127 459.1 277 80.9
VMungo0251G2239 Vigna mungo HOM05D004377 ORTHO05D005168 9.1e-127 458.0 273 81.7
Glyma.17G143400 Glycine max HOM05D004377 ORTHO05D005168 1.5e-126 457.2 277 81.2
TWI81G0568 Tripterygium wilfordii HOM05D004377 ORTHO05D005168 2.0e-126 456.8 277 80.5
GSVIVG01006273001 Vitis vinifera HOM05D004377 ORTHO05D005168 2.6e-126 456.4 266 84.6
Sed0026125 Sechium edule HOM05D004377 ORTHO05D005168 1.0e-125 454.5 277 79.8
ClCG01G004220 Citrullus lanatus HOM05D004377 ORTHO05D005168 1.7e-125 453.8 288 76.7
Psat4g072760 Pisum sativum HOM05D004377 ORTHO05D005168 2.9e-125 453.0 277 79.8
Haze_07947 Corylus avellana HOM05D004377 ORTHO05D005168 3.8e-125 452.6 285 81.8
Lj4g0001332 Lotus japonicus HOM05D004377 ORTHO05D005168 5.0e-125 452.2 277 78.7
CAN.G1227.21 Capsicum annuum HOM05D004377 ORTHO05D005168 8.5e-125 451.4 277 77.6
Peaxi162Scf00102g00106 Petunia axillaris HOM05D004377 ORTHO05D005168 1.4e-124 450.7 277 78.3
Potri.003G078900 Populus trichocarpa HOM05D004377 ORTHO05D005168 1.4e-124 450.7 277 80.9
Solyc08g007320.3 Solanum lycopersicum HOM05D004377 ORTHO05D005168 2.5e-124 449.9 277 77.6
Actinidia02148 Actinidia chinensis HOM05D004377 ORTHO05D005168 4.2e-124 449.1 277 78.3
Medtr4g100740 Medicago truncatula HOM05D004377 ORTHO05D005168 7.2e-124 448.4 277 79.8
TPR.G37661 Trifolium pratense HOM05D004377 ORTHO05D005168 1.2e-123 447.6 277 79.1
Lalb_Chr16g0386801 Lupinus albus HOM05D004377 ORTHO05D005168 1.6e-123 447.2 277 78.3
Sed0028099 Sechium edule HOM05D004377 ORTHO05D005168 2.7e-123 446.4 277 78.3
Migut.A01127 Erythranthe guttata HOM05D004377 ORTHO05D005168 3.6e-123 446.0 277 77.6
Ca_21977_v3 Cicer arietinum L. HOM05D004377 ORTHO05D005168 6.1e-123 445.3 277 78.7
Gohir.A11G027200 Gossypium hirsutum HOM05D004377 ORTHO05D005168 7.9e-123 444.9 274 79.2
Sabra03G0049000 Salix brachista HOM05D004377 ORTHO05D005168 7.9e-123 444.9 266 83.5
Cc08_g12200 Coffea canephora HOM05D004377 ORTHO05D005168 1.0e-122 444.5 277 75.5
Lalb_Chr05g0221171 Lupinus albus HOM05D004377 ORTHO05D005168 1.0e-122 444.5 277 78.3
Sabra01G0125600 Salix brachista HOM05D004377 ORTHO05D005168 1.4e-122 444.1 294 77.9
Actinidia10840 Actinidia chinensis HOM05D004377 ORTHO05D005168 2.3e-122 443.4 269 80.3
MSTRG.12119 Avicennia marina HOM05D004377 ORTHO05D005168 3.0e-122 443.0 277 76.5
Lj8A268T28 Lonicera japonica HOM05D004377 ORTHO05D005168 1.1e-121 441.0 266 80.1
DCAR_006841 Daucus carota HOM05D004377 ORTHO05D005168 2.0e-121 440.3 266 80.1
CSS0042619 Camellia sinensis var. sinensis HOM05D004377 ORTHO05D005168 4.4e-121 439.1 264 79.2
ECA240G2341 Erigeron canadensis HOM05D004377 ORTHO05D005168 9.7e-121 438.0 277 77.6
Lj4g0011374 Lotus japonicus HOM05D004377 ORTHO05D005168 9.7e-121 438.0 277 77.6
DCAR_008505 Daucus carota HOM05D004377 ORTHO05D005168 1.7e-120 437.2 277 76.9
HanXRQChr03g0088831 Helianthus annuus HOM05D004377 ORTHO05D005168 1.7e-120 437.2 277 77.6
Lsat_1_v5_gn_6_92481 Lactuca sativa HOM05D004377 ORTHO05D005168 3.7e-120 436.0 277 77.3
THA.LOC104798366 Tarenaya hassleriana HOM05D004377 ORTHO05D005168 1.4e-119 434.1 278 78.4
vmacro00002 Vaccinium macrocarpon HOM05D004377 ORTHO05D005168 2.4e-119 433.3 267 78.7
Nn4g26339 Nelumbo nucifera HOM05D004377 ORTHO05D005168 3.1e-119 433.0 277 76.2
Nitab4.5_0000712g0120 Nicotiana tabacum HOM05D004377 ORTHO05D005168 3.1e-119 433.0 275 76.7
Sc07g0009230 Simmondsia chinensis HOM05D004377 ORTHO05D005168 3.1e-119 433.0 266 78.2
Nn1g02340 Nelumbo nucifera HOM05D004377 ORTHO05D005168 4.1e-119 432.6 277 76.2
arahy.Tifrunner.gnm1.ann1.E2A47G Arachis hypogaea HOM05D004377 ORTHO05D005168 7.0e-119 431.8 336 67.0
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 9.1e-119 431.4 354 64.7
AUR62007109 Chenopodium quinoa HOM05D004377 ORTHO05D005168 9.1e-119 431.4 278 76.6
TAR375G0521 Trochodendron aralioides HOM05D004377 ORTHO05D005168 9.1e-119 431.4 281 76.2
RcHm_v2.0_Chr7g0203871 Rosa chinensis HOM05D004377 ORTHO05D005168 1.2e-118 431.0 277 83.0
vmacro14068 Vaccinium macrocarpon HOM05D004377 ORTHO05D005168 1.5e-118 430.6 267 79.8
Aqoxy5G00459 Aquilegia oxysepala HOM05D004377 ORTHO05D005168 2.0e-118 430.3 277 75.1
arahy.Tifrunner.gnm1.ann1.ID9RWP Arachis hypogaea HOM05D004377 ORTHO05D005168 2.6e-118 429.9 277 77.6
Nitab4.5_0002225g0040 Nicotiana tabacum HOM05D004377 ORTHO05D005168 5.9e-118 428.7 283 74.6
Sp2g12120 Schrenkiella parvula HOM05D004377 ORTHO05D005168 5.9e-118 428.7 278 77.3
Rhsim07G0110500 Rhododendron simsii HOM05D004377 ORTHO05D005168 7.7e-118 428.3 285 75.1
Thhalv10000986m.g Eutrema salsugineum HOM05D004377 ORTHO05D005168 6.5e-117 425.2 278 76.3
CARHR173960 Cardamine hirsuta HOM05D004377 ORTHO05D005168 8.5e-117 424.9 278 76.3
Ah.12g054290 Amaranthus hybridus HOM05D004377 ORTHO05D005168 1.1e-116 424.5 273 75.1
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 2.5e-116 423.3 353 67.1
Cpa.g.sc29.192 Carica papaya HOM05D004377 ORTHO05D005168 2.5e-116 423.3 239 85.8
HanXRQChr17g0549351 Helianthus annuus HOM05D004377 ORTHO05D005168 4.2e-116 422.5 277 74.7
AL8G10630 Arabidopsis lyrata HOM05D004377 ORTHO05D005168 1.6e-115 420.6 278 76.6
PSO832G1836 Papaver somniferum HOM05D004377 ORTHO05D005168 1.6e-115 420.6 277 73.3
Carub.0008s0037 Capsella rubella HOM05D004377 ORTHO05D005168 2.1e-115 420.2 278 76.6
AT5G47420 Arabidopsis thaliana HOM05D004377 ORTHO05D005168 2.7e-115 419.9 278 77.0
BraA02t08132Z Brassica rapa HOM05D004377 ORTHO05D005168 2.7e-115 419.9 276 75.7
CARHR224020 Cardamine hirsuta HOM05D004377 ORTHO05D005168 3.6e-115 419.5 281 76.2
AT4G17420 Arabidopsis thaliana HOM05D004377 ORTHO05D005168 8.0e-115 418.3 281 76.2
PSO210G5659 Papaver somniferum HOM05D004377 ORTHO05D005168 1.8e-114 417.2 277 72.6
AL7G37300 Arabidopsis lyrata HOM05D004377 ORTHO05D005168 2.3e-114 416.8 281 75.8
Carub.0007s2400 Capsella rubella HOM05D004377 ORTHO05D005168 2.3e-114 416.8 281 75.8
Lalb_Chr04g0253671 Lupinus albus HOM05D004377 ORTHO05D005168 1.1e-113 414.5 277 75.5
Thhalv10025916m.g Eutrema salsugineum HOM05D004377 ORTHO05D005168 5.7e-113 412.1 281 75.1
Sp7g16770 Schrenkiella parvula HOM05D004377 ORTHO05D005168 1.3e-112 411.0 281 74.7
Gohir.D11G026400 Gossypium hirsutum HOM05D004377 ORTHO05D005168 1.7e-112 410.6 274 75.2
A01p19930 Brassica napus HOM05D004377 ORTHO05D005168 2.2e-112 410.2 281 75.4
A01p19950 Brassica napus HOM05D004377 ORTHO05D005168 4.8e-112 409.1 281 75.4
BraA01t01921Z Brassica rapa HOM05D004377 ORTHO05D005168 4.8e-112 409.1 281 75.1
BcaNung00095 Brassica carinata HOM05D004377 ORTHO05D005168 8.2e-112 408.3 281 74.7
ATR0697G021 Amborella trichopoda HOM05D004377 ORTHO05D005168 1.1e-111 407.9 277 71.1
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 1.1e-111 407.9 353 65.4
BcaC09g50474 Brassica carinata HOM05D004377 ORTHO05D005168 1.4e-111 407.5 281 75.1
Duzib068G0502 Durio zibethinus HOM05D004377 ORTHO05D005168 9.1e-111 404.8 277 75.1
C01p25030 Brassica napus HOM05D004377 ORTHO05D005168 2.0e-110 403.7 281 74.4
SGA_v2.0_scaffold199G41183 Striga asiatica HOM05D004377 ORTHO05D005168 2.0e-110 403.7 308 66.6
BolC2t10957H Brassica oleracea HOM05D004377 ORTHO05D005168 4.5e-110 402.5 276 73.6
A02p31280 Brassica napus HOM05D004377 ORTHO05D005168 5.0e-109 399.1 320 65.0
FvH4_5g19370 Fragaria vesca HOM05D004377 ORTHO05D005168 1.5e-108 397.5 208 95.7
BolC1t02447H Brassica oleracea HOM05D004377 ORTHO05D005168 7.2e-108 395.2 271 74.5
AUR62019971 Chenopodium quinoa HOM05D004377 ORTHO05D005168 7.2e-108 395.2 278 70.9
CDE02G4267 Ceratophyllum demersum HOM05D004377 ORTHO05D005168 2.1e-107 393.7 281 68.0
TAR629G1293 Trochodendron aralioides HOM05D004377 ORTHO05D005168 2.3e-106 390.2 277 70.8
Sopen08g003260 Solanum pennellii HOM05D004377 ORTHO05D005168 2.6e-105 386.7 231 80.1
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 3.3e-105 386.3 357 63.0
HPP92_007932 Vanilla planifolia HOM05D004377 ORTHO05D005168 1.7e-104 384.0 277 66.4
HPP92_007952 Vanilla planifolia HOM05D004377 ORTHO05D005168 1.7e-104 384.0 277 66.4
BcaC03g16958 Brassica carinata HOM05D004377 ORTHO05D005168 1.1e-103 381.3 277 71.8
C02p48650 Brassica napus HOM05D004377 ORTHO05D005168 1.1e-103 381.3 277 71.8
CDE05G2427 Ceratophyllum demersum HOM05D004377 ORTHO05D005168 5.3e-103 379.0 281 66.2
unitig_736.g22277 Utricularia gibba HOM05D004377 ORTHO05D005168 7.0e-103 378.6 242 75.2
RcHm_v2.0_Chr2g0120481 Rosa chinensis HOM05D004377 ORTHO05D005168 1.2e-102 377.9 218 87.2
BcaC06g34254 Brassica carinata HOM05D003894 ORTHO05D004584 2.2e-101 373.6 245 76.7
SEGI_38141 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 3.8e-101 372.9 273 67.8
Gorai.007G028700 Gossypium raimondii HOM05D004377 ORTHO05D005168 9.4e-100 368.2 266 72.2
Lsat_1_v5_gn_3_1221 Lactuca sativa HOM05D004377 ORTHO05D005168 1.2e-99 367.9 282 66.7
MBI09_g26154_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 1.6e-99 367.5 301 61.8
EL10Ac5g12360 Beta vulgaris HOM05D004377 ORTHO05D005168 1.2e-94 351.3 278 65.8
arahy.Tifrunner.gnm1.ann1.CS1SDE Arachis hypogaea HOM05D004377 ORTHO05D005168 2.0e-94 350.5 336 58.6
MBI08_g41738_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 2.3e-93 347.1 261 64.8
Os03g0747300 Oryza sativa ssp. japonica HOM05D004377 ORTHO05D005168 3.8e-93 346.3 278 60.4
SHI09598 Sapria himalayana HOM05D004377 ORTHO05D005168 1.1e-92 344.7 266 64.3
Actinidia14411 Actinidia chinensis HOM05D004377 ORTHO05D005168 1.5e-92 344.4 253 70.4
BcaC06g34256 Brassica carinata HOM05D004377 ORTHO05D005168 2.1e-91 340.5 249 73.1
SGA_v2.0_scaffold199G41214 Striga asiatica HOM05D004377 ORTHO05D005168 1.8e-90 337.4 208 76.4
Nitab4.5_0000618g0130 Nicotiana tabacum HOM05D004377 ORTHO05D005168 7.5e-89 332.0 274 61.7
BcaC06g31391 Brassica carinata HOM05D004377 ORTHO05D005168 9.2e-79 298.5 245 66.5
Oeu027011.1 Olea europaea HOM05D004377 ORTHO05D005168 9.2e-79 298.5 239 64.4
SMO356G0134 Selaginella moellendorffii HOM05D004377 ORTHO05D005168 5.8e-73 279.3 276 54.3
FAN15G2264 Fragaria x ananassa HOM05D004377 ORTHO05D005168 1.1e-66 258.5 282 58.9
FAN27G2545 Fragaria x ananassa HOM05D004377 ORTHO05D005168 8.9e-66 255.4 328 52.1
Zm00001eb057110 Zea mays HOM05D004377 ORTHO05D005168 1.2e-65 255.0 208 57.2
Actinidia31514 Actinidia chinensis HOM05D004377 ORTHO05D005168 6.2e-51 206.1 211 59.2
Oeu012199.1 Olea europaea HOM05D004377 ORTHO05D005168 1.4e-50 204.9 120 76.7
Aa31LG6G160 Aethionema arabicum HOM05D004377 ORTHO05D005168 2.6e-49 200.7 268 47.0
AagrBONN_evm.TU.Sc2ySwM_362.367 Anthoceros agrestis HOM05D004377 ORTHO05D005168 9.3e-47 192.2 165 55.8
Mapoly0006s0223 Marchantia polymorpha HOM05D004377 ORTHO05D005168 9.3e-47 192.2 164 57.9
Hund14575 Selenicereus undatus HOM05D004377 ORTHO05D005168 1.1e-44 185.3 167 58.1
TAR374G0316 Trochodendron aralioides HOM05D004377 ORTHO05D005168 2.4e-42 177.6 122 70.5
FAN24G1967 Fragaria x ananassa HOM05D004377 ORTHO05D005168 3.2e-39 167.2 301 43.9
MBI09_g24445_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 5.3e-34 149.8 166 48.8
FvH4_2g20120 Fragaria vesca HOM05D004377 ORTHO05D005168 4.5e-33 146.7 275 43.3
GSVIVG01015047001 Vitis vinifera HOM05D004377 ORTHO05D005168 2.5e-28 131.0 83 68.7
MCO15G334 Micromonas commoda HOM05D004377 ORTHO05D005168 1.8e-26 124.8 220 34.1
SEGI_12924 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 2.2e-24 117.9 120 50.8
MBI09_g42042_MAGBIO Magnolia biondii HOM05D004377 ORTHO05D005168 5.0e-24 116.7 175 45.1
Nitab4.5_0002372g0030 Nicotiana tabacum HOM05D004377 ORTHO05D005168 2.3e-21 107.8 66 81.8
SEGI_18353 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 2.3e-21 107.8 94 58.5
Nitab4.5_0001410g0090 Nicotiana tabacum HOM05D004152 ORTHO05D004878 8.7e-21 105.9 118 50.8
Nitab4.5_0002881g0130 Nicotiana tabacum HOM05D004152 ORTHO05D004878 7.4e-12 76.3 47 78.7
SEGI_16571 Sequoiadendron giganteum HOM05D004377 ORTHO05D005168 2.5e-07 61.2 49 65.3
Actinidia31513 Actinidia chinensis HOM05D004377 ORTHO05D005168 2.7e-06 57.8 37 75.7


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