Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN08G1472 Fragaria x ananassa HOM05D000257 ORTHO05D045605 9.7e-118 426.8 209 100.0
FAN13G3084 Fragaria x ananassa HOM05D000257 ORTHO05D003333 7.0e-92 340.9 207 84.5
FvH4_5g37100 Fragaria vesca HOM05D000257 ORTHO05D045605 2.8e-56 222.6 190 66.8
FAN24G2796 Fragaria x ananassa HOM05D000257 ORTHO05D003333 2.1e-40 169.9 175 59.4
FvH4_2g09730 Fragaria vesca HOM05D000257 ORTHO05D003333 1.3e-32 144.1 153 57.5
FAN24G2690 Fragaria x ananassa HOM05D000257 ORTHO05D003333 1.3e-32 144.1 153 57.5
FAN15G1513 Fragaria x ananassa HOM05D000257 ORTHO05D003333 8.1e-32 141.4 153 56.9
FAN20G0241 Fragaria x ananassa HOM05D000257 ORTHO05D003333 1.4e-31 140.6 152 57.2
RcHm_v2.0_Chr7g0238641 Rosa chinensis HOM05D000257 ORTHO05D003333 2.4e-31 139.8 153 56.2
Prupe.1G518700 Prunus persica HOM05D000257 ORTHO05D003333 9.0e-31 137.9 139 57.6
CiPaw.08G046000 Carya illinoinensis HOM05D000257 ORTHO05D003333 1.7e-29 133.7 135 57.0
CANSAT35G1064 Cannabis sativa HOM05D000257 ORTHO05D003333 1.1e-28 131.0 135 56.3
Aa31LG9G14640 Aethionema arabicum HOM05D000257 ORTHO05D003333 1.4e-28 130.6 135 55.6
Lj1g0017270 Lotus japonicus HOM05D000257 ORTHO05D003333 1.9e-28 130.2 135 56.3
vmacro21262 Vaccinium macrocarpon HOM05D000257 ORTHO05D003333 1.9e-28 130.2 135 54.8
MD08G1184600 Malus domestica HOM05D000257 ORTHO05D003333 3.2e-28 129.4 135 57.0
MD00G1009900 Malus domestica HOM05D000257 ORTHO05D003333 4.2e-28 129.0 139 56.1
Psat5g139680 Pisum sativum HOM05D000257 ORTHO05D003333 4.2e-28 129.0 140 54.3
QL12p037006 Quercus lobata HOM05D000257 ORTHO05D003333 4.2e-28 129.0 136 55.9
CSS0038406 Camellia sinensis var. sinensis HOM05D000257 ORTHO05D003333 7.1e-28 128.3 135 53.3
CSS0046514 Camellia sinensis var. sinensis HOM05D000257 ORTHO05D003333 7.1e-28 128.3 135 53.3
GSVIVG01009042001 Vitis vinifera HOM05D000257 ORTHO05D003333 9.3e-28 127.9 135 53.3
Haze_22284 Corylus avellana HOM05D000257 ORTHO05D003333 1.2e-27 127.5 135 54.8
Lalb_Chr08g0242101 Lupinus albus HOM05D000257 ORTHO05D003333 1.6e-27 127.1 109 63.3
Sed0021086 Sechium edule HOM05D000257 ORTHO05D003333 2.1e-27 126.7 135 54.1
TPR.G26146 Trifolium pratense HOM05D000257 ORTHO05D003333 2.1e-27 126.7 135 54.1
Phvul.009G031800 Phaseolus vulgaris HOM05D000257 ORTHO05D003333 2.7e-27 126.3 135 54.8
Cfa013647 Carpinus fangiana HOM05D000257 ORTHO05D003333 3.5e-27 125.9 135 54.1
ClCG11G014140 Citrullus lanatus HOM05D000257 ORTHO05D003333 3.5e-27 125.9 135 54.1
TWI56G0316 Tripterygium wilfordii HOM05D000257 ORTHO05D003333 6.0e-27 125.2 135 53.3
Oeu053212.1 Olea europaea HOM05D000257 ORTHO05D003333 7.9e-27 124.8 135 52.6
AL6G41600 Arabidopsis lyrata HOM05D000257 ORTHO05D003333 1.8e-26 123.6 135 53.3
MSTRG.24976 Avicennia marina HOM05D000257 ORTHO05D003333 1.8e-26 123.6 135 54.1
PGR042G2937 Punica granatum HOM05D000257 ORTHO05D003333 1.8e-26 123.6 105 61.9
TAR376G0347 Trochodendron aralioides HOM05D000257 ORTHO05D003333 1.8e-26 123.6 135 51.9
Cc10_g07080 Coffea canephora HOM05D000257 ORTHO05D003333 3.9e-26 122.5 135 52.6
CsaV3_3G047540 Cucumis sativus L. HOM05D000257 ORTHO05D003333 3.9e-26 122.5 135 54.1
PGSC0003DMG400031472 Solanum tuberosum HOM05D000257 ORTHO05D003333 3.9e-26 122.5 134 50.7
Ca_15254_v3 Cicer arietinum L. HOM05D000257 ORTHO05D003333 5.1e-26 122.1 135 52.6
Ca_30278_v3 Cicer arietinum L. HOM05D000257 ORTHO05D003333 5.1e-26 122.1 135 52.6
Duzib116G0164 Durio zibethinus HOM05D000257 ORTHO05D003333 6.7e-26 121.7 135 52.6
ECA247G3218 Erigeron canadensis HOM05D000257 ORTHO05D003333 6.7e-26 121.7 135 51.9
Potri.002G097900 Populus trichocarpa HOM05D000257 ORTHO05D003333 6.7e-26 121.7 135 52.6
Sp6g08770 Schrenkiella parvula HOM05D000257 ORTHO05D003333 6.7e-26 121.7 135 53.3
Atru.chr13.1172 Acer truncatum HOM05D000257 ORTHO05D003333 8.7e-26 121.3 105 59.0
Carub.0006s2754 Capsella rubella HOM05D000257 ORTHO05D003333 8.7e-26 121.3 135 51.9
MELO3C003570.2 Cucumis melo HOM05D000257 ORTHO05D003333 1.1e-25 120.9 105 61.9
Rhsim06G0080900 Rhododendron simsii HOM05D000257 ORTHO05D003333 1.1e-25 120.9 135 51.9
Sabra02G0076900 Salix brachista HOM05D000257 ORTHO05D003333 1.1e-25 120.9 135 52.6
Solyc04g074280.1 Solanum lycopersicum HOM05D000257 ORTHO05D003333 1.1e-25 120.9 134 50.7
THA.LOC109115979 Tarenaya hassleriana HOM05D000257 ORTHO05D003333 1.1e-25 120.9 104 61.5
AT4G08940 Arabidopsis thaliana HOM05D000257 ORTHO05D003333 1.5e-25 120.6 135 50.4
Nn5g30078 Nelumbo nucifera HOM05D000257 ORTHO05D003333 1.5e-25 120.6 135 51.9
Peaxi162Scf00392g00033 Petunia axillaris HOM05D000257 ORTHO05D003333 1.5e-25 120.6 134 50.0
SalBow7G3476 Salvia bowleyana HOM05D000257 ORTHO05D003333 1.5e-25 120.6 109 59.6
Thhalv10028699m.g Eutrema salsugineum HOM05D000257 ORTHO05D003333 1.9e-25 120.2 135 52.6
Sc01g0000500 Simmondsia chinensis HOM05D000257 ORTHO05D003333 2.5e-25 119.8 135 51.9
Medtr3g074730 Medicago truncatula HOM05D000257 ORTHO05D003333 3.3e-25 119.4 135 51.9
Thecc.08G105300 Theobroma cacao HOM05D000257 ORTHO05D003333 3.3e-25 119.4 135 51.1
HanXRQChr02g0043471 Helianthus annuus HOM05D000257 ORTHO05D003333 4.3e-25 119.0 135 53.3
Nitab4.5_0007108g0030 Nicotiana tabacum HOM05D000257 ORTHO05D003333 4.3e-25 119.0 134 50.0
Sopen04g029410 Solanum pennellii HOM05D000257 ORTHO05D003333 4.3e-25 119.0 134 50.0
Glyma.04G100900 Glycine max HOM05D000257 ORTHO05D003333 5.6e-25 118.6 105 61.9
Manes.18G066300 Manihot esculenta HOM05D000257 ORTHO05D003333 5.6e-25 118.6 135 51.1
unitig_748.g8209 Utricularia gibba HOM05D000257 ORTHO05D003333 5.6e-25 118.6 139 46.8
CAN.G193.31 Capsicum annuum HOM05D000257 ORTHO05D003333 7.4e-25 118.2 134 49.3
COL.COLO4_12055 Corchorus olitorius HOM05D000257 ORTHO05D003333 7.4e-25 118.2 104 60.6
DCAR_007578 Daucus carota HOM05D000257 ORTHO05D003333 7.4e-25 118.2 139 51.1
Lj4P725T15 Lonicera japonica HOM05D000257 ORTHO05D003333 7.4e-25 118.2 135 51.1
VMungo1309G2833 Vigna mungo HOM05D000257 ORTHO05D003333 1.3e-24 117.5 135 50.4
Ciclev10001417m.g Citrus clementina HOM05D000257 ORTHO05D003333 1.6e-24 117.1 105 60.0
Migut.E00939 Erythranthe guttata HOM05D000257 ORTHO05D003333 1.6e-24 117.1 135 51.9
CARHR259950 Cardamine hirsuta HOM05D000257 ORTHO05D003333 2.1e-24 116.7 135 49.6
Cpa.g.sc36.144 Carica papaya HOM05D000257 ORTHO05D003333 2.1e-24 116.7 135 50.4
Aqoxy5G01916 Aquilegia oxysepala HOM05D000257 ORTHO05D003333 4.8e-24 115.5 105 58.1
A09p29910 Brassica napus HOM05D000257 ORTHO05D003333 6.2e-24 115.2 145 48.3
BraA09t38551Z Brassica rapa HOM05D000257 ORTHO05D003333 6.2e-24 115.2 145 48.3
AUR62018930 Chenopodium quinoa HOM05D000257 ORTHO05D003333 1.1e-23 114.4 136 49.3
AUR62027774 Chenopodium quinoa HOM05D000257 ORTHO05D003333 1.4e-23 114.0 136 50.0
Glyma.06G102600 Glycine max HOM05D000257 ORTHO05D003333 1.4e-23 114.0 118 55.9
Nitab4.5_0000232g0060 Nicotiana tabacum HOM05D000257 ORTHO05D003333 1.8e-23 113.6 135 48.1
Ah.05g169870 Amaranthus hybridus HOM05D000257 ORTHO05D003333 2.4e-23 113.2 135 48.9
EL10Ac1g01204 Beta vulgaris HOM05D000257 ORTHO05D003333 3.1e-23 112.8 136 50.0
BcaB01g01366 Brassica carinata HOM05D000257 ORTHO05D003333 4.0e-23 112.5 135 49.6
BcaC04g20933 Brassica carinata HOM05D000257 ORTHO05D003333 4.0e-23 112.5 135 50.4
C09p37770 Brassica napus HOM05D000257 ORTHO05D003333 4.0e-23 112.5 135 50.4
BolC9t56610H Brassica oleracea HOM05D000257 ORTHO05D003333 4.0e-23 112.5 135 50.4
Gohir.A11G321600 Gossypium hirsutum HOM05D000257 ORTHO05D003333 4.0e-23 112.5 135 49.6
Gorai.007G370700 Gossypium raimondii HOM05D000257 ORTHO05D003333 9.0e-23 111.3 135 48.9
ATR0782G167 Amborella trichopoda HOM05D000257 ORTHO05D003333 2.6e-22 109.8 103 59.2
CDE05G2971 Ceratophyllum demersum HOM05D000257 ORTHO05D003333 3.4e-22 109.4 105 54.3
PSO210G1895 Papaver somniferum HOM05D000257 ORTHO05D003333 5.8e-22 108.6 101 59.4
SGA_v2.0_scaffold75G24993 Striga asiatica HOM05D000257 ORTHO05D003333 5.8e-22 108.6 105 53.3
SGA_v2.0_scaffold75G24995 Striga asiatica HOM05D005357 ORTHO05D006354 5.8e-22 108.6 105 53.3
SGA_v2.0_scaffold69G23015 Striga asiatica HOM05D000257 ORTHO05D003333 2.2e-21 106.7 105 52.4
PSO447G0353 Papaver somniferum HOM05D000257 ORTHO05D003333 4.9e-21 105.5 101 59.4
MBI05_g02440_MAGBIO Magnolia biondii HOM05D000257 ORTHO05D003333 2.5e-20 103.2 104 54.8
HPP92_011217 Vanilla planifolia HOM05D000257 ORTHO05D003333 4.2e-20 102.4 105 53.3
SHI17962 Sapria himalayana HOM05D000257 ORTHO05D003333 2.3e-18 96.7 136 44.9
AUR62002426 Chenopodium quinoa HOM05D002568 ORTHO05D002814 1.9e-17 93.6 120 49.2
Dinv14340 Davidia involucrata HOM05D000087 ORTHO05D001646 2.1e-16 90.1 111 50.5
Actinidia30782 Actinidia chinensis HOM05D000257 ORTHO05D003333 3.7e-16 89.4 128 42.2
Os09g0473400 Oryza sativa ssp. japonica HOM05D000257 ORTHO05D003333 1.8e-15 87.0 102 51.0
RcHm_v2.0_Chr7g0243921 Rosa chinensis HOM05D000257 ORTHO05D003333 2.1e-11 73.6 84 54.8
Zm00001eb101330 Zea mays HOM05D000257 ORTHO05D003333 2.7e-11 73.2 93 48.4
SEGI_04797 Sequoiadendron giganteum HOM05D000257 ORTHO05D003333 6.1e-11 72.0 105 44.8
PSO541G4726 Papaver somniferum HOM05D000257 ORTHO05D008466 2.0e-06 57.0 115 39.1
PGR102G0749 Punica granatum HOM05D000257 ORTHO05D008466 7.7e-06 55.1 117 34.2
A07p44250 Brassica napus HOM05D000257 ORTHO05D008466 1.0e-05 54.7 126 35.7
BraA07t31933Z Brassica rapa HOM05D000257 ORTHO05D008466 1.0e-05 54.7 126 35.7
Mapoly0022s0123 Marchantia polymorpha HOM05D000257 ORTHO05D003333 1.0e-05 54.7 132 31.8
PSO675G1115 Papaver somniferum HOM05D000257 ORTHO05D008466 1.0e-05 54.7 115 38.3


User provided reference genes

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