Gene: AT4G08940
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G08940
- Transcript Identifier AT4G08940.1
- Gene Type Coding gene
- Location Chr4 : 5730986-5732173 : negative
Gene Family Information
- ID HOM05D000257
- #Genes/#Species 1674/97
- Phylogenetic origin
- ID ORTHO05D003333
- #Genes/#Species 230/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT4G08940.1
- uniprot Q6NQB8
Descriptions
- Description Ubiquitin carboxyl-terminal hydrolase family protein
- Computational description Ubiquitin carboxyl-terminal hydrolase family protein; CONTAINS InterPro DOMAIN/s: RNA recognition domain, plant (InterPro:IPR021099); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase family protein (TAIR:AT4G01037.1); Has 405 Blast hits to 399 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 405; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006979 | IMP | Gene Ontology | response to oxidative stress | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | Gene Ontology | RNA binding | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0016787 | IEA | GOA Database | hydrolase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISM | Gene Ontology | chloroplast |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |