Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G2016 Fragaria x ananassa HOM05D007699 ORTHO05D009796 5.6e-49 197.2 94 100.0
FvH4_3g13700 Fragaria vesca HOM05D007699 ORTHO05D009796 1.3e-24 116.3 71 83.1
FAN11G3494 Fragaria x ananassa HOM05D007699 ORTHO05D009796 4.8e-24 114.4 71 81.7
FAN13G3199 Fragaria x ananassa HOM05D007699 ORTHO05D009796 7.1e-20 100.5 56 82.1
FAN11G1327 Fragaria x ananassa HOM05D007699 ORTHO05D009796 4.6e-19 97.8 57 82.5
Prupe.7G069600 Prunus persica HOM05D007699 ORTHO05D009796 1.5e-17 92.8 68 69.1
Nitab4.5_0005352g0040 Nicotiana tabacum HOM05D007699 ORTHO05D009796 8.2e-16 87.0 64 68.8
Phvul.008G062500 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 2.4e-15 85.5 62 69.4
FAN18G1300 Fragaria x ananassa HOM05D005738 ORTHO05D007135 6.9e-15 84.0 48 83.3
FAN18G3749 Fragaria x ananassa HOM05D005738 ORTHO05D007135 6.9e-15 84.0 48 83.3
Potri.011G103301 Populus trichocarpa HOM05D007699 ORTHO05D009796 6.9e-15 84.0 40 95.0
C03p91420 Brassica napus HOM05D007699 ORTHO05D009796 9.0e-15 83.6 62 69.4
Migut.J00839 Erythranthe guttata HOM05D007699 ORTHO05D009796 1.2e-14 83.2 38 97.4
Mapoly0020s0143 Marchantia polymorpha HOM05D007699 ORTHO05D009796 1.2e-14 83.2 40 92.5
Medtr3g084270 Medicago truncatula HOM05D007699 ORTHO05D009796 1.2e-14 83.2 42 88.1
Medtr3g105890 Medicago truncatula HOM05D007699 ORTHO05D009796 1.2e-14 83.2 40 95.0
arahy.Tifrunner.gnm1.ann1.3C01L3 Arachis hypogaea HOM05D007699 ORTHO05D009796 2.0e-14 82.4 36 100.0
Mapoly0086s0020 Marchantia polymorpha HOM05D007699 ORTHO05D009796 2.0e-14 82.4 36 100.0
Phvul.001G066700 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 2.0e-14 82.4 51 74.5
QL03p053410 Quercus lobata HOM05D007699 ORTHO05D009796 2.0e-14 82.4 46 80.4
TPR.G12299 Trifolium pratense HOM05D007699 ORTHO05D009796 2.0e-14 82.4 43 88.4
arahy.Tifrunner.gnm1.ann1.3J1SD9 Arachis hypogaea HOM05D007699 ORTHO05D009796 2.6e-14 82.0 55 67.3
Prupe.7G080000 Prunus persica HOM05D007699 ORTHO05D009796 2.6e-14 82.0 39 94.9
A05p18230 Brassica napus HOM05D007699 ORTHO05D009796 3.4e-14 81.6 45 80.0
Carub.0003s1340 Capsella rubella HOM05D007699 ORTHO05D009796 3.4e-14 81.6 40 90.0
Phvul.001G084100 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 3.4e-14 81.6 41 90.2
TPR.G38695 Trifolium pratense HOM05D000020 ORTHO05D000543 5.9e-14 80.9 38 94.7
CARHR088640 Cardamine hirsuta HOM05D007699 ORTHO05D009796 7.7e-14 80.5 37 94.6
Gohir.D06G068332 Gossypium hirsutum HOM05D007699 ORTHO05D009796 7.7e-14 80.5 40 90.0
EL10Ac6g13349 Beta vulgaris HOM05D007699 ORTHO05D009796 1.0e-13 80.1 49 81.6
Manes.11G145650 Manihot esculenta HOM05D007699 ORTHO05D009796 1.0e-13 80.1 38 94.7
Potri.011G103401 Populus trichocarpa HOM05D007699 ORTHO05D009796 1.0e-13 80.1 38 94.7
EL10Ac6g13684 Beta vulgaris HOM05D007699 ORTHO05D009796 1.3e-13 79.7 67 55.2
CARHR185520 Cardamine hirsuta HOM05D007699 ORTHO05D009796 1.3e-13 79.7 35 100.0
Hma1.2p1_0886F.1_g232660 Hydrangea macrophylla HOM05D007699 ORTHO05D009796 1.3e-13 79.7 35 100.0
Hma1.2p1_0886F.1_g232685 Hydrangea macrophylla HOM05D007699 ORTHO05D009796 1.3e-13 79.7 35 100.0
Phvul.001G066900 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 1.3e-13 79.7 35 100.0
Sopen12g028800 Solanum pennellii HOM05D007699 ORTHO05D009796 1.3e-13 79.7 35 100.0
Ciclev10018283m.g Citrus clementina HOM05D007699 ORTHO05D009796 1.7e-13 79.3 46 80.4
Ah.10g036850 Amaranthus hybridus HOM05D007699 ORTHO05D009796 2.9e-13 78.6 41 87.8
EL10Ac6g13683 Beta vulgaris HOM05D007699 ORTHO05D009796 3.8e-13 78.2 39 89.7
FAN08G0324 Fragaria x ananassa HOM05D007699 ORTHO05D009796 5.0e-13 77.8 34 100.0
TPR.G32688 Trifolium pratense HOM05D007699 ORTHO05D009796 6.5e-13 77.4 49 75.5
EL10Ac6g13624 Beta vulgaris HOM05D007699 ORTHO05D009796 8.5e-13 77.0 38 92.1
Nn7g36904 Nelumbo nucifera HOM05D007699 ORTHO05D009796 8.5e-13 77.0 36 94.4
Medtr3g108610 Medicago truncatula HOM05D007699 ORTHO05D009796 1.1e-12 76.6 52 71.2
Solyc12g056290.2 Solanum lycopersicum HOM05D007699 ORTHO05D009796 1.1e-12 76.6 35 97.1
EL10Ac6g13685 Beta vulgaris HOM05D007699 ORTHO05D009796 1.4e-12 76.3 36 94.4
Phvul.009G076400 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 1.4e-12 76.3 52 69.2
Pp3c15_10810 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.4e-12 76.3 40 87.5
Pp3c15_10813 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.4e-12 76.3 40 87.5
Pp3c15_10820 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.4e-12 76.3 40 87.5
GSVIVG01037330001 Vitis vinifera HOM05D007699 ORTHO05D009796 1.4e-12 76.3 50 74.0
EL10Ac6g13623 Beta vulgaris HOM05D007699 ORTHO05D009796 1.9e-12 75.9 34 97.1
Pp3s677_20 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.9e-12 75.9 48 77.1
Glyma.19G099100 Glycine max HOM05D007699 ORTHO05D009796 3.2e-12 75.1 52 69.2
Gorai.010G079800 Gossypium raimondii HOM05D007699 ORTHO05D009796 4.2e-12 74.7 40 85.0
Gorai.011G262200 Gossypium raimondii HOM05D007699 ORTHO05D009796 4.2e-12 74.7 57 64.9
CSS0023756 Camellia sinensis var. sinensis HOM05D007699 ORTHO05D009796 7.2e-12 73.9 41 82.9
Pp3c1_6540 Physcomitrium patens HOM05D007699 ORTHO05D009796 9.4e-12 73.6 35 94.3
Pp3c10_15080 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.6e-11 72.8 45 77.8
Pp3c10_15084 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.6e-11 72.8 45 77.8
Pp3s1006_30 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.6e-11 72.8 45 77.8
Pp3s638_22 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.6e-11 72.8 45 77.8
Pp3s677_10 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.6e-11 72.8 45 77.8
Pp3s677_11 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.6e-11 72.8 45 77.8
Thecc.10G037500 Theobroma cacao HOM05D007699 ORTHO05D009796 1.6e-11 72.8 36 91.7
Pp3c21_2000 Physcomitrium patens HOM05D007699 ORTHO05D009796 2.1e-11 72.4 41 80.5
Pp3c21_2022 Physcomitrium patens HOM05D007699 ORTHO05D009796 2.1e-11 72.4 41 80.5
Potri.005G055667 Populus trichocarpa HOM05D007699 ORTHO05D009796 3.6e-11 71.6 34 94.1
CSS0021910 Camellia sinensis var. sinensis HOM05D007699 ORTHO05D009796 6.1e-11 70.9 39 84.6
Phvul.001G090500 Phaseolus vulgaris HOM05D007699 ORTHO05D009796 6.1e-11 70.9 40 87.5
FAN11G3758 Fragaria x ananassa HOM05D007699 ORTHO05D009796 7.9e-11 70.5 35 91.4
Medtr8g461450 Medicago truncatula HOM05D007699 ORTHO05D009796 7.9e-11 70.5 31 100.0
Potri.005G055534 Populus trichocarpa HOM05D007699 ORTHO05D009796 7.9e-11 70.5 31 100.0
PGSC0003DMG400029597 Solanum tuberosum HOM05D000312 ORTHO05D000221 1.0e-10 70.1 32 96.9
Gorai.011G262800 Gossypium raimondii HOM05D007699 ORTHO05D009796 1.4e-10 69.7 32 96.9
Pp3c24_6960 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.4e-10 69.7 34 91.2
Pp3c24_6961 Physcomitrium patens HOM05D007699 ORTHO05D009796 1.4e-10 69.7 34 91.2
SHI29091 Sapria himalayana HOM05D007699 ORTHO05D009796 1.8e-10 69.3 33 93.9
Pp3c1_26810 Physcomitrium patens HOM05D007699 ORTHO05D009796 3.0e-10 68.6 42 78.6
Carub.0006s3371 Capsella rubella HOM05D007699 ORTHO05D009796 5.1e-10 67.8 30 100.0
FAN18G1871 Fragaria x ananassa HOM05D007699 ORTHO05D009796 5.1e-10 67.8 30 100.0
Gohir.A11G277350 Gossypium hirsutum HOM05D007699 ORTHO05D009796 5.1e-10 67.8 30 100.0
Pp3c1_26830 Physcomitrium patens HOM05D007699 ORTHO05D009796 5.1e-10 67.8 31 96.8
arahy.Tifrunner.gnm1.ann1.C3EWW9 Arachis hypogaea HOM05D007699 ORTHO05D009796 2.5e-09 65.5 30 96.7
EL10Ac6g13625 Beta vulgaris HOM05D007699 ORTHO05D009796 2.5e-09 65.5 33 90.9
Medtr2g101670 Medicago truncatula HOM05D007699 ORTHO05D009796 5.7e-09 64.3 51 62.7
EL10Ac6g13621 Beta vulgaris HOM05D007699 ORTHO05D009796 2.8e-08 62.0 34 82.4
Pp3c24_16090 Physcomitrium patens HOM05D007699 ORTHO05D009796 2.8e-08 62.0 46 65.2
Pp3c24_16091 Physcomitrium patens HOM05D007699 ORTHO05D009796 2.8e-08 62.0 46 65.2
Medtr6g070990 Medicago truncatula HOM05D007699 ORTHO05D009796 1.8e-07 59.3 43 69.8
AT2G15530 Arabidopsis thaliana HOM05D000187 ORTHO05D000230 6.9e-07 57.4 77 44.2
SHI28974 Sapria himalayana HOM05D007699 ORTHO05D009796 2.0e-06 55.8 31 80.6
Pp3c27_1930 Physcomitrium patens HOM05D007699 ORTHO05D009796 3.4e-06 55.1 32 75.0


User provided reference genes

Program Settings